RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 FANCIQ9NVI1 1328 aa19.91■□□□□ 0.78
MBD1-217ENST00000588937 COL3A1P02461 1466 aaPredicted RBP19.9■□□□□ 0.78
MBD1-217ENST00000588937 ADGRB2O60241 1585 aa19.9■□□□□ 0.78
MBD1-217ENST00000588937 PNNQ9H307 717 aaKnown RBP19.89■□□□□ 0.77
MBD1-217ENST00000588937 CPSF1Q10570 1443 aaKnown RBP19.89■□□□□ 0.77
MBD1-217ENST00000588937 EDC4Q6P2E9 1401 aaKnown RBP19.89■□□□□ 0.77
MBD1-217ENST00000588937 PPIP5K1Q6PFW1 1433 aa19.89■□□□□ 0.77
MBD1-217ENST00000588937 PIK3R4Q99570 1358 aa19.88■□□□□ 0.77
MBD1-217ENST00000588937 PNPLA6Q8IY17 1366 aa19.87■□□□□ 0.77
MBD1-217ENST00000588937 NEUROD2Q15784 382 aa19.87■□□□□ 0.77
MBD1-217ENST00000588937 ANKLE2Q86XL3 938 aa19.87■□□□□ 0.77
MBD1-217ENST00000588937 CCDC61Q9Y6R9 512 aa19.86■□□□□ 0.77
MBD1-217ENST00000588937 CDC42BPGQ6DT37 1551 aa19.86■□□□□ 0.77
MBD1-217ENST00000588937 DIAPH1O60610 1272 aaKnown RBP19.85■□□□□ 0.77
MBD1-217ENST00000588937 NUDT16Q96DE0 195 aaKnown RBP19.85■□□□□ 0.77
MBD1-217ENST00000588937 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
MBD1-217ENST00000588937 U2SURPO15042 1029 aaKnown RBP19.85■□□□□ 0.77
MBD1-217ENST00000588937 C20orf194Q5TEA3 1177 aa19.85■□□□□ 0.77
MBD1-217ENST00000588937 RRP7AQ9Y3A4 280 aaKnown RBP19.85■□□□□ 0.77
MBD1-217ENST00000588937 MON2Q7Z3U7 1717 aa19.84■□□□□ 0.77
MBD1-217ENST00000588937 TCERG1O14776 1098 aaKnown RBP19.84■□□□□ 0.77
MBD1-217ENST00000588937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.84■□□□□ 0.77
MBD1-217ENST00000588937 MYH16Q9H6N6 1097 aa19.84■□□□□ 0.77
MBD1-217ENST00000588937 ITSN1Q15811 1721 aa19.84■□□□□ 0.77
MBD1-217ENST00000588937 MAPK8IP3Q9UPT6 1336 aa19.83■□□□□ 0.77
MBD1-217ENST00000588937 AKAP12Q02952 1782 aa19.83■□□□□ 0.76
MBD1-217ENST00000588937 ZNF692Q9BU19 519 aaPredicted RBP19.83■□□□□ 0.76
MBD1-217ENST00000588937 PTPRUQ92729 1446 aa19.82■□□□□ 0.76
MBD1-217ENST00000588937 PLEKHF1Q96S99 279 aa19.82■□□□□ 0.76
MBD1-217ENST00000588937 PTCH1Q13635 1447 aa19.81■□□□□ 0.76
MBD1-217ENST00000588937 XRN1Q8IZH2 1706 aaKnown RBP19.81■□□□□ 0.76
MBD1-217ENST00000588937 ROBO2Q9HCK4 1378 aa19.8■□□□□ 0.76
MBD1-217ENST00000588937 PDE3AQ14432 1141 aa19.8■□□□□ 0.76
MBD1-217ENST00000588937 SLC26A8Q96RN1 970 aa19.8■□□□□ 0.76
MBD1-217ENST00000588937 CHD2O14647 1828 aaKnown RBP19.79■□□□□ 0.76
MBD1-217ENST00000588937 BCAR3O75815 825 aa19.79■□□□□ 0.76
MBD1-217ENST00000588937 MAP2P11137 1827 aaKnown RBP19.79■□□□□ 0.76
MBD1-217ENST00000588937 MS4A1P11836 297 aa19.78■□□□□ 0.76
MBD1-217ENST00000588937 AATKQ6ZMQ8 1374 aa19.78■□□□□ 0.76
MBD1-217ENST00000588937 FCHSD2O94868 740 aa19.78■□□□□ 0.76
MBD1-217ENST00000588937 CT47B1P0C2W7 299 aaPredicted RBP19.78■□□□□ 0.76
MBD1-217ENST00000588937 TMPOP42166 694 aaKnown RBP19.78■□□□□ 0.76
MBD1-217ENST00000588937 CENPQQ7L2Z9 268 aaPredicted RBP19.78■□□□□ 0.76
MBD1-217ENST00000588937 POLKQ9UBT6 870 aa19.78■□□□□ 0.76
MBD1-217ENST00000588937 NEFMP07197 916 aa19.77■□□□□ 0.76
MBD1-217ENST00000588937 CANXP27824 592 aaKnown RBP19.77■□□□□ 0.76
MBD1-217ENST00000588937 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.77■□□□□ 0.75
MBD1-217ENST00000588937 COG3Q96JB2 828 aa19.76■□□□□ 0.75
MBD1-217ENST00000588937 NPHP4O75161 1426 aaPredicted RBP19.76■□□□□ 0.75
MBD1-217ENST00000588937 TOPAZ1Q8N9V7 1692 aa19.75■□□□□ 0.75
MBD1-217ENST00000588937 IL16Q14005 1332 aa19.75■□□□□ 0.75
MBD1-217ENST00000588937 AMOTL2Q9Y2J4 779 aa19.75■□□□□ 0.75
MBD1-217ENST00000588937 CDK12Q9NYV4 1490 aaPredicted RBP19.75■□□□□ 0.75
MBD1-217ENST00000588937 RARSP54136 660 aaKnown RBP19.75■□□□□ 0.75
MBD1-217ENST00000588937 KDM2BQ8NHM5 1336 aa19.74■□□□□ 0.75
MBD1-217ENST00000588937 NME9Q86XW9 330 aa19.73■□□□□ 0.75
MBD1-217ENST00000588937 PRR36Q9H6K5 1346 aa19.73■□□□□ 0.75
MBD1-217ENST00000588937 PPM1GO15355 546 aaPredicted RBP19.72■□□□□ 0.75
MBD1-217ENST00000588937 AAMPQ13685 434 aa19.72■□□□□ 0.75
MBD1-217ENST00000588937 PLEKHG3A1L390 1219 aa19.72■□□□□ 0.75
MBD1-217ENST00000588937 RIPK4P57078 832 aa19.71■□□□□ 0.75
MBD1-217ENST00000588937 TRIM35Q9UPQ4 493 aa19.71■□□□□ 0.75
MBD1-217ENST00000588937 LRRC7Q96NW7 1537 aa19.7■□□□□ 0.74
MBD1-217ENST00000588937 MYT1Q01538 1121 aa19.7■□□□□ 0.74
MBD1-217ENST00000588937 RSPH6AQ9H0K4 717 aa19.7■□□□□ 0.74
MBD1-217ENST00000588937 NRKQ7Z2Y5 1582 aa19.7■□□□□ 0.74
MBD1-217ENST00000588937 NCKAP5LQ9HCH0 1330 aa19.69■□□□□ 0.74
MBD1-217ENST00000588937 NWD1Q149M9 1564 aa19.68■□□□□ 0.74
MBD1-217ENST00000588937 EMILIN1Q9Y6C2 1016 aa19.67■□□□□ 0.74
MBD1-217ENST00000588937 ACEP12821 1306 aa19.67■□□□□ 0.74
MBD1-217ENST00000588937 TTC21BQ7Z4L5 1316 aa19.67■□□□□ 0.74
MBD1-217ENST00000588937 LMTK3Q96Q04 1460 aa19.67■□□□□ 0.74
MBD1-217ENST00000588937 PRKAR2BP31323 418 aa19.67■□□□□ 0.74
MBD1-217ENST00000588937 IL13P35225 146 aa19.67■□□□□ 0.74
MBD1-217ENST00000588937 FRAT1Q92837 279 aaPredicted RBP19.67■□□□□ 0.74
MBD1-217ENST00000588937 ANP32EQ9BTT0 268 aa19.66■□□□□ 0.74
MBD1-217ENST00000588937 USP6P35125 1406 aa19.65■□□□□ 0.74
MBD1-217ENST00000588937 KCNA6P17658 529 aa19.65■□□□□ 0.74
MBD1-217ENST00000588937 FBLN1P23142 703 aa19.65■□□□□ 0.74
MBD1-217ENST00000588937 ANP32AP39687 249 aaKnown RBP19.65■□□□□ 0.74
MBD1-217ENST00000588937 CALD1Q05682 793 aaKnown RBP19.65■□□□□ 0.74
MBD1-217ENST00000588937 ZRANB1Q9UGI0 708 aa19.65■□□□□ 0.74
MBD1-217ENST00000588937 PDE4AP27815 886 aa19.65■□□□□ 0.74
MBD1-217ENST00000588937 NFE2L2Q16236 605 aa19.64■□□□□ 0.73
MBD1-217ENST00000588937 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
MBD1-217ENST00000588937 CLUAP1Q96AJ1 413 aa19.64■□□□□ 0.73
MBD1-217ENST00000588937 MSH5O43196 834 aa19.63■□□□□ 0.73
MBD1-217ENST00000588937 PANK1Q8TE04 598 aa19.63■□□□□ 0.73
MBD1-217ENST00000588937 COG6Q9Y2V7 657 aa19.63■□□□□ 0.73
MBD1-217ENST00000588937 EXOSC9Q06265 439 aaKnown RBP19.62■□□□□ 0.73
MBD1-217ENST00000588937 TSR2Q969E8 191 aaKnown RBP19.62■□□□□ 0.73
MBD1-217ENST00000588937 BACH2Q9BYV9 841 aa19.62■□□□□ 0.73
MBD1-217ENST00000588937 TTC21AQ8NDW8 1320 aa19.62■□□□□ 0.73
MBD1-217ENST00000588937 OVOS2A0A0J9YW53 1432 aa19.62■□□□□ 0.73
MBD1-217ENST00000588937 OVOS2Q6IE36 1432 aa19.62■□□□□ 0.73
MBD1-217ENST00000588937 NALCNQ8IZF0 1738 aa19.62■□□□□ 0.73
MBD1-217ENST00000588937 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
MBD1-217ENST00000588937 LMOD3Q0VAK6 560 aa19.61■□□□□ 0.73
MBD1-217ENST00000588937 RRS1Q15050 365 aaKnown RBP19.61■□□□□ 0.73
MBD1-217ENST00000588937 ZKSCAN2Q63HK3 967 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms