RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 FNBP4Q8N3X1 1017 aaPredicted RBP22.66■■□□□ 1.22
RETREG3-206ENST00000588423 TESK2Q96S53 571 aa22.66■■□□□ 1.22
RETREG3-206ENST00000588423 USP47Q96K76 1375 aa22.65■■□□□ 1.22
RETREG3-206ENST00000588423 ABCA3Q99758 1704 aa22.64■■□□□ 1.21
RETREG3-206ENST00000588423 HAP1P54257 671 aaPredicted RBP22.63■■□□□ 1.21
RETREG3-206ENST00000588423 USP6P35125 1406 aa22.63■■□□□ 1.21
RETREG3-206ENST00000588423 CABLES1Q8TDN4 633 aa22.62■■□□□ 1.21
RETREG3-206ENST00000588423 ZNF692Q9BU19 519 aaPredicted RBP22.62■■□□□ 1.21
RETREG3-206ENST00000588423 SOCS7O14512 581 aa22.61■■□□□ 1.21
RETREG3-206ENST00000588423 USP21Q9UK80 565 aa22.6■■□□□ 1.21
RETREG3-206ENST00000588423 CRYBG1Q9Y4K1 1723 aa22.6■■□□□ 1.21
RETREG3-206ENST00000588423 CPSF1Q10570 1443 aaKnown RBP22.59■■□□□ 1.21
RETREG3-206ENST00000588423 SSH2Q76I76 1423 aa22.59■■□□□ 1.21
RETREG3-206ENST00000588423 SLIT2O94813 1529 aa22.58■■□□□ 1.21
RETREG3-206ENST00000588423 QTRT2Q9H974 415 aaKnown RBP22.58■■□□□ 1.21
RETREG3-206ENST00000588423 BCL9LQ86UU0 1499 aa22.58■■□□□ 1.2
RETREG3-206ENST00000588423 RXRBP28702 533 aa22.57■■□□□ 1.2
RETREG3-206ENST00000588423 ABTB2Q8N961 1025 aa22.57■■□□□ 1.2
RETREG3-206ENST00000588423 NINLQ9Y2I6 1382 aa22.56■■□□□ 1.2
RETREG3-206ENST00000588423 TRPC5Q9UL62 973 aaPredicted RBP22.56■■□□□ 1.2
RETREG3-206ENST00000588423 ATRNO75882 1429 aa22.56■■□□□ 1.2
RETREG3-206ENST00000588423 AKAP12Q02952 1782 aa22.55■■□□□ 1.2
RETREG3-206ENST00000588423 CDK12Q9NYV4 1490 aaPredicted RBP22.55■■□□□ 1.2
RETREG3-206ENST00000588423 TMF1P82094 1093 aa22.55■■□□□ 1.2
RETREG3-206ENST00000588423 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.54■■□□□ 1.2
RETREG3-206ENST00000588423 PHRF1Q9P1Y6 1649 aaKnown RBP22.54■■□□□ 1.2
RETREG3-206ENST00000588423 PLEKHG5O94827 1062 aa22.54■■□□□ 1.2
RETREG3-206ENST00000588423 RBM6P78332 1123 aaKnown RBP22.54■■□□□ 1.2
RETREG3-206ENST00000588423 USP19O94966 1318 aa22.54■■□□□ 1.2
RETREG3-206ENST00000588423 NLRP13Q86W25 1043 aa22.53■■□□□ 1.2
RETREG3-206ENST00000588423 UNC5CLQ8IV45 518 aa22.53■■□□□ 1.2
RETREG3-206ENST00000588423 CD163L1Q9NR16 1453 aa22.53■■□□□ 1.2
RETREG3-206ENST00000588423 KTN1Q86UP2 1357 aaKnown RBP22.52■■□□□ 1.2
RETREG3-206ENST00000588423 NWD2Q9ULI1 1742 aa22.52■■□□□ 1.2
RETREG3-206ENST00000588423 NRKQ7Z2Y5 1582 aa22.52■■□□□ 1.2
RETREG3-206ENST00000588423 FAM83GA6ND36 823 aa22.52■■□□□ 1.2
RETREG3-206ENST00000588423 TTC21AQ8NDW8 1320 aa22.52■■□□□ 1.2
RETREG3-206ENST00000588423 CDCA8Q53HL2 280 aa22.51■■□□□ 1.19
RETREG3-206ENST00000588423 NUTM2GQ5VZR2 741 aa22.51■■□□□ 1.19
RETREG3-206ENST00000588423 TMC1Q8TDI8 760 aa22.51■■□□□ 1.19
RETREG3-206ENST00000588423 SLC12A5Q9H2X9 1139 aa22.51■■□□□ 1.19
RETREG3-206ENST00000588423 TTC21BQ7Z4L5 1316 aa22.51■■□□□ 1.19
RETREG3-206ENST00000588423 MON2Q7Z3U7 1717 aa22.51■■□□□ 1.19
RETREG3-206ENST00000588423 COL14A1Q05707 1796 aaKnown RBP22.5■■□□□ 1.19
RETREG3-206ENST00000588423 PLCH1Q4KWH8 1693 aa22.5■■□□□ 1.19
RETREG3-206ENST00000588423 HDGFL2Q7Z4V5 671 aaPredicted RBP22.5■■□□□ 1.19
RETREG3-206ENST00000588423 TERF2IPQ9NYB0 399 aa22.49■■□□□ 1.19
RETREG3-206ENST00000588423 PIK3C2AO00443 1686 aa22.49■■□□□ 1.19
RETREG3-206ENST00000588423 NLRP6P59044 892 aa22.47■■□□□ 1.19
RETREG3-206ENST00000588423 CPDO75976 1380 aa22.47■■□□□ 1.19
RETREG3-206ENST00000588423 KIAA0232Q92628 1395 aa22.47■■□□□ 1.19
RETREG3-206ENST00000588423 SLIT3O75094 1523 aa22.47■■□□□ 1.19
RETREG3-206ENST00000588423 GCP02774 474 aa22.46■■□□□ 1.19
RETREG3-206ENST00000588423 EIF4G2P78344 907 aaKnown RBP eCLIP22.46■■□□□ 1.19
RETREG3-206ENST00000588423 GJD4Q96KN9 370 aaPredicted RBP22.46■■□□□ 1.19
RETREG3-206ENST00000588423 PRDM11Q9NQV5 511 aa22.46■■□□□ 1.19
RETREG3-206ENST00000588423 A0A1W2PP64 1363 aa22.46■■□□□ 1.19
RETREG3-206ENST00000588423 EDC4Q6P2E9 1401 aaKnown RBP22.46■■□□□ 1.19
RETREG3-206ENST00000588423 VPS72Q15906 364 aa22.45■■□□□ 1.18
RETREG3-206ENST00000588423 RGS12O14924 1447 aa22.44■■□□□ 1.18
RETREG3-206ENST00000588423 BTG4Q9NY30 223 aa22.44■■□□□ 1.18
RETREG3-206ENST00000588423 NRAPQ86VF7 1730 aa22.43■■□□□ 1.18
RETREG3-206ENST00000588423 ANKRD36BQ8N2N9 1353 aa22.43■■□□□ 1.18
RETREG3-206ENST00000588423 ZC3H6P61129 1189 aaKnown RBP22.43■■□□□ 1.18
RETREG3-206ENST00000588423 USP31Q70CQ4 1352 aa22.42■■□□□ 1.18
RETREG3-206ENST00000588423 HSPA5P11021 654 aaKnown RBP22.41■■□□□ 1.18
RETREG3-206ENST00000588423 USP54Q70EL1 1684 aa22.41■■□□□ 1.18
RETREG3-206ENST00000588423 KCNH5Q8NCM2 988 aa22.4■■□□□ 1.18
RETREG3-206ENST00000588423 GLI3P10071 1580 aa22.4■■□□□ 1.18
RETREG3-206ENST00000588423 CHRNA2Q15822 529 aa22.39■■□□□ 1.17
RETREG3-206ENST00000588423 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.39■■□□□ 1.17
RETREG3-206ENST00000588423 LMO7Q8WWI1 1683 aa22.38■■□□□ 1.17
RETREG3-206ENST00000588423 NME9Q86XW9 330 aa22.36■■□□□ 1.17
RETREG3-206ENST00000588423 AATKQ6ZMQ8 1374 aa22.35■■□□□ 1.17
RETREG3-206ENST00000588423 MYOM1P52179 1685 aa22.34■■□□□ 1.17
RETREG3-206ENST00000588423 CAMTA1Q9Y6Y1 1673 aa22.34■■□□□ 1.17
RETREG3-206ENST00000588423 ONECUT3O60422 494 aaPredicted RBP22.34■■□□□ 1.17
RETREG3-206ENST00000588423 CCDC9Q9Y3X0 531 aaKnown RBP22.34■■□□□ 1.17
RETREG3-206ENST00000588423 NFAT5O94916 1531 aa22.34■■□□□ 1.17
RETREG3-206ENST00000588423 SPATA31A5Q5VU36 1347 aa22.33■■□□□ 1.17
RETREG3-206ENST00000588423 SPATA31A7Q8IWB4 1347 aa22.33■■□□□ 1.17
RETREG3-206ENST00000588423 OVOS2A0A0J9YW53 1432 aa22.33■■□□□ 1.17
RETREG3-206ENST00000588423 OVOS2Q6IE36 1432 aa22.33■■□□□ 1.17
RETREG3-206ENST00000588423 ARHGEF25Q86VW2 580 aa22.33■■□□□ 1.17
RETREG3-206ENST00000588423 ZRANB1Q9UGI0 708 aa22.32■■□□□ 1.16
RETREG3-206ENST00000588423 ABCC6O95255 1503 aa22.31■■□□□ 1.16
RETREG3-206ENST00000588423 COL5A2P05997 1499 aaPredicted RBP22.3■■□□□ 1.16
RETREG3-206ENST00000588423 EVA1CP58658 441 aa22.3■■□□□ 1.16
RETREG3-206ENST00000588423 STRN4Q9NRL3 753 aa22.29■■□□□ 1.16
RETREG3-206ENST00000588423 COL18A1P39060 1754 aa22.29■■□□□ 1.16
RETREG3-206ENST00000588423 SPATA31A1Q5TZJ5 1347 aa22.29■■□□□ 1.16
RETREG3-206ENST00000588423 SEPT12Q8IYM1 358 aa22.27■■□□□ 1.16
RETREG3-206ENST00000588423 COG3Q96JB2 828 aa22.27■■□□□ 1.16
RETREG3-206ENST00000588423 ZBTB7CA1YPR0 619 aa22.26■■□□□ 1.15
RETREG3-206ENST00000588423 SOX12O15370 315 aa22.26■■□□□ 1.15
RETREG3-206ENST00000588423 FYB1O15117 783 aa22.25■■□□□ 1.15
RETREG3-206ENST00000588423 FAM98CQ17RN3 349 aaKnown RBP22.25■■□□□ 1.15
RETREG3-206ENST00000588423 LARP1Q6PKG0 1096 aaKnown RBP22.25■■□□□ 1.15
RETREG3-206ENST00000588423 UPF1Q92900 1129 aaKnown RBP eCLIP22.25■■□□□ 1.15
RETREG3-206ENST00000588423 CARD14Q9BXL6 1004 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms