RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 COL14A1Q05707 1796 aaKnown RBP24.54■■□□□ 1.52
TMED1-203ENST00000588259 NRAPQ86VF7 1730 aa24.53■■□□□ 1.52
TMED1-203ENST00000588259 CDK19Q9BWU1 502 aa24.52■■□□□ 1.52
TMED1-203ENST00000588259 BTG4Q9NY30 223 aa24.52■■□□□ 1.52
TMED1-203ENST00000588259 CRYBG1Q9Y4K1 1723 aa24.5■■□□□ 1.51
TMED1-203ENST00000588259 ZRANB1Q9UGI0 708 aa24.5■■□□□ 1.51
TMED1-203ENST00000588259 PRDM11Q9NQV5 511 aa24.49■■□□□ 1.51
TMED1-203ENST00000588259 BLMP54132 1417 aaPredicted RBP24.49■■□□□ 1.51
TMED1-203ENST00000588259 TOPAZ1Q8N9V7 1692 aa24.49■■□□□ 1.51
TMED1-203ENST00000588259 SF3B2Q13435 895 aaKnown RBP24.48■■□□□ 1.51
TMED1-203ENST00000588259 NBPF1Q3BBV0 1214 aa24.48■■□□□ 1.51
TMED1-203ENST00000588259 FAM98CQ17RN3 349 aaKnown RBP24.47■■□□□ 1.51
TMED1-203ENST00000588259 NUTM2GQ5VZR2 741 aa24.46■■□□□ 1.51
TMED1-203ENST00000588259 KRT27Q7Z3Y8 459 aa24.46■■□□□ 1.51
TMED1-203ENST00000588259 PHRF1Q9P1Y6 1649 aaKnown RBP24.45■■□□□ 1.5
TMED1-203ENST00000588259 ACEP12821 1306 aa24.44■■□□□ 1.5
TMED1-203ENST00000588259 SRPK2P78362 688 aaKnown RBP24.44■■□□□ 1.5
TMED1-203ENST00000588259 QRICH2Q9H0J4 1663 aa24.43■■□□□ 1.5
TMED1-203ENST00000588259 CCDC61Q9Y6R9 512 aa24.43■■□□□ 1.5
TMED1-203ENST00000588259 KIAA0232Q92628 1395 aa24.42■■□□□ 1.5
TMED1-203ENST00000588259 CENPJQ9HC77 1338 aaPredicted RBP24.42■■□□□ 1.5
TMED1-203ENST00000588259 ONECUT3O60422 494 aaPredicted RBP24.42■■□□□ 1.5
TMED1-203ENST00000588259 CHRNA2Q15822 529 aa24.41■■□□□ 1.5
TMED1-203ENST00000588259 DEFB132Q7Z7B7 95 aa24.41■■□□□ 1.5
TMED1-203ENST00000588259 POLR3AO14802 1390 aaPredicted RBP24.41■■□□□ 1.5
TMED1-203ENST00000588259 ZC3H6P61129 1189 aaKnown RBP24.4■■□□□ 1.5
TMED1-203ENST00000588259 NBPF8Q3BBV2 869 aa24.4■■□□□ 1.5
TMED1-203ENST00000588259 STRN4Q9NRL3 753 aa24.39■■□□□ 1.49
TMED1-203ENST00000588259 SPATA31A5Q5VU36 1347 aa24.38■■□□□ 1.49
TMED1-203ENST00000588259 SPATA31A7Q8IWB4 1347 aa24.38■■□□□ 1.49
TMED1-203ENST00000588259 PPIP5K1Q6PFW1 1433 aa24.38■■□□□ 1.49
TMED1-203ENST00000588259 ABTB2Q8N961 1025 aa24.37■■□□□ 1.49
TMED1-203ENST00000588259 L3MBTL2Q969R5 705 aa24.37■■□□□ 1.49
TMED1-203ENST00000588259 CABP2Q9NPB3 220 aa24.37■■□□□ 1.49
TMED1-203ENST00000588259 PLEKHG3A1L390 1219 aa24.36■■□□□ 1.49
TMED1-203ENST00000588259 NEUROD1Q13562 356 aa24.36■■□□□ 1.49
TMED1-203ENST00000588259 NRKQ7Z2Y5 1582 aa24.34■■□□□ 1.49
TMED1-203ENST00000588259 SIN3AQ96ST3 1273 aa24.34■■□□□ 1.49
TMED1-203ENST00000588259 TRPM1Q7Z4N2 1603 aa24.33■■□□□ 1.49
TMED1-203ENST00000588259 FAM182BQ5T319 152 aa24.33■■□□□ 1.49
TMED1-203ENST00000588259 THSD7AQ9UPZ6 1657 aa24.33■■□□□ 1.49
TMED1-203ENST00000588259 EVA1CP58658 441 aa24.32■■□□□ 1.48
TMED1-203ENST00000588259 USP35Q9P2H5 1018 aa24.32■■□□□ 1.48
TMED1-203ENST00000588259 SRCAPQ6ZRS2 3230 aa24.31■■□□□ 1.48
TMED1-203ENST00000588259 BAG6P46379 1132 aa24.31■■□□□ 1.48
TMED1-203ENST00000588259 SPATA31A1Q5TZJ5 1347 aa24.31■■□□□ 1.48
TMED1-203ENST00000588259 RGPD1P0DJD0 1748 aa24.3■■□□□ 1.48
TMED1-203ENST00000588259 ROCK2O75116 1388 aaKnown RBP24.29■■□□□ 1.48
TMED1-203ENST00000588259 NLRP13Q86W25 1043 aa24.29■■□□□ 1.48
TMED1-203ENST00000588259 ZBTB7CA1YPR0 619 aa24.28■■□□□ 1.48
TMED1-203ENST00000588259 SSH2Q76I76 1423 aa24.27■■□□□ 1.48
TMED1-203ENST00000588259 CABP1Q9NZU7 370 aa24.27■■□□□ 1.48
TMED1-203ENST00000588259 USP19O94966 1318 aa24.27■■□□□ 1.48
TMED1-203ENST00000588259 EVC2Q86UK5 1308 aa24.27■■□□□ 1.48
TMED1-203ENST00000588259 USP6P35125 1406 aa24.25■■□□□ 1.47
TMED1-203ENST00000588259 CAMTA1Q9Y6Y1 1673 aa24.24■■□□□ 1.47
TMED1-203ENST00000588259 CPDO75976 1380 aa24.24■■□□□ 1.47
TMED1-203ENST00000588259 LMO7Q8WWI1 1683 aa24.24■■□□□ 1.47
TMED1-203ENST00000588259 GCP02774 474 aa24.23■■□□□ 1.47
TMED1-203ENST00000588259 TNS1Q9HBL0 1735 aaKnown RBP24.22■■□□□ 1.47
TMED1-203ENST00000588259 BRD4O60885 1362 aaPredicted RBP24.22■■□□□ 1.47
TMED1-203ENST00000588259 NLRP6P59044 892 aa24.22■■□□□ 1.47
TMED1-203ENST00000588259 EN1Q05925 392 aaPredicted RBP24.22■■□□□ 1.47
TMED1-203ENST00000588259 LARP1Q6PKG0 1096 aaKnown RBP24.22■■□□□ 1.47
TMED1-203ENST00000588259 PSDA5PKW4 1024 aaPredicted RBP24.2■■□□□ 1.46
TMED1-203ENST00000588259 PDE3BQ13370 1112 aa24.19■■□□□ 1.46
TMED1-203ENST00000588259 TCP11L2Q8N4U5 519 aa24.19■■□□□ 1.46
TMED1-203ENST00000588259 PIK3C2AO00443 1686 aa24.18■■□□□ 1.46
TMED1-203ENST00000588259 TRIM37O94972 964 aa24.18■■□□□ 1.46
TMED1-203ENST00000588259 FAM196AQ6ZSG2 479 aa24.18■■□□□ 1.46
TMED1-203ENST00000588259 BARGINQ6ZT62 677 aa24.17■■□□□ 1.46
TMED1-203ENST00000588259 COL5A2P05997 1499 aaPredicted RBP24.17■■□□□ 1.46
TMED1-203ENST00000588259 AKAP12Q02952 1782 aa24.16■■□□□ 1.46
TMED1-203ENST00000588259 SLIT3O75094 1523 aa24.15■■□□□ 1.46
TMED1-203ENST00000588259 SOX12O15370 315 aa24.14■■□□□ 1.45
TMED1-203ENST00000588259 DISP2A7MBM2 1401 aa24.13■■□□□ 1.45
TMED1-203ENST00000588259 CRB1P82279 1406 aa24.12■■□□□ 1.45
TMED1-203ENST00000588259 LRP5O75197 1615 aa24.11■■□□□ 1.45
TMED1-203ENST00000588259 APBA3O96018 575 aa24.11■■□□□ 1.45
TMED1-203ENST00000588259 EZH2Q15910 746 aaKnown RBP24.11■■□□□ 1.45
TMED1-203ENST00000588259 THRAP3Q9Y2W1 955 aaKnown RBP24.11■■□□□ 1.45
TMED1-203ENST00000588259 AATKQ6ZMQ8 1374 aa24.11■■□□□ 1.45
TMED1-203ENST00000588259 TTC21BQ7Z4L5 1316 aa24.1■■□□□ 1.45
TMED1-203ENST00000588259 PARP4Q9UKK3 1724 aaKnown RBP24.1■■□□□ 1.45
TMED1-203ENST00000588259 ZNF692Q9BU19 519 aaPredicted RBP24.1■■□□□ 1.45
TMED1-203ENST00000588259 CARD11Q9BXL7 1154 aa24.1■■□□□ 1.45
TMED1-203ENST00000588259 TONSLQ96HA7 1378 aa24.1■■□□□ 1.45
TMED1-203ENST00000588259 KTN1Q86UP2 1357 aaKnown RBP24.09■■□□□ 1.45
TMED1-203ENST00000588259 R3HDM1Q15032 1099 aaKnown RBP24.09■■□□□ 1.45
TMED1-203ENST00000588259 TOM1L2Q6ZVM7 507 aa24.09■■□□□ 1.45
TMED1-203ENST00000588259 CPSF1Q10570 1443 aaKnown RBP24.08■■□□□ 1.44
TMED1-203ENST00000588259 TTC21AQ8NDW8 1320 aa24.07■■□□□ 1.44
TMED1-203ENST00000588259 COL18A1P39060 1754 aa24.06■■□□□ 1.44
TMED1-203ENST00000588259 RGPD5Q99666 1765 aa24.06■■□□□ 1.44
TMED1-203ENST00000588259 KCNH5Q8NCM2 988 aa24.06■■□□□ 1.44
TMED1-203ENST00000588259 MON2Q7Z3U7 1717 aa24.06■■□□□ 1.44
TMED1-203ENST00000588259 CSB-PGBD3P0DP91 1061 aa24.05■■□□□ 1.44
TMED1-203ENST00000588259 LRRC37A3O60309 1634 aa24.05■■□□□ 1.44
TMED1-203ENST00000588259 TMC1Q8TDI8 760 aa24.04■■□□□ 1.44
TMED1-203ENST00000588259 CAMKK2Q96RR4 588 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms