RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-215	ENST00000588030	UNC5CL	Q8IV45	518 aa		28.01	■■■□□ 2.07
CIRBP-215	ENST00000588030	MARF1	Q9Y4F3	1742 aa	Known RBP	28.01	■■■□□ 2.07
CIRBP-215	ENST00000588030	FAM83G	A6ND36	823 aa		28	■■■□□ 2.07
CIRBP-215	ENST00000588030	EVC2	Q86UK5	1308 aa		28	■■■□□ 2.07
CIRBP-215	ENST00000588030	SLIT2	O94813	1529 aa		28	■■■□□ 2.07
CIRBP-215	ENST00000588030	ITSN1	Q15811	1721 aa		27.98	■■■□□ 2.07
CIRBP-215	ENST00000588030	RGS12	O14924	1447 aa		27.98	■■■□□ 2.07
CIRBP-215	ENST00000588030	ALS2	Q96Q42	1657 aa		27.98	■■■□□ 2.07
CIRBP-215	ENST00000588030	CABP1	Q9NZU7	370 aa		27.97	■■■□□ 2.07
CIRBP-215	ENST00000588030	GJD4	Q96KN9	370 aa	Predicted RBP	27.97	■■■□□ 2.07
CIRBP-215	ENST00000588030	PPIP5K1	Q6PFW1	1433 aa		27.96	■■■□□ 2.07
CIRBP-215	ENST00000588030	TOPAZ1	Q8N9V7	1692 aa		27.96	■■■□□ 2.07
CIRBP-215	ENST00000588030	UPF1	Q92900	1129 aa	Known RBP eCLIP	27.94	■■■□□ 2.06
CIRBP-215	ENST00000588030	NUTM2G	Q5VZR2	741 aa		27.93	■■■□□ 2.06
CIRBP-215	ENST00000588030	ST20-MTHFS	A0A0A6YYL1	179 aa		27.92	■■■□□ 2.06
CIRBP-215	ENST00000588030	ABCA3	Q99758	1704 aa		27.9	■■■□□ 2.06
CIRBP-215	ENST00000588030	ABTB2	Q8N961	1025 aa		27.89	■■■□□ 2.06
CIRBP-215	ENST00000588030	USP47	Q96K76	1375 aa		27.89	■■■□□ 2.05
CIRBP-215	ENST00000588030	VPS72	Q15906	364 aa		27.88	■■■□□ 2.05
CIRBP-215	ENST00000588030	SBNO2	Q9Y2G9	1366 aa		27.88	■■■□□ 2.05
CIRBP-215	ENST00000588030	BTG4	Q9NY30	223 aa		27.87	■■■□□ 2.05
CIRBP-215	ENST00000588030	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.85	■■■□□ 2.05
CIRBP-215	ENST00000588030	PRDM11	Q9NQV5	511 aa		27.83	■■■□□ 2.05
CIRBP-215	ENST00000588030	ZC3H6	P61129	1189 aa	Known RBP	27.82	■■■□□ 2.04
CIRBP-215	ENST00000588030	TESK2	Q96S53	571 aa		27.82	■■■□□ 2.04
CIRBP-215	ENST00000588030	BRD4	O60885	1362 aa	Predicted RBP	27.82	■■■□□ 2.04
CIRBP-215	ENST00000588030	CRYBG1	Q9Y4K1	1723 aa		27.82	■■■□□ 2.04
CIRBP-215	ENST00000588030	ATAD2	Q6PL18	1390 aa		27.82	■■■□□ 2.04
CIRBP-215	ENST00000588030	NLRP13	Q86W25	1043 aa		27.82	■■■□□ 2.04
CIRBP-215	ENST00000588030	USP6	P35125	1406 aa		27.81	■■■□□ 2.04
CIRBP-215	ENST00000588030	GLI3	P10071	1580 aa		27.81	■■■□□ 2.04
CIRBP-215	ENST00000588030	KIAA0232	Q92628	1395 aa		27.81	■■■□□ 2.04
CIRBP-215	ENST00000588030	CCDC9	Q9Y3X0	531 aa	Known RBP	27.81	■■■□□ 2.04
CIRBP-215	ENST00000588030	ONECUT3	O60422	494 aa	Predicted RBP	27.8	■■■□□ 2.04
CIRBP-215	ENST00000588030	CHRNA2	Q15822	529 aa		27.8	■■■□□ 2.04
CIRBP-215	ENST00000588030	ZNF692	Q9BU19	519 aa	Predicted RBP	27.8	■■■□□ 2.04
CIRBP-215	ENST00000588030	PLCH1	Q4KWH8	1693 aa		27.8	■■■□□ 2.04
CIRBP-215	ENST00000588030	SSH2	Q76I76	1423 aa		27.8	■■■□□ 2.04
CIRBP-215	ENST00000588030	USP19	O94966	1318 aa		27.8	■■■□□ 2.04
CIRBP-215	ENST00000588030	NWD2	Q9ULI1	1742 aa		27.8	■■■□□ 2.04
CIRBP-215	ENST00000588030	TMC1	Q8TDI8	760 aa		27.79	■■■□□ 2.04
CIRBP-215	ENST00000588030	GC	P02774	474 aa		27.77	■■■□□ 2.04
CIRBP-215	ENST00000588030	NLRP6	P59044	892 aa		27.77	■■■□□ 2.04
CIRBP-215	ENST00000588030	SEPT12	Q8IYM1	358 aa		27.77	■■■□□ 2.04
CIRBP-215	ENST00000588030	COL14A1	Q05707	1796 aa	Known RBP	27.76	■■■□□ 2.04
CIRBP-215	ENST00000588030	TTC21B	Q7Z4L5	1316 aa		27.75	■■■□□ 2.03
CIRBP-215	ENST00000588030	CPSF1	Q10570	1443 aa	Known RBP	27.74	■■■□□ 2.03
CIRBP-215	ENST00000588030	TMF1	P82094	1093 aa		27.72	■■■□□ 2.03
CIRBP-215	ENST00000588030	SLC12A5	Q9H2X9	1139 aa		27.72	■■■□□ 2.03
CIRBP-215	ENST00000588030	PHRF1	Q9P1Y6	1649 aa	Known RBP	27.72	■■■□□ 2.03
CIRBP-215	ENST00000588030	SLC24A1	O60721	1099 aa		27.72	■■■□□ 2.03
CIRBP-215	ENST00000588030	SPATA31A5	Q5VU36	1347 aa		27.72	■■■□□ 2.03
CIRBP-215	ENST00000588030	SPATA31A7	Q8IWB4	1347 aa		27.72	■■■□□ 2.03
CIRBP-215	ENST00000588030	PUS7	Q96PZ0	661 aa	Known RBP	27.72	■■■□□ 2.03
CIRBP-215	ENST00000588030	NRAP	Q86VF7	1730 aa		27.71	■■■□□ 2.03
CIRBP-215	ENST00000588030	CPD	O75976	1380 aa		27.71	■■■□□ 2.03
CIRBP-215	ENST00000588030	FAM98C	Q17RN3	349 aa	Known RBP	27.7	■■■□□ 2.02
CIRBP-215	ENST00000588030	KTN1	Q86UP2	1357 aa	Known RBP	27.68	■■■□□ 2.02
CIRBP-215	ENST00000588030	STRN4	Q9NRL3	753 aa		27.68	■■■□□ 2.02
CIRBP-215	ENST00000588030	NRK	Q7Z2Y5	1582 aa		27.67	■■■□□ 2.02
CIRBP-215	ENST00000588030	TTC21A	Q8NDW8	1320 aa		27.67	■■■□□ 2.02
CIRBP-215	ENST00000588030	EIF4G2	P78344	907 aa	Known RBP eCLIP	27.67	■■■□□ 2.02
CIRBP-215	ENST00000588030	AKAP12	Q02952	1782 aa		27.66	■■■□□ 2.02
CIRBP-215	ENST00000588030	EVA1C	P58658	441 aa		27.66	■■■□□ 2.02
CIRBP-215	ENST00000588030	CD163L1	Q9NR16	1453 aa		27.65	■■■□□ 2.02
CIRBP-215	ENST00000588030	HSPA5	P11021	654 aa	Known RBP	27.65	■■■□□ 2.02
CIRBP-215	ENST00000588030	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	27.65	■■■□□ 2.02
CIRBP-215	ENST00000588030	SPATA31A1	Q5TZJ5	1347 aa		27.64	■■■□□ 2.02
CIRBP-215	ENST00000588030	KRT27	Q7Z3Y8	459 aa		27.64	■■■□□ 2.02
CIRBP-215	ENST00000588030	CAMTA1	Q9Y6Y1	1673 aa		27.64	■■■□□ 2.02
CIRBP-215	ENST00000588030	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	27.63	■■■□□ 2.01
CIRBP-215	ENST00000588030	TERF2IP	Q9NYB0	399 aa		27.62	■■■□□ 2.01
CIRBP-215	ENST00000588030	ZRANB1	Q9UGI0	708 aa		27.62	■■■□□ 2.01
CIRBP-215	ENST00000588030	PIK3C2A	O00443	1686 aa		27.62	■■■□□ 2.01
CIRBP-215	ENST00000588030	SLIT3	O75094	1523 aa		27.62	■■■□□ 2.01
CIRBP-215	ENST00000588030		A0A0G2JS52	829 aa		27.62	■■■□□ 2.01
CIRBP-215	ENST00000588030	MYT1	Q01538	1121 aa		27.62	■■■□□ 2.01
CIRBP-215	ENST00000588030	LARP1	Q6PKG0	1096 aa	Known RBP	27.62	■■■□□ 2.01
CIRBP-215	ENST00000588030	CDCA8	Q53HL2	280 aa		27.61	■■■□□ 2.01
CIRBP-215	ENST00000588030	EP400	Q96L91	3159 aa		27.6	■■■□□ 2.01
CIRBP-215	ENST00000588030		A0A1W2PP64	1363 aa		27.6	■■■□□ 2.01
CIRBP-215	ENST00000588030	BRWD3	Q6RI45	1802 aa		27.6	■■■□□ 2.01
CIRBP-215	ENST00000588030	ZBTB7C	A1YPR0	619 aa		27.6	■■■□□ 2.01
CIRBP-215	ENST00000588030	CCDC125	Q86Z20	511 aa		27.6	■■■□□ 2.01
CIRBP-215	ENST00000588030	POLR3GL	Q9BT43	218 aa		27.6	■■■□□ 2.01
CIRBP-215	ENST00000588030	MON2	Q7Z3U7	1717 aa		27.59	■■■□□ 2.01
CIRBP-215	ENST00000588030	AATK	Q6ZMQ8	1374 aa		27.58	■■■□□ 2.01
CIRBP-215	ENST00000588030	ARHGEF25	Q86VW2	580 aa		27.58	■■■□□ 2.01
CIRBP-215	ENST00000588030	NME9	Q86XW9	330 aa		27.58	■■■□□ 2.01
CIRBP-215	ENST00000588030	KCNH5	Q8NCM2	988 aa		27.58	■■■□□ 2.01
CIRBP-215	ENST00000588030	USP35	Q9P2H5	1018 aa		27.58	■■■□□ 2.01
CIRBP-215	ENST00000588030	NINL	Q9Y2I6	1382 aa		27.58	■■■□□ 2.01
CIRBP-215	ENST00000588030	LMO7	Q8WWI1	1683 aa		27.57	■■■□□ 2
CIRBP-215	ENST00000588030	SOX12	O15370	315 aa		27.57	■■■□□ 2
CIRBP-215	ENST00000588030	AXIN2	Q9Y2T1	843 aa		27.57	■■■□□ 2
CIRBP-215	ENST00000588030	USP31	Q70CQ4	1352 aa		27.55	■■■□□ 2
CIRBP-215	ENST00000588030	BARGIN	Q6ZT62	677 aa		27.54	■■■□□ 2
CIRBP-215	ENST00000588030	TCP11L2	Q8N4U5	519 aa		27.52	■■■□□ 2
CIRBP-215	ENST00000588030	EDC4	Q6P2E9	1401 aa	Known RBP	27.52	■■■□□ 2
CIRBP-215	ENST00000588030	COL5A2	P05997	1499 aa	Predicted RBP	27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms