RNA–Protein interactions for RNA: ENST00000588090.5

CIRBP-216, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-216	ENST00000588090	LMOD2	Q6P5Q4	547 aa		32.61	■■■□□ 2.81
CIRBP-216	ENST00000588090	TERF2IP	Q9NYB0	399 aa		32.61	■■■□□ 2.81
CIRBP-216	ENST00000588090	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.6	■■■□□ 2.81
CIRBP-216	ENST00000588090	KTN1	Q86UP2	1357 aa	Known RBP	32.59	■■■□□ 2.81
CIRBP-216	ENST00000588090	MYOM1	P52179	1685 aa		32.59	■■■□□ 2.81
CIRBP-216	ENST00000588090	LRP6	O75581	1613 aa		32.59	■■■□□ 2.81
CIRBP-216	ENST00000588090	NRK	Q7Z2Y5	1582 aa		32.59	■■■□□ 2.81
CIRBP-216	ENST00000588090	SSH2	Q76I76	1423 aa		32.58	■■■□□ 2.81
CIRBP-216	ENST00000588090	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.56	■■■□□ 2.8
CIRBP-216	ENST00000588090	NUTM2E	B1AL46	878 aa	Predicted RBP	32.56	■■■□□ 2.8
CIRBP-216	ENST00000588090	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.56	■■■□□ 2.8
CIRBP-216	ENST00000588090		A0A1W2PP64	1363 aa		32.56	■■■□□ 2.8
CIRBP-216	ENST00000588090	ABCA3	Q99758	1704 aa		32.55	■■■□□ 2.8
CIRBP-216	ENST00000588090	ANKRD36B	Q8N2N9	1353 aa		32.53	■■■□□ 2.8
CIRBP-216	ENST00000588090	ABTB2	Q8N961	1025 aa		32.52	■■■□□ 2.8
CIRBP-216	ENST00000588090	CRYBG1	Q9Y4K1	1723 aa		32.51	■■■□□ 2.8
CIRBP-216	ENST00000588090	POLR3GL	Q9BT43	218 aa		32.51	■■■□□ 2.79
CIRBP-216	ENST00000588090	MARF1	Q9Y4F3	1742 aa	Known RBP	32.51	■■■□□ 2.79
CIRBP-216	ENST00000588090	EDC4	Q6P2E9	1401 aa	Known RBP	32.51	■■■□□ 2.79
CIRBP-216	ENST00000588090	TTC21B	Q7Z4L5	1316 aa		32.51	■■■□□ 2.79
CIRBP-216	ENST00000588090	TTC21A	Q8NDW8	1320 aa		32.51	■■■□□ 2.79
CIRBP-216	ENST00000588090	MEX3C	Q5U5Q3	659 aa	Known RBP	32.5	■■■□□ 2.79
CIRBP-216	ENST00000588090	PIK3C2A	O00443	1686 aa		32.5	■■■□□ 2.79
CIRBP-216	ENST00000588090	HAP1	P54257	671 aa	Predicted RBP	32.48	■■■□□ 2.79
CIRBP-216	ENST00000588090	C11orf95	C9JLR9	678 aa	Predicted RBP	32.47	■■■□□ 2.79
CIRBP-216	ENST00000588090	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.46	■■■□□ 2.79
CIRBP-216	ENST00000588090	CABLES1	Q8TDN4	633 aa		32.46	■■■□□ 2.79
CIRBP-216	ENST00000588090	NLRP13	Q86W25	1043 aa		32.45	■■■□□ 2.79
CIRBP-216	ENST00000588090	ADAMTS2	O95450	1211 aa		32.44	■■■□□ 2.78
CIRBP-216	ENST00000588090	NUTM2G	Q5VZR2	741 aa		32.44	■■■□□ 2.78
CIRBP-216	ENST00000588090	PLEKHG5	O94827	1062 aa		32.43	■■■□□ 2.78
CIRBP-216	ENST00000588090	PHF23	Q9BUL5	403 aa	Predicted RBP	32.43	■■■□□ 2.78
CIRBP-216	ENST00000588090	KIF7	Q2M1P5	1343 aa		32.43	■■■□□ 2.78
CIRBP-216	ENST00000588090	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.42	■■■□□ 2.78
CIRBP-216	ENST00000588090	NLRP6	P59044	892 aa		32.41	■■■□□ 2.78
CIRBP-216	ENST00000588090	USP19	O94966	1318 aa		32.41	■■■□□ 2.78
CIRBP-216	ENST00000588090	USP54	Q70EL1	1684 aa		32.4	■■■□□ 2.78
CIRBP-216	ENST00000588090	C8orf37	Q96NL8	207 aa		32.38	■■■□□ 2.77
CIRBP-216	ENST00000588090	SLIT3	O75094	1523 aa		32.36	■■■□□ 2.77
CIRBP-216	ENST00000588090	USP31	Q70CQ4	1352 aa		32.36	■■■□□ 2.77
CIRBP-216	ENST00000588090	CCDC7	Q96M83	1385 aa		32.36	■■■□□ 2.77
CIRBP-216	ENST00000588090	NME9	Q86XW9	330 aa		32.34	■■■□□ 2.77
CIRBP-216	ENST00000588090	NGLY1	Q96IV0	654 aa		32.34	■■■□□ 2.77
CIRBP-216	ENST00000588090	KIF20B	Q96Q89	1820 aa		32.33	■■■□□ 2.77
CIRBP-216	ENST00000588090	WASHC2A	Q641Q2	1341 aa		32.32	■■■□□ 2.76
CIRBP-216	ENST00000588090	NSD3	Q9BZ95	1437 aa		32.32	■■■□□ 2.76
CIRBP-216	ENST00000588090	CARD14	Q9BXL6	1004 aa		32.31	■■■□□ 2.76
CIRBP-216	ENST00000588090	AFF2	P51816	1311 aa		32.31	■■■□□ 2.76
CIRBP-216	ENST00000588090	GC	P02774	474 aa		32.3	■■■□□ 2.76
CIRBP-216	ENST00000588090	COL14A1	Q05707	1796 aa	Known RBP	32.3	■■■□□ 2.76
CIRBP-216	ENST00000588090	OVOS2	A0A0J9YW53	1432 aa		32.29	■■■□□ 2.76
CIRBP-216	ENST00000588090	OVOS2	Q6IE36	1432 aa		32.29	■■■□□ 2.76
CIRBP-216	ENST00000588090	PLCH1	Q4KWH8	1693 aa		32.29	■■■□□ 2.76
CIRBP-216	ENST00000588090	KCNH5	Q8NCM2	988 aa		32.29	■■■□□ 2.76
CIRBP-216	ENST00000588090	PANK3	Q9H999	370 aa		32.29	■■■□□ 2.76
CIRBP-216	ENST00000588090	NWD2	Q9ULI1	1742 aa		32.28	■■■□□ 2.76
CIRBP-216	ENST00000588090	ZNF772	Q68DY9	489 aa	Predicted RBP	32.28	■■■□□ 2.76
CIRBP-216	ENST00000588090	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.28	■■■□□ 2.76
CIRBP-216	ENST00000588090	CPD	O75976	1380 aa		32.27	■■■□□ 2.76
CIRBP-216	ENST00000588090	KIAA0232	Q92628	1395 aa		32.26	■■■□□ 2.76
CIRBP-216	ENST00000588090	RGS17	Q9UGC6	210 aa	Predicted RBP	32.26	■■■□□ 2.75
CIRBP-216	ENST00000588090	ZRANB1	Q9UGI0	708 aa		32.26	■■■□□ 2.75
CIRBP-216	ENST00000588090	SLIT2	O94813	1529 aa		32.25	■■■□□ 2.75
CIRBP-216	ENST00000588090	PRDM11	Q9NQV5	511 aa		32.25	■■■□□ 2.75
CIRBP-216	ENST00000588090	ZC3H6	P61129	1189 aa	Known RBP	32.24	■■■□□ 2.75
CIRBP-216	ENST00000588090	COG3	Q96JB2	828 aa		32.24	■■■□□ 2.75
CIRBP-216	ENST00000588090	CGNL1	Q0VF96	1302 aa		32.24	■■■□□ 2.75
CIRBP-216	ENST00000588090	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.24	■■■□□ 2.75
CIRBP-216	ENST00000588090	FAM83G	A6ND36	823 aa		32.23	■■■□□ 2.75
CIRBP-216	ENST00000588090	FYB1	O15117	783 aa		32.23	■■■□□ 2.75
CIRBP-216	ENST00000588090	NFAT5	O94916	1531 aa		32.23	■■■□□ 2.75
CIRBP-216	ENST00000588090	USP21	Q9UK80	565 aa		32.22	■■■□□ 2.75
CIRBP-216	ENST00000588090	BCL9L	Q86UU0	1499 aa		32.2	■■■□□ 2.74
CIRBP-216	ENST00000588090	GGNBP2	Q9H3C7	697 aa		32.19	■■■□□ 2.74
CIRBP-216	ENST00000588090	SOX12	O15370	315 aa		32.18	■■■□□ 2.74
CIRBP-216	ENST00000588090	ANKRD26	Q9UPS8	1709 aa		32.18	■■■□□ 2.74
CIRBP-216	ENST00000588090	NRAP	Q86VF7	1730 aa		32.17	■■■□□ 2.74
CIRBP-216	ENST00000588090	LTN1	O94822	1766 aa		32.16	■■■□□ 2.74
CIRBP-216	ENST00000588090	LMO7	Q8WWI1	1683 aa		32.16	■■■□□ 2.74
CIRBP-216	ENST00000588090	CHRNA2	Q15822	529 aa		32.16	■■■□□ 2.74
CIRBP-216	ENST00000588090	UNC5CL	Q8IV45	518 aa		32.16	■■■□□ 2.74
CIRBP-216	ENST00000588090	KNSTRN	Q9Y448	316 aa		32.16	■■■□□ 2.74
CIRBP-216	ENST00000588090	BTG4	Q9NY30	223 aa		32.15	■■■□□ 2.74
CIRBP-216	ENST00000588090	NSD2	O96028	1365 aa		32.13	■■■□□ 2.73
CIRBP-216	ENST00000588090	AATK	Q6ZMQ8	1374 aa		32.13	■■■□□ 2.73
CIRBP-216	ENST00000588090	POTEA	Q6S8J7	498 aa		32.13	■■■□□ 2.73
CIRBP-216	ENST00000588090	ARHGEF25	Q86VW2	580 aa		32.13	■■■□□ 2.73
CIRBP-216	ENST00000588090	TRPC5	Q9UL62	973 aa	Predicted RBP	32.13	■■■□□ 2.73
CIRBP-216	ENST00000588090	ABCC6	O95255	1503 aa		32.12	■■■□□ 2.73
CIRBP-216	ENST00000588090	COL18A1	P39060	1754 aa		32.11	■■■□□ 2.73
CIRBP-216	ENST00000588090	ZBTB7C	A1YPR0	619 aa		32.11	■■■□□ 2.73
CIRBP-216	ENST00000588090	QTRT2	Q9H974	415 aa	Known RBP	32.11	■■■□□ 2.73
CIRBP-216	ENST00000588090	ATRN	O75882	1429 aa		32.11	■■■□□ 2.73
CIRBP-216	ENST00000588090	CAMTA1	Q9Y6Y1	1673 aa		32.09	■■■□□ 2.73
CIRBP-216	ENST00000588090	PER1	O15534	1290 aa	Predicted RBP	32.07	■■■□□ 2.72
CIRBP-216	ENST00000588090	RGPD5	Q99666	1765 aa		32.05	■■■□□ 2.72
CIRBP-216	ENST00000588090	VPS72	Q15906	364 aa		32.04	■■■□□ 2.72
CIRBP-216	ENST00000588090	RXRB	P28702	533 aa		32.03	■■■□□ 2.72
CIRBP-216	ENST00000588090	RBM6	P78332	1123 aa	Known RBP	32.03	■■■□□ 2.72
CIRBP-216	ENST00000588090	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.03	■■■□□ 2.72

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