RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 CCDC184Q52MB2 194 aa15.39■□□□□ 0.05
VMP1-207ENST00000588131 ESCO1Q5FWF5 840 aa15.39■□□□□ 0.05
VMP1-207ENST00000588131 NGDNQ8NEJ9 315 aaKnown RBP15.39■□□□□ 0.05
VMP1-207ENST00000588131 ORAI2Q96SN7 254 aa15.39■□□□□ 0.05
VMP1-207ENST00000588131 ZNF692Q9BU19 519 aaPredicted RBP15.39■□□□□ 0.05
VMP1-207ENST00000588131 SSH2Q76I76 1423 aa15.39■□□□□ 0.05
VMP1-207ENST00000588131 NSD2O96028 1365 aa15.38■□□□□ 0.05
VMP1-207ENST00000588131 CADPS2Q86UW7 1296 aa15.38■□□□□ 0.05
VMP1-207ENST00000588131 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.38■□□□□ 0.05
VMP1-207ENST00000588131 MYBBP1AQ9BQG0 1328 aaKnown RBP15.38■□□□□ 0.05
VMP1-207ENST00000588131 FYB1O15117 783 aa15.37■□□□□ 0.05
VMP1-207ENST00000588131 GGNBP2Q9H3C7 697 aa15.37■□□□□ 0.05
VMP1-207ENST00000588131 TTC21BQ7Z4L5 1316 aa15.37■□□□□ 0.05
VMP1-207ENST00000588131 NME9Q86XW9 330 aa15.36■□□□□ 0.05
VMP1-207ENST00000588131 PPP2R1AP30153 589 aa15.34■□□□□ 0.05
VMP1-207ENST00000588131 MORC1Q86VD1 984 aa15.34■□□□□ 0.05
VMP1-207ENST00000588131 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
VMP1-207ENST00000588131 PIK3C2AO00443 1686 aa15.34■□□□□ 0.05
VMP1-207ENST00000588131 TRPM3Q9HCF6 1732 aaPredicted RBP15.33■□□□□ 0.04
VMP1-207ENST00000588131 MRS2Q9HD23 443 aa15.32■□□□□ 0.04
VMP1-207ENST00000588131 TTC21AQ8NDW8 1320 aa15.32■□□□□ 0.04
VMP1-207ENST00000588131 BRD4O60885 1362 aaPredicted RBP15.32■□□□□ 0.04
VMP1-207ENST00000588131 MARF1Q9Y4F3 1742 aaKnown RBP15.31■□□□□ 0.04
VMP1-207ENST00000588131 FOXO3O43524 673 aa15.31■□□□□ 0.04
VMP1-207ENST00000588131 TNNT2P45379 298 aaPredicted RBP15.31■□□□□ 0.04
VMP1-207ENST00000588131 NLRP13Q86W25 1043 aa15.31■□□□□ 0.04
VMP1-207ENST00000588131 OVOS2A0A0J9YW53 1432 aa15.31■□□□□ 0.04
VMP1-207ENST00000588131 OVOS2Q6IE36 1432 aa15.31■□□□□ 0.04
VMP1-207ENST00000588131 XPCQ01831 940 aaPredicted RBP15.3■□□□□ 0.04
VMP1-207ENST00000588131 PSME1Q06323 249 aa15.3■□□□□ 0.04
VMP1-207ENST00000588131 USP54Q70EL1 1684 aa15.3■□□□□ 0.04
VMP1-207ENST00000588131 BRINP3Q76B58 766 aa15.3■□□□□ 0.04
VMP1-207ENST00000588131 SLAIN2Q9P270 581 aa15.3■□□□□ 0.04
VMP1-207ENST00000588131 DDX17Q92841 729 aaKnown RBP15.29■□□□□ 0.04
VMP1-207ENST00000588131 USP31Q70CQ4 1352 aa15.28■□□□□ 0.04
VMP1-207ENST00000588131 ILDR2Q71H61 639 aa15.28■□□□□ 0.04
VMP1-207ENST00000588131 KRT28Q7Z3Y7 464 aa15.28■□□□□ 0.04
VMP1-207ENST00000588131 COG3Q96JB2 828 aa15.28■□□□□ 0.04
VMP1-207ENST00000588131 PXDNQ92626 1479 aa15.27■□□□□ 0.04
VMP1-207ENST00000588131 PAK3O75914 559 aaPredicted RBP15.27■□□□□ 0.04
VMP1-207ENST00000588131 ALS2Q96Q42 1657 aa15.26■□□□□ 0.03
VMP1-207ENST00000588131 NHSL1Q5SYE7 1610 aa15.26■□□□□ 0.03
VMP1-207ENST00000588131 NPHP3Q7Z494 1330 aa15.25■□□□□ 0.03
VMP1-207ENST00000588131 FBLN1P23142 703 aa15.25■□□□□ 0.03
VMP1-207ENST00000588131 NUTM2GQ5VZR2 741 aa15.25■□□□□ 0.03
VMP1-207ENST00000588131 ABTB2Q8N961 1025 aa15.25■□□□□ 0.03
VMP1-207ENST00000588131 ROBO1Q9Y6N7 1651 aa15.25■□□□□ 0.03
VMP1-207ENST00000588131 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
VMP1-207ENST00000588131 MAP2P11137 1827 aaKnown RBP15.23■□□□□ 0.03
VMP1-207ENST00000588131 MTHFSP49914 203 aa15.23■□□□□ 0.03
VMP1-207ENST00000588131 NLRP6P59044 892 aa15.23■□□□□ 0.03
VMP1-207ENST00000588131 PNISRQ8TF01 805 aaKnown RBP15.23■□□□□ 0.03
VMP1-207ENST00000588131 SBNO1A3KN83 1393 aa15.23■□□□□ 0.03
VMP1-207ENST00000588131 SOCS7O14512 581 aa15.22■□□□□ 0.03
VMP1-207ENST00000588131 FAM9BQ8IZU0 186 aa15.22■□□□□ 0.03
VMP1-207ENST00000588131 YTHDC1Q96MU7 727 aaKnown RBP15.22■□□□□ 0.03
VMP1-207ENST00000588131 SMG6Q86US8 1419 aaKnown RBP15.22■□□□□ 0.03
VMP1-207ENST00000588131 SHPRHQ149N8 1683 aa15.22■□□□□ 0.03
VMP1-207ENST00000588131 COL3A1P02461 1466 aaPredicted RBP15.21■□□□□ 0.03
VMP1-207ENST00000588131 IQSEC2Q5JU85 1478 aa15.21■□□□□ 0.03
VMP1-207ENST00000588131 TNS3Q68CZ2 1445 aa15.21■□□□□ 0.03
VMP1-207ENST00000588131 POLKQ9UBT6 870 aa15.21■□□□□ 0.03
VMP1-207ENST00000588131 SLIT3O75094 1523 aa15.21■□□□□ 0.03
VMP1-207ENST00000588131 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
VMP1-207ENST00000588131 SOS2Q07890 1332 aaPredicted RBP15.2■□□□□ 0.02
VMP1-207ENST00000588131 SOX12O15370 315 aa15.2■□□□□ 0.02
VMP1-207ENST00000588131 RRS1Q15050 365 aaKnown RBP15.2■□□□□ 0.02
VMP1-207ENST00000588131 EMILIN1Q9Y6C2 1016 aa15.2■□□□□ 0.02
VMP1-207ENST00000588131 MED1Q15648 1581 aaPredicted RBP15.19■□□□□ 0.02
VMP1-207ENST00000588131 NFAT5O94916 1531 aa15.19■□□□□ 0.02
VMP1-207ENST00000588131 AHDC1Q5TGY3 1603 aaPredicted RBP15.19■□□□□ 0.02
VMP1-207ENST00000588131 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
VMP1-207ENST00000588131 SPATA31A3Q5VYP0 1347 aa15.18■□□□□ 0.02
VMP1-207ENST00000588131 CRYBG1Q9Y4K1 1723 aa15.18■□□□□ 0.02
VMP1-207ENST00000588131 CDK12Q9NYV4 1490 aaPredicted RBP15.18■□□□□ 0.02
VMP1-207ENST00000588131 USP19O94966 1318 aa15.17■□□□□ 0.02
VMP1-207ENST00000588131 PHRF1Q9P1Y6 1649 aaKnown RBP15.17■□□□□ 0.02
VMP1-207ENST00000588131 PNPLA6Q8IY17 1366 aa15.17■□□□□ 0.02
VMP1-207ENST00000588131 CERKQ8TCT0 537 aa15.17■□□□□ 0.02
VMP1-207ENST00000588131 PPM1GO15355 546 aaPredicted RBP15.16■□□□□ 0.02
VMP1-207ENST00000588131 TOM1O60784 492 aa15.16■□□□□ 0.02
VMP1-207ENST00000588131 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
VMP1-207ENST00000588131 CFAP53Q96M91 514 aa15.16■□□□□ 0.02
VMP1-207ENST00000588131 LTN1O94822 1766 aa15.16■□□□□ 0.02
VMP1-207ENST00000588131 MAP3K19Q56UN5 1328 aa15.16■□□□□ 0.02
VMP1-207ENST00000588131 INSRP06213 1382 aa15.15■□□□□ 0.02
VMP1-207ENST00000588131 ARHGEF10O15013 1369 aa15.14■□□□□ 0.01
VMP1-207ENST00000588131 UBAP1LF5GYI3 381 aa15.14■□□□□ 0.01
VMP1-207ENST00000588131 PIP4K2BP78356 416 aa15.14■□□□□ 0.01
VMP1-207ENST00000588131 PHLPP1O60346 1717 aa15.14■□□□□ 0.01
VMP1-207ENST00000588131 ABCA3Q99758 1704 aa15.14■□□□□ 0.01
VMP1-207ENST00000588131 WDR43Q15061 677 aaKnown RBP eCLIP15.13■□□□□ 0.01
VMP1-207ENST00000588131 KCNH5Q8NCM2 988 aa15.13■□□□□ 0.01
VMP1-207ENST00000588131 ADAMTS8Q9UP79 889 aa15.13■□□□□ 0.01
VMP1-207ENST00000588131 COL16A1Q07092 1604 aaPredicted RBP15.13■□□□□ 0.01
VMP1-207ENST00000588131 BLMP54132 1417 aaPredicted RBP15.12■□□□□ 0.01
VMP1-207ENST00000588131 GCP02774 474 aa15.12■□□□□ 0.01
VMP1-207ENST00000588131 CACNB1Q02641 598 aaPredicted RBP15.12■□□□□ 0.01
VMP1-207ENST00000588131 CABLES1Q8TDN4 633 aa15.12■□□□□ 0.01
VMP1-207ENST00000588131 DIAPH1O60610 1272 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms