RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ARHGEF10O15013 1369 aa16.5■□□□□ 0.23
RFX1-204ENST00000588885 ARHGEF28Q8N1W1 1705 aaKnown RBP16.49■□□□□ 0.23
RFX1-204ENST00000588885 ACEP12821 1306 aa16.48■□□□□ 0.23
RFX1-204ENST00000588885 FAM83GA6ND36 823 aa16.48■□□□□ 0.23
RFX1-204ENST00000588885 UNC5CLQ8IV45 518 aa16.48■□□□□ 0.23
RFX1-204ENST00000588885 TONSLQ96HA7 1378 aa16.48■□□□□ 0.23
RFX1-204ENST00000588885 BCL9LQ86UU0 1499 aa16.48■□□□□ 0.23
RFX1-204ENST00000588885 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.48■□□□□ 0.23
RFX1-204ENST00000588885 ATAD2Q6PL18 1390 aa16.47■□□□□ 0.23
RFX1-204ENST00000588885 KIAA1210Q9ULL0 1709 aa16.47■□□□□ 0.23
RFX1-204ENST00000588885 ATP7BP35670 1465 aa16.47■□□□□ 0.23
RFX1-204ENST00000588885 PLEKHG3A1L390 1219 aa16.46■□□□□ 0.23
RFX1-204ENST00000588885 ATRNO75882 1429 aa16.45■□□□□ 0.22
RFX1-204ENST00000588885 GJD4Q96KN9 370 aaPredicted RBP16.45■□□□□ 0.22
RFX1-204ENST00000588885 CARD11Q9BXL7 1154 aa16.45■□□□□ 0.22
RFX1-204ENST00000588885 CABP1Q9NZU7 370 aa16.45■□□□□ 0.22
RFX1-204ENST00000588885 CCDC9Q9Y3X0 531 aaKnown RBP16.45■□□□□ 0.22
RFX1-204ENST00000588885 PLCH1Q4KWH8 1693 aa16.45■□□□□ 0.22
RFX1-204ENST00000588885 ITSN1Q15811 1721 aa16.44■□□□□ 0.22
RFX1-204ENST00000588885 ABCA3Q99758 1704 aa16.44■□□□□ 0.22
RFX1-204ENST00000588885 EVC2Q86UK5 1308 aa16.43■□□□□ 0.22
RFX1-204ENST00000588885 ABTB2Q8N961 1025 aa16.42■□□□□ 0.22
RFX1-204ENST00000588885 PPIP5K1Q6PFW1 1433 aa16.42■□□□□ 0.22
RFX1-204ENST00000588885 POLR3AO14802 1390 aaPredicted RBP16.41■□□□□ 0.22
RFX1-204ENST00000588885 SLIT2O94813 1529 aa16.41■□□□□ 0.22
RFX1-204ENST00000588885 BRWD3Q6RI45 1802 aa16.41■□□□□ 0.22
RFX1-204ENST00000588885 CCER1Q8TC90 406 aaPredicted RBP16.41■□□□□ 0.22
RFX1-204ENST00000588885 BTG4Q9NY30 223 aa16.41■□□□□ 0.22
RFX1-204ENST00000588885 NWD2Q9ULI1 1742 aa16.41■□□□□ 0.22
RFX1-204ENST00000588885 ZC3H6P61129 1189 aaKnown RBP16.4■□□□□ 0.22
RFX1-204ENST00000588885 TRPM1Q7Z4N2 1603 aa16.39■□□□□ 0.21
RFX1-204ENST00000588885 CHRNA2Q15822 529 aa16.39■□□□□ 0.21
RFX1-204ENST00000588885 VPS72Q15906 364 aa16.39■□□□□ 0.21
RFX1-204ENST00000588885 PRDM11Q9NQV5 511 aa16.39■□□□□ 0.21
RFX1-204ENST00000588885 A0A0G2JS52 829 aa16.38■□□□□ 0.21
RFX1-204ENST00000588885 MYT1Q01538 1121 aa16.38■□□□□ 0.21
RFX1-204ENST00000588885 TRPM3Q9HCF6 1732 aaPredicted RBP16.38■□□□□ 0.21
RFX1-204ENST00000588885 RALGAPBQ86X10 1494 aa16.37■□□□□ 0.21
RFX1-204ENST00000588885 SEPT12Q8IYM1 358 aa16.36■□□□□ 0.21
RFX1-204ENST00000588885 KIAA0232Q92628 1395 aa16.36■□□□□ 0.21
RFX1-204ENST00000588885 GLI3P10071 1580 aa16.35■□□□□ 0.21
RFX1-204ENST00000588885 QRICH2Q9H0J4 1663 aa16.35■□□□□ 0.21
RFX1-204ENST00000588885 ZBTB7CA1YPR0 619 aa16.35■□□□□ 0.21
RFX1-204ENST00000588885 STRN4Q9NRL3 753 aa16.35■□□□□ 0.21
RFX1-204ENST00000588885 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
RFX1-204ENST00000588885 NLRP6P59044 892 aa16.34■□□□□ 0.21
RFX1-204ENST00000588885 FAM98CQ17RN3 349 aaKnown RBP16.34■□□□□ 0.21
RFX1-204ENST00000588885 NLRP13Q86W25 1043 aa16.34■□□□□ 0.21
RFX1-204ENST00000588885 EP400Q96L91 3159 aa16.33■□□□□ 0.21
RFX1-204ENST00000588885 TMC1Q8TDI8 760 aa16.33■□□□□ 0.2
RFX1-204ENST00000588885 COL14A1Q05707 1796 aaKnown RBP16.33■□□□□ 0.2
RFX1-204ENST00000588885 SF3B2Q13435 895 aaKnown RBP16.32■□□□□ 0.2
RFX1-204ENST00000588885 TOPAZ1Q8N9V7 1692 aa16.31■□□□□ 0.2
RFX1-204ENST00000588885 ST20-MTHFSA0A0A6YYL1 179 aa16.31■□□□□ 0.2
RFX1-204ENST00000588885 GCP02774 474 aa16.31■□□□□ 0.2
RFX1-204ENST00000588885 EVA1CP58658 441 aa16.31■□□□□ 0.2
RFX1-204ENST00000588885 USP6P35125 1406 aa16.3■□□□□ 0.2
RFX1-204ENST00000588885 SOX12O15370 315 aa16.3■□□□□ 0.2
RFX1-204ENST00000588885 CCDC125Q86Z20 511 aa16.3■□□□□ 0.2
RFX1-204ENST00000588885 ZNF692Q9BU19 519 aaPredicted RBP16.3■□□□□ 0.2
RFX1-204ENST00000588885 USP35Q9P2H5 1018 aa16.3■□□□□ 0.2
RFX1-204ENST00000588885 NRAPQ86VF7 1730 aa16.3■□□□□ 0.2
RFX1-204ENST00000588885 USP19O94966 1318 aa16.29■□□□□ 0.2
RFX1-204ENST00000588885 SPATA31A5Q5VU36 1347 aa16.29■□□□□ 0.2
RFX1-204ENST00000588885 TTC21BQ7Z4L5 1316 aa16.29■□□□□ 0.2
RFX1-204ENST00000588885 SPATA31A7Q8IWB4 1347 aa16.29■□□□□ 0.2
RFX1-204ENST00000588885 ONECUT3O60422 494 aaPredicted RBP16.29■□□□□ 0.2
RFX1-204ENST00000588885 SLC12A5Q9H2X9 1139 aa16.29■□□□□ 0.2
RFX1-204ENST00000588885 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
RFX1-204ENST00000588885 CLSPNQ9HAW4 1339 aa16.28■□□□□ 0.2
RFX1-204ENST00000588885 KRT27Q7Z3Y8 459 aa16.28■□□□□ 0.2
RFX1-204ENST00000588885 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.28■□□□□ 0.2
RFX1-204ENST00000588885 CRYBG1Q9Y4K1 1723 aa16.27■□□□□ 0.19
RFX1-204ENST00000588885 PHRF1Q9P1Y6 1649 aaKnown RBP16.27■□□□□ 0.19
RFX1-204ENST00000588885 BRD4O60885 1362 aaPredicted RBP16.26■□□□□ 0.19
RFX1-204ENST00000588885 KTN1Q86UP2 1357 aaKnown RBP16.26■□□□□ 0.19
RFX1-204ENST00000588885 FAM182BQ5T319 152 aa16.26■□□□□ 0.19
RFX1-204ENST00000588885 LARP1Q6PKG0 1096 aaKnown RBP16.26■□□□□ 0.19
RFX1-204ENST00000588885 TESK2Q96S53 571 aa16.26■□□□□ 0.19
RFX1-204ENST00000588885 SSH2Q76I76 1423 aa16.26■□□□□ 0.19
RFX1-204ENST00000588885 SBNO2Q9Y2G9 1366 aa16.26■□□□□ 0.19
RFX1-204ENST00000588885 SPATA31A1Q5TZJ5 1347 aa16.25■□□□□ 0.19
RFX1-204ENST00000588885 BLMP54132 1417 aaPredicted RBP16.25■□□□□ 0.19
RFX1-204ENST00000588885 HDGFL2Q7Z4V5 671 aaPredicted RBP16.24■□□□□ 0.19
RFX1-204ENST00000588885 CPDO75976 1380 aa16.24■□□□□ 0.19
RFX1-204ENST00000588885 CPSF1Q10570 1443 aaKnown RBP16.23■□□□□ 0.19
RFX1-204ENST00000588885 NME9Q86XW9 330 aa16.23■□□□□ 0.19
RFX1-204ENST00000588885 RGPD1P0DJD0 1748 aa16.22■□□□□ 0.19
RFX1-204ENST00000588885 TTC21AQ8NDW8 1320 aa16.21■□□□□ 0.19
RFX1-204ENST00000588885 TERF2IPQ9NYB0 399 aa16.21■□□□□ 0.19
RFX1-204ENST00000588885 AXIN2Q9Y2T1 843 aa16.21■□□□□ 0.19
RFX1-204ENST00000588885 SRCAPQ6ZRS2 3230 aa16.21■□□□□ 0.19
RFX1-204ENST00000588885 CAMTA1Q9Y6Y1 1673 aa16.21■□□□□ 0.18
RFX1-204ENST00000588885 DEFB132Q7Z7B7 95 aa16.2■□□□□ 0.18
RFX1-204ENST00000588885 USP47Q96K76 1375 aa16.2■□□□□ 0.18
RFX1-204ENST00000588885 NRKQ7Z2Y5 1582 aa16.2■□□□□ 0.18
RFX1-204ENST00000588885 ARHGEF25Q86VW2 580 aa16.19■□□□□ 0.18
RFX1-204ENST00000588885 TCP11L2Q8N4U5 519 aa16.19■□□□□ 0.18
RFX1-204ENST00000588885 KCNH5Q8NCM2 988 aa16.19■□□□□ 0.18
RFX1-204ENST00000588885 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms