RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 BRWD3Q6RI45 1802 aa19.37■□□□□ 0.69
PKN1-211ENST00000588200 PLEKHG3A1L390 1219 aa19.36■□□□□ 0.69
PKN1-211ENST00000588200 CCDC61Q9Y6R9 512 aa19.36■□□□□ 0.69
PKN1-211ENST00000588200 CDK19Q9BWU1 502 aa19.35■□□□□ 0.69
PKN1-211ENST00000588200 BLMP54132 1417 aaPredicted RBP19.34■□□□□ 0.69
PKN1-211ENST00000588200 NBPF1Q3BBV0 1214 aa19.33■□□□□ 0.68
PKN1-211ENST00000588200 SEPT12Q8IYM1 358 aa19.33■□□□□ 0.68
PKN1-211ENST00000588200 BRD4O60885 1362 aaPredicted RBP19.32■□□□□ 0.68
PKN1-211ENST00000588200 NBPF8Q3BBV2 869 aa19.31■□□□□ 0.68
PKN1-211ENST00000588200 BTG4Q9NY30 223 aa19.31■□□□□ 0.68
PKN1-211ENST00000588200 ACEP12821 1306 aa19.29■□□□□ 0.68
PKN1-211ENST00000588200 PHRF1Q9P1Y6 1649 aaKnown RBP19.29■□□□□ 0.68
PKN1-211ENST00000588200 CENPJQ9HC77 1338 aaPredicted RBP19.28■□□□□ 0.68
PKN1-211ENST00000588200 PAK3O75914 559 aaPredicted RBP19.28■□□□□ 0.68
PKN1-211ENST00000588200 KRT27Q7Z3Y8 459 aa19.28■□□□□ 0.68
PKN1-211ENST00000588200 SPATA31A5Q5VU36 1347 aa19.27■□□□□ 0.68
PKN1-211ENST00000588200 SPATA31A7Q8IWB4 1347 aa19.27■□□□□ 0.68
PKN1-211ENST00000588200 L3MBTL2Q969R5 705 aa19.27■□□□□ 0.68
PKN1-211ENST00000588200 ZRANB1Q9UGI0 708 aa19.26■□□□□ 0.67
PKN1-211ENST00000588200 CCDC9Q9Y3X0 531 aaKnown RBP19.26■□□□□ 0.67
PKN1-211ENST00000588200 THSD7AQ9UPZ6 1657 aa19.24■□□□□ 0.67
PKN1-211ENST00000588200 CPDO75976 1380 aa19.24■□□□□ 0.67
PKN1-211ENST00000588200 KIAA0232Q92628 1395 aa19.24■□□□□ 0.67
PKN1-211ENST00000588200 PRDM11Q9NQV5 511 aa19.24■□□□□ 0.67
PKN1-211ENST00000588200 TRPM1Q7Z4N2 1603 aa19.24■□□□□ 0.67
PKN1-211ENST00000588200 USP19O94966 1318 aa19.24■□□□□ 0.67
PKN1-211ENST00000588200 QRICH2Q9H0J4 1663 aa19.24■□□□□ 0.67
PKN1-211ENST00000588200 PLEKHG5O94827 1062 aa19.23■□□□□ 0.67
PKN1-211ENST00000588200 FAM98CQ17RN3 349 aaKnown RBP19.22■□□□□ 0.67
PKN1-211ENST00000588200 PPIP5K1Q6PFW1 1433 aa19.22■□□□□ 0.67
PKN1-211ENST00000588200 SPATA31A1Q5TZJ5 1347 aa19.21■□□□□ 0.67
PKN1-211ENST00000588200 NRKQ7Z2Y5 1582 aa19.2■□□□□ 0.66
PKN1-211ENST00000588200 SRPK2P78362 688 aaKnown RBP19.2■□□□□ 0.66
PKN1-211ENST00000588200 SF3B2Q13435 895 aaKnown RBP19.2■□□□□ 0.66
PKN1-211ENST00000588200 NLRP13Q86W25 1043 aa19.19■□□□□ 0.66
PKN1-211ENST00000588200 ABTB2Q8N961 1025 aa19.19■□□□□ 0.66
PKN1-211ENST00000588200 LMO7Q8WWI1 1683 aa19.19■□□□□ 0.66
PKN1-211ENST00000588200 SSH2Q76I76 1423 aa19.18■□□□□ 0.66
PKN1-211ENST00000588200 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
PKN1-211ENST00000588200 CABP2Q9NPB3 220 aa19.18■□□□□ 0.66
PKN1-211ENST00000588200 USP6P35125 1406 aa19.17■□□□□ 0.66
PKN1-211ENST00000588200 BARGINQ6ZT62 677 aa19.17■□□□□ 0.66
PKN1-211ENST00000588200 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
PKN1-211ENST00000588200 GCP02774 474 aa19.16■□□□□ 0.66
PKN1-211ENST00000588200 ZC3H6P61129 1189 aaKnown RBP19.16■□□□□ 0.66
PKN1-211ENST00000588200 DEFB132Q7Z7B7 95 aa19.16■□□□□ 0.66
PKN1-211ENST00000588200 CAMTA1Q9Y6Y1 1673 aa19.16■□□□□ 0.66
PKN1-211ENST00000588200 EVC2Q86UK5 1308 aa19.16■□□□□ 0.66
PKN1-211ENST00000588200 RGPD1P0DJD0 1748 aa19.16■□□□□ 0.66
PKN1-211ENST00000588200 CHRNA2Q15822 529 aa19.15■□□□□ 0.66
PKN1-211ENST00000588200 CABP1Q9NZU7 370 aa19.15■□□□□ 0.66
PKN1-211ENST00000588200 SBNO2Q9Y2G9 1366 aa19.15■□□□□ 0.66
PKN1-211ENST00000588200 ZNF692Q9BU19 519 aaPredicted RBP19.14■□□□□ 0.65
PKN1-211ENST00000588200 SLIT3O75094 1523 aa19.14■□□□□ 0.65
PKN1-211ENST00000588200 BAG6P46379 1132 aa19.13■□□□□ 0.65
PKN1-211ENST00000588200 NUTM2GQ5VZR2 741 aa19.13■□□□□ 0.65
PKN1-211ENST00000588200 THRAP3Q9Y2W1 955 aaKnown RBP19.13■□□□□ 0.65
PKN1-211ENST00000588200 ROCK2O75116 1388 aaKnown RBP19.13■□□□□ 0.65
PKN1-211ENST00000588200 A0A0G2JS52 829 aa19.12■□□□□ 0.65
PKN1-211ENST00000588200 MYT1Q01538 1121 aa19.12■□□□□ 0.65
PKN1-211ENST00000588200 AATKQ6ZMQ8 1374 aa19.1■□□□□ 0.65
PKN1-211ENST00000588200 EVA1CP58658 441 aa19.1■□□□□ 0.65
PKN1-211ENST00000588200 FAM196AQ6ZSG2 479 aa19.1■□□□□ 0.65
PKN1-211ENST00000588200 STRN4Q9NRL3 753 aa19.1■□□□□ 0.65
PKN1-211ENST00000588200 AKAP12Q02952 1782 aa19.1■□□□□ 0.65
PKN1-211ENST00000588200 TNS1Q9HBL0 1735 aaKnown RBP19.1■□□□□ 0.65
PKN1-211ENST00000588200 COL5A2P05997 1499 aaPredicted RBP19.09■□□□□ 0.65
PKN1-211ENST00000588200 CPSF1Q10570 1443 aaKnown RBP19.09■□□□□ 0.65
PKN1-211ENST00000588200 PIK3C2AO00443 1686 aa19.09■□□□□ 0.65
PKN1-211ENST00000588200 NEUROD1Q13562 356 aa19.09■□□□□ 0.65
PKN1-211ENST00000588200 NLRP6P59044 892 aa19.08■□□□□ 0.64
PKN1-211ENST00000588200 TCP11L2Q8N4U5 519 aa19.08■□□□□ 0.64
PKN1-211ENST00000588200 COL18A1P39060 1754 aa19.08■□□□□ 0.64
PKN1-211ENST00000588200 TTC21AQ8NDW8 1320 aa19.07■□□□□ 0.64
PKN1-211ENST00000588200 LARP1Q6PKG0 1096 aaKnown RBP19.07■□□□□ 0.64
PKN1-211ENST00000588200 PARP4Q9UKK3 1724 aaKnown RBP19.07■□□□□ 0.64
PKN1-211ENST00000588200 C11orf95C9JLR9 678 aaPredicted RBP19.06■□□□□ 0.64
PKN1-211ENST00000588200 PARD3Q8TEW0 1356 aa19.06■□□□□ 0.64
PKN1-211ENST00000588200 TTC21BQ7Z4L5 1316 aa19.05■□□□□ 0.64
PKN1-211ENST00000588200 LRP5O75197 1615 aa19.05■□□□□ 0.64
PKN1-211ENST00000588200 KCNH5Q8NCM2 988 aa19.05■□□□□ 0.64
PKN1-211ENST00000588200 CRB1P82279 1406 aa19.05■□□□□ 0.64
PKN1-211ENST00000588200 FAM182BQ5T319 152 aa19.04■□□□□ 0.64
PKN1-211ENST00000588200 PUS7Q96PZ0 661 aaKnown RBP19.04■□□□□ 0.64
PKN1-211ENST00000588200 EN1Q05925 392 aaPredicted RBP19.03■□□□□ 0.64
PKN1-211ENST00000588200 MON2Q7Z3U7 1717 aa19.03■□□□□ 0.64
PKN1-211ENST00000588200 USP54Q70EL1 1684 aa19.02■□□□□ 0.64
PKN1-211ENST00000588200 ABCC6O95255 1503 aa19.02■□□□□ 0.64
PKN1-211ENST00000588200 PDE3BQ13370 1112 aa19.02■□□□□ 0.64
PKN1-211ENST00000588200 ARHGEF25Q86VW2 580 aa19.02■□□□□ 0.64
PKN1-211ENST00000588200 CAMKK2Q96RR4 588 aa19.02■□□□□ 0.64
PKN1-211ENST00000588200 USP35Q9P2H5 1018 aa19.01■□□□□ 0.63
PKN1-211ENST00000588200 CARD11Q9BXL7 1154 aa19■□□□□ 0.63
PKN1-211ENST00000588200 USP31Q70CQ4 1352 aa19■□□□□ 0.63
PKN1-211ENST00000588200 WDR17Q8IZU2 1322 aa19■□□□□ 0.63
PKN1-211ENST00000588200 KTN1Q86UP2 1357 aaKnown RBP18.99■□□□□ 0.63
PKN1-211ENST00000588200 PEAK1Q9H792 1746 aa18.99■□□□□ 0.63
PKN1-211ENST00000588200 NFAT5O94916 1531 aa18.99■□□□□ 0.63
PKN1-211ENST00000588200 TRIM37O94972 964 aa18.98■□□□□ 0.63
PKN1-211ENST00000588200 CDCA7Q9BWT1 371 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms