RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 NUTM2AQ8IVF1 878 aaPredicted RBP20.15■□□□□ 0.82
CNN1-208ENST00000588935 ABTB2Q8N961 1025 aa20.15■□□□□ 0.82
CNN1-208ENST00000588935 NINLQ9Y2I6 1382 aa20.15■□□□□ 0.82
CNN1-208ENST00000588935 USP6P35125 1406 aa20.15■□□□□ 0.82
CNN1-208ENST00000588935 CPSF1Q10570 1443 aaKnown RBP20.15■□□□□ 0.82
CNN1-208ENST00000588935 MYOM1P52179 1685 aa20.15■□□□□ 0.82
CNN1-208ENST00000588935 TTC21BQ7Z4L5 1316 aa20.14■□□□□ 0.81
CNN1-208ENST00000588935 CABLES1Q8TDN4 633 aa20.14■□□□□ 0.81
CNN1-208ENST00000588935 SBNO1A3KN83 1393 aa20.13■□□□□ 0.81
CNN1-208ENST00000588935 ANKRD36BQ8N2N9 1353 aa20.13■□□□□ 0.81
CNN1-208ENST00000588935 CARD14Q9BXL6 1004 aa20.13■□□□□ 0.81
CNN1-208ENST00000588935 ZNF316A6NFI3 1004 aaPredicted RBP20.12■□□□□ 0.81
CNN1-208ENST00000588935 ZRANB1Q9UGI0 708 aa20.12■□□□□ 0.81
CNN1-208ENST00000588935 TRPM3Q9HCF6 1732 aaPredicted RBP20.12■□□□□ 0.81
CNN1-208ENST00000588935 TNS3Q68CZ2 1445 aa20.11■□□□□ 0.81
CNN1-208ENST00000588935 JCADQ9P266 1359 aa20.11■□□□□ 0.81
CNN1-208ENST00000588935 NLRP6P59044 892 aa20.11■□□□□ 0.81
CNN1-208ENST00000588935 NME9Q86XW9 330 aa20.11■□□□□ 0.81
CNN1-208ENST00000588935 PNPLA6Q8IY17 1366 aa20.1■□□□□ 0.81
CNN1-208ENST00000588935 HAP1P54257 671 aaPredicted RBP20.1■□□□□ 0.81
CNN1-208ENST00000588935 CNGB1Q14028 1251 aaPredicted RBP20.1■□□□□ 0.81
CNN1-208ENST00000588935 MON2Q7Z3U7 1717 aa20.1■□□□□ 0.81
CNN1-208ENST00000588935 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.81
CNN1-208ENST00000588935 SSH2Q76I76 1423 aa20.08■□□□□ 0.8
CNN1-208ENST00000588935 NSD3Q9BZ95 1437 aa20.08■□□□□ 0.8
CNN1-208ENST00000588935 SOX12O15370 315 aa20.07■□□□□ 0.8
CNN1-208ENST00000588935 EDC4Q6P2E9 1401 aaKnown RBP20.07■□□□□ 0.8
CNN1-208ENST00000588935 ARHGEF10O15013 1369 aa20.07■□□□□ 0.8
CNN1-208ENST00000588935 TTC21AQ8NDW8 1320 aa20.06■□□□□ 0.8
CNN1-208ENST00000588935 ADAMTS2O95450 1211 aa20.06■□□□□ 0.8
CNN1-208ENST00000588935 NLRP13Q86W25 1043 aa20.06■□□□□ 0.8
CNN1-208ENST00000588935 GGNBP2Q9H3C7 697 aa20.06■□□□□ 0.8
CNN1-208ENST00000588935 ALS2Q96Q42 1657 aa20.06■□□□□ 0.8
CNN1-208ENST00000588935 BRD4O60885 1362 aaPredicted RBP20.05■□□□□ 0.8
CNN1-208ENST00000588935 KNSTRNQ9Y448 316 aa20.04■□□□□ 0.8
CNN1-208ENST00000588935 SHPRHQ149N8 1683 aa20.03■□□□□ 0.8
CNN1-208ENST00000588935 ZBTB7CA1YPR0 619 aa20.03■□□□□ 0.8
CNN1-208ENST00000588935 FYB1O15117 783 aa20.03■□□□□ 0.8
CNN1-208ENST00000588935 MEX3CQ5U5Q3 659 aaKnown RBP20.03■□□□□ 0.8
CNN1-208ENST00000588935 NRKQ7Z2Y5 1582 aa20.03■□□□□ 0.8
CNN1-208ENST00000588935 PIK3C2AO00443 1686 aa20.02■□□□□ 0.8
CNN1-208ENST00000588935 SPATA31A6Q5VVP1 1343 aa20.02■□□□□ 0.79
CNN1-208ENST00000588935 ZC3H6P61129 1189 aaKnown RBP20.01■□□□□ 0.79
CNN1-208ENST00000588935 COG3Q96JB2 828 aa20.01■□□□□ 0.79
CNN1-208ENST00000588935 CGNL1Q0VF96 1302 aa20.01■□□□□ 0.79
CNN1-208ENST00000588935 FBLN1P23142 703 aa19.99■□□□□ 0.79
CNN1-208ENST00000588935 PER1O15534 1290 aaPredicted RBP19.98■□□□□ 0.79
CNN1-208ENST00000588935 GCP02774 474 aa19.98■□□□□ 0.79
CNN1-208ENST00000588935 CC2D1BQ5T0F9 858 aaKnown RBP19.98■□□□□ 0.79
CNN1-208ENST00000588935 MED1Q15648 1581 aaPredicted RBP19.98■□□□□ 0.79
CNN1-208ENST00000588935 COL22A1Q8NFW1 1626 aaPredicted RBP19.98■□□□□ 0.79
CNN1-208ENST00000588935 TNNT2P45379 298 aaPredicted RBP19.97■□□□□ 0.79
CNN1-208ENST00000588935 C8orf37Q96NL8 207 aa19.97■□□□□ 0.79
CNN1-208ENST00000588935 KIF20BQ96Q89 1820 aa19.97■□□□□ 0.79
CNN1-208ENST00000588935 LRP6O75581 1613 aa19.96■□□□□ 0.79
CNN1-208ENST00000588935 USP19O94966 1318 aa19.96■□□□□ 0.79
CNN1-208ENST00000588935 USP31Q70CQ4 1352 aa19.95■□□□□ 0.79
CNN1-208ENST00000588935 CHRNA2Q15822 529 aa19.95■□□□□ 0.78
CNN1-208ENST00000588935 NGLY1Q96IV0 654 aa19.95■□□□□ 0.78
CNN1-208ENST00000588935 MORC1Q86VD1 984 aa19.94■□□□□ 0.78
CNN1-208ENST00000588935 ABCA3Q99758 1704 aa19.93■□□□□ 0.78
CNN1-208ENST00000588935 MARF1Q9Y4F3 1742 aaKnown RBP19.93■□□□□ 0.78
CNN1-208ENST00000588935 FAM83GA6ND36 823 aa19.93■□□□□ 0.78
CNN1-208ENST00000588935 AMER1Q5JTC6 1135 aaPredicted RBP19.93■□□□□ 0.78
CNN1-208ENST00000588935 KCNH5Q8NCM2 988 aa19.93■□□□□ 0.78
CNN1-208ENST00000588935 PRDM11Q9NQV5 511 aa19.93■□□□□ 0.78
CNN1-208ENST00000588935 PHRF1Q9P1Y6 1649 aaKnown RBP19.92■□□□□ 0.78
CNN1-208ENST00000588935 CRYBG1Q9Y4K1 1723 aa19.92■□□□□ 0.78
CNN1-208ENST00000588935 KIAA0232Q92628 1395 aa19.92■□□□□ 0.78
CNN1-208ENST00000588935 OVOS2A0A0J9YW53 1432 aa19.91■□□□□ 0.78
CNN1-208ENST00000588935 OVOS2Q6IE36 1432 aa19.91■□□□□ 0.78
CNN1-208ENST00000588935 RRS1Q15050 365 aaKnown RBP19.89■□□□□ 0.77
CNN1-208ENST00000588935 PHF23Q9BUL5 403 aaPredicted RBP19.89■□□□□ 0.77
CNN1-208ENST00000588935 SLIT3O75094 1523 aa19.88■□□□□ 0.77
CNN1-208ENST00000588935 PPM1GO15355 546 aaPredicted RBP19.88■□□□□ 0.77
CNN1-208ENST00000588935 AFF2P51816 1311 aa19.87■□□□□ 0.77
CNN1-208ENST00000588935 ARHGEF25Q86VW2 580 aa19.86■□□□□ 0.77
CNN1-208ENST00000588935 BTG4Q9NY30 223 aa19.86■□□□□ 0.77
CNN1-208ENST00000588935 NSD2O96028 1365 aa19.85■□□□□ 0.77
CNN1-208ENST00000588935 USP54Q70EL1 1684 aa19.85■□□□□ 0.77
CNN1-208ENST00000588935 AMPHP49418 695 aa19.85■□□□□ 0.77
CNN1-208ENST00000588935 STRN4Q9NRL3 753 aa19.85■□□□□ 0.77
CNN1-208ENST00000588935 MAP2P11137 1827 aaKnown RBP19.85■□□□□ 0.77
CNN1-208ENST00000588935 ANKRD26Q9UPS8 1709 aa19.85■□□□□ 0.77
CNN1-208ENST00000588935 MAP3K19Q56UN5 1328 aa19.84■□□□□ 0.77
CNN1-208ENST00000588935 EVA1CP58658 441 aa19.84■□□□□ 0.77
CNN1-208ENST00000588935 USP21Q9UK80 565 aa19.84■□□□□ 0.77
CNN1-208ENST00000588935 NFAT5O94916 1531 aa19.83■□□□□ 0.77
CNN1-208ENST00000588935 AXIN2Q9Y2T1 843 aa19.83■□□□□ 0.77
CNN1-208ENST00000588935 EMILIN1Q9Y6C2 1016 aa19.83■□□□□ 0.77
CNN1-208ENST00000588935 LTN1O94822 1766 aa19.83■□□□□ 0.76
CNN1-208ENST00000588935 LTV1Q96GA3 475 aaPredicted RBP19.82■□□□□ 0.76
CNN1-208ENST00000588935 RGPD5Q99666 1765 aa19.82■□□□□ 0.76
CNN1-208ENST00000588935 CPDO75976 1380 aa19.82■□□□□ 0.76
CNN1-208ENST00000588935 CCDC9Q9Y3X0 531 aaKnown RBP19.81■□□□□ 0.76
CNN1-208ENST00000588935 COL14A1Q05707 1796 aaKnown RBP19.8■□□□□ 0.76
CNN1-208ENST00000588935 FNBP4Q8N3X1 1017 aaPredicted RBP19.8■□□□□ 0.76
CNN1-208ENST00000588935 POLKQ9UBT6 870 aa19.8■□□□□ 0.76
CNN1-208ENST00000588935 NPC1L1Q9UHC9 1359 aa19.8■□□□□ 0.76
CNN1-208ENST00000588935 CSB-PGBD3P0DP91 1061 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms