RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 MARF1Q9Y4F3 1742 aaKnown RBP24.59■■□□□ 1.53
DNMT1-215ENST00000588913 USP6P35125 1406 aa24.59■■□□□ 1.53
DNMT1-215ENST00000588913 SSH2Q76I76 1423 aa24.59■■□□□ 1.53
DNMT1-215ENST00000588913 ADAMTS2O95450 1211 aa24.59■■□□□ 1.53
DNMT1-215ENST00000588913 SLC12A5Q9H2X9 1139 aa24.59■■□□□ 1.53
DNMT1-215ENST00000588913 MON2Q7Z3U7 1717 aa24.59■■□□□ 1.53
DNMT1-215ENST00000588913 CPSF1Q10570 1443 aaKnown RBP24.58■■□□□ 1.53
DNMT1-215ENST00000588913 PAK3O75914 559 aaPredicted RBP24.58■■□□□ 1.53
DNMT1-215ENST00000588913 MYOM1P52179 1685 aa24.57■■□□□ 1.52
DNMT1-215ENST00000588913 NUTM2GQ5VZR2 741 aa24.57■■□□□ 1.52
DNMT1-215ENST00000588913 PIK3C2AO00443 1686 aa24.56■■□□□ 1.52
DNMT1-215ENST00000588913 ARHGEF10O15013 1369 aa24.55■■□□□ 1.52
DNMT1-215ENST00000588913 ILDR2Q71H61 639 aa24.54■■□□□ 1.52
DNMT1-215ENST00000588913 PHRF1Q9P1Y6 1649 aaKnown RBP24.54■■□□□ 1.52
DNMT1-215ENST00000588913 EIF4G2P78344 907 aaKnown RBP eCLIP24.54■■□□□ 1.52
DNMT1-215ENST00000588913 TMC1Q8TDI8 760 aa24.54■■□□□ 1.52
DNMT1-215ENST00000588913 TMF1P82094 1093 aa24.53■■□□□ 1.52
DNMT1-215ENST00000588913 MEX3CQ5U5Q3 659 aaKnown RBP24.53■■□□□ 1.52
DNMT1-215ENST00000588913 PHF23Q9BUL5 403 aaPredicted RBP24.53■■□□□ 1.52
DNMT1-215ENST00000588913 C11orf95C9JLR9 678 aaPredicted RBP24.52■■□□□ 1.52
DNMT1-215ENST00000588913 POTEAQ6S8J7 498 aa24.52■■□□□ 1.52
DNMT1-215ENST00000588913 C8orf37Q96NL8 207 aa24.52■■□□□ 1.52
DNMT1-215ENST00000588913 PUS7Q96PZ0 661 aaKnown RBP24.52■■□□□ 1.52
DNMT1-215ENST00000588913 A0A1W2PP64 1363 aa24.51■■□□□ 1.51
DNMT1-215ENST00000588913 KTN1Q86UP2 1357 aaKnown RBP24.49■■□□□ 1.51
DNMT1-215ENST00000588913 AFF2P51816 1311 aa24.49■■□□□ 1.51
DNMT1-215ENST00000588913 TTC21BQ7Z4L5 1316 aa24.48■■□□□ 1.51
DNMT1-215ENST00000588913 ABTB2Q8N961 1025 aa24.47■■□□□ 1.51
DNMT1-215ENST00000588913 ZRANB1Q9UGI0 708 aa24.47■■□□□ 1.51
DNMT1-215ENST00000588913 PLCH1Q4KWH8 1693 aa24.45■■□□□ 1.5
DNMT1-215ENST00000588913 ZNF692Q9BU19 519 aaPredicted RBP24.44■■□□□ 1.5
DNMT1-215ENST00000588913 USP19O94966 1318 aa24.44■■□□□ 1.5
DNMT1-215ENST00000588913 NGLY1Q96IV0 654 aa24.44■■□□□ 1.5
DNMT1-215ENST00000588913 BRD4O60885 1362 aaPredicted RBP24.43■■□□□ 1.5
DNMT1-215ENST00000588913 BCL9LQ86UU0 1499 aa24.43■■□□□ 1.5
DNMT1-215ENST00000588913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.42■■□□□ 1.5
DNMT1-215ENST00000588913 SLIT3O75094 1523 aa24.42■■□□□ 1.5
DNMT1-215ENST00000588913 SLIT2O94813 1529 aa24.42■■□□□ 1.5
DNMT1-215ENST00000588913 SLC24A1O60721 1099 aa24.42■■□□□ 1.5
DNMT1-215ENST00000588913 NME9Q86XW9 330 aa24.42■■□□□ 1.5
DNMT1-215ENST00000588913 FNBP4Q8N3X1 1017 aaPredicted RBP24.41■■□□□ 1.5
DNMT1-215ENST00000588913 NINLQ9Y2I6 1382 aa24.4■■□□□ 1.5
DNMT1-215ENST00000588913 FAM83GA6ND36 823 aa24.4■■□□□ 1.5
DNMT1-215ENST00000588913 HAP1P54257 671 aaPredicted RBP24.4■■□□□ 1.5
DNMT1-215ENST00000588913 ANKRD36BQ8N2N9 1353 aa24.4■■□□□ 1.5
DNMT1-215ENST00000588913 USP54Q70EL1 1684 aa24.4■■□□□ 1.5
DNMT1-215ENST00000588913 EDC4Q6P2E9 1401 aaKnown RBP24.4■■□□□ 1.5
DNMT1-215ENST00000588913 HDGFL2Q7Z4V5 671 aaPredicted RBP24.39■■□□□ 1.5
DNMT1-215ENST00000588913 POLR3GLQ9BT43 218 aa24.39■■□□□ 1.5
DNMT1-215ENST00000588913 NRAPQ86VF7 1730 aa24.39■■□□□ 1.5
DNMT1-215ENST00000588913 NLRP6P59044 892 aa24.39■■□□□ 1.49
DNMT1-215ENST00000588913 TERF2IPQ9NYB0 399 aa24.38■■□□□ 1.49
DNMT1-215ENST00000588913 KIAA0232Q92628 1395 aa24.38■■□□□ 1.49
DNMT1-215ENST00000588913 ZC3H6P61129 1189 aaKnown RBP24.37■■□□□ 1.49
DNMT1-215ENST00000588913 CARD14Q9BXL6 1004 aa24.37■■□□□ 1.49
DNMT1-215ENST00000588913 TTC21AQ8NDW8 1320 aa24.37■■□□□ 1.49
DNMT1-215ENST00000588913 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.36■■□□□ 1.49
DNMT1-215ENST00000588913 COL14A1Q05707 1796 aaKnown RBP24.36■■□□□ 1.49
DNMT1-215ENST00000588913 CDCA8Q53HL2 280 aa24.36■■□□□ 1.49
DNMT1-215ENST00000588913 NLRP13Q86W25 1043 aa24.36■■□□□ 1.49
DNMT1-215ENST00000588913 USP21Q9UK80 565 aa24.36■■□□□ 1.49
DNMT1-215ENST00000588913 NWD2Q9ULI1 1742 aa24.35■■□□□ 1.49
DNMT1-215ENST00000588913 CHRNA2Q15822 529 aa24.35■■□□□ 1.49
DNMT1-215ENST00000588913 NFAT5O94916 1531 aa24.35■■□□□ 1.49
DNMT1-215ENST00000588913 GCP02774 474 aa24.34■■□□□ 1.49
DNMT1-215ENST00000588913 ZNF772Q68DY9 489 aaPredicted RBP24.34■■□□□ 1.49
DNMT1-215ENST00000588913 KIF7Q2M1P5 1343 aa24.34■■□□□ 1.49
DNMT1-215ENST00000588913 ATRNO75882 1429 aa24.33■■□□□ 1.49
DNMT1-215ENST00000588913 USP31Q70CQ4 1352 aa24.33■■□□□ 1.49
DNMT1-215ENST00000588913 LMO7Q8WWI1 1683 aa24.33■■□□□ 1.49
DNMT1-215ENST00000588913 OVOS2A0A0J9YW53 1432 aa24.33■■□□□ 1.48
DNMT1-215ENST00000588913 OVOS2Q6IE36 1432 aa24.33■■□□□ 1.48
DNMT1-215ENST00000588913 QTRT2Q9H974 415 aaKnown RBP24.32■■□□□ 1.48
DNMT1-215ENST00000588913 COL18A1P39060 1754 aa24.31■■□□□ 1.48
DNMT1-215ENST00000588913 SOX12O15370 315 aa24.31■■□□□ 1.48
DNMT1-215ENST00000588913 KIF20BQ96Q89 1820 aa24.3■■□□□ 1.48
DNMT1-215ENST00000588913 PRDM11Q9NQV5 511 aa24.3■■□□□ 1.48
DNMT1-215ENST00000588913 CAMTA1Q9Y6Y1 1673 aa24.3■■□□□ 1.48
DNMT1-215ENST00000588913 GLI3P10071 1580 aa24.29■■□□□ 1.48
DNMT1-215ENST00000588913 NSD3Q9BZ95 1437 aa24.29■■□□□ 1.48
DNMT1-215ENST00000588913 BTG4Q9NY30 223 aa24.29■■□□□ 1.48
DNMT1-215ENST00000588913 CPDO75976 1380 aa24.29■■□□□ 1.48
DNMT1-215ENST00000588913 UNC5CLQ8IV45 518 aa24.29■■□□□ 1.48
DNMT1-215ENST00000588913 RGPD5Q99666 1765 aa24.28■■□□□ 1.48
DNMT1-215ENST00000588913 FYB1O15117 783 aa24.26■■□□□ 1.47
DNMT1-215ENST00000588913 FBLN1P23142 703 aa24.26■■□□□ 1.47
DNMT1-215ENST00000588913 WASHC2AQ641Q2 1341 aa24.26■■□□□ 1.47
DNMT1-215ENST00000588913 LTN1O94822 1766 aa24.26■■□□□ 1.47
DNMT1-215ENST00000588913 ZBTB7CA1YPR0 619 aa24.25■■□□□ 1.47
DNMT1-215ENST00000588913 GGNBP2Q9H3C7 697 aa24.25■■□□□ 1.47
DNMT1-215ENST00000588913 GTF3C3Q9Y5Q9 886 aa24.25■■□□□ 1.47
DNMT1-215ENST00000588913 PANK3Q9H999 370 aa24.24■■□□□ 1.47
DNMT1-215ENST00000588913 TRPC5Q9UL62 973 aaPredicted RBP24.24■■□□□ 1.47
DNMT1-215ENST00000588913 CCDC7Q96M83 1385 aa24.24■■□□□ 1.47
DNMT1-215ENST00000588913 RGS12O14924 1447 aa24.23■■□□□ 1.47
DNMT1-215ENST00000588913 ARHGEF25Q86VW2 580 aa24.23■■□□□ 1.47
DNMT1-215ENST00000588913 RXRBP28702 533 aa24.22■■□□□ 1.47
DNMT1-215ENST00000588913 AXIN2Q9Y2T1 843 aa24.22■■□□□ 1.47
DNMT1-215ENST00000588913 RBM6P78332 1123 aaKnown RBP24.21■■□□□ 1.47
DNMT1-215ENST00000588913 VPS72Q15906 364 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms