RNA–Protein interactions for RNA: ENST00000588027.5

LINC00662-204, long intergenic non-protein coding RNA 662, humanhuman

TSL 5 BASIC

Gene LINC00662, Length 562 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-204ENST00000588027 COL14A1Q05707 1796 aaKnown RBP17.51■□□□□ 0.39
LINC00662-204ENST00000588027 NBPF8Q3BBV2 869 aa17.5■□□□□ 0.39
LINC00662-204ENST00000588027 CCDC125Q86Z20 511 aa17.5■□□□□ 0.39
LINC00662-204ENST00000588027 NUDT16Q96DE0 195 aaKnown RBP17.5■□□□□ 0.39
LINC00662-204ENST00000588027 CCDC9Q9Y3X0 531 aaKnown RBP17.5■□□□□ 0.39
LINC00662-204ENST00000588027 PAK3O75914 559 aaPredicted RBP17.49■□□□□ 0.39
LINC00662-204ENST00000588027 NBPF1Q3BBV0 1214 aa17.49■□□□□ 0.39
LINC00662-204ENST00000588027 NRAPQ86VF7 1730 aa17.49■□□□□ 0.39
LINC00662-204ENST00000588027 CRYBG1Q9Y4K1 1723 aa17.48■□□□□ 0.39
LINC00662-204ENST00000588027 CDK19Q9BWU1 502 aa17.48■□□□□ 0.39
LINC00662-204ENST00000588027 POLR3AO14802 1390 aaPredicted RBP17.48■□□□□ 0.39
LINC00662-204ENST00000588027 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
LINC00662-204ENST00000588027 CCDC61Q9Y6R9 512 aa17.46■□□□□ 0.39
LINC00662-204ENST00000588027 BLMP54132 1417 aaPredicted RBP17.46■□□□□ 0.39
LINC00662-204ENST00000588027 FAM83GA6ND36 823 aa17.45■□□□□ 0.38
LINC00662-204ENST00000588027 SEPT12Q8IYM1 358 aa17.45■□□□□ 0.38
LINC00662-204ENST00000588027 PRDM11Q9NQV5 511 aa17.45■□□□□ 0.38
LINC00662-204ENST00000588027 PHRF1Q9P1Y6 1649 aaKnown RBP17.45■□□□□ 0.38
LINC00662-204ENST00000588027 A0A0G2JS52 829 aa17.44■□□□□ 0.38
LINC00662-204ENST00000588027 MYT1Q01538 1121 aa17.44■□□□□ 0.38
LINC00662-204ENST00000588027 BTG4Q9NY30 223 aa17.44■□□□□ 0.38
LINC00662-204ENST00000588027 QRICH2Q9H0J4 1663 aa17.44■□□□□ 0.38
LINC00662-204ENST00000588027 SRPK2P78362 688 aaKnown RBP17.43■□□□□ 0.38
LINC00662-204ENST00000588027 ACEP12821 1306 aa17.43■□□□□ 0.38
LINC00662-204ENST00000588027 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
LINC00662-204ENST00000588027 PLEKHG3A1L390 1219 aa17.42■□□□□ 0.38
LINC00662-204ENST00000588027 SF3B2Q13435 895 aaKnown RBP17.42■□□□□ 0.38
LINC00662-204ENST00000588027 BRWD3Q6RI45 1802 aa17.42■□□□□ 0.38
LINC00662-204ENST00000588027 BRD4O60885 1362 aaPredicted RBP17.41■□□□□ 0.38
LINC00662-204ENST00000588027 ROCK2O75116 1388 aaKnown RBP17.41■□□□□ 0.38
LINC00662-204ENST00000588027 TRPM1Q7Z4N2 1603 aa17.41■□□□□ 0.38
LINC00662-204ENST00000588027 ONECUT3O60422 494 aaPredicted RBP17.41■□□□□ 0.38
LINC00662-204ENST00000588027 KRT27Q7Z3Y8 459 aa17.41■□□□□ 0.38
LINC00662-204ENST00000588027 KIAA0232Q92628 1395 aa17.4■□□□□ 0.38
LINC00662-204ENST00000588027 NRKQ7Z2Y5 1582 aa17.4■□□□□ 0.38
LINC00662-204ENST00000588027 ZRANB1Q9UGI0 708 aa17.4■□□□□ 0.38
LINC00662-204ENST00000588027 EP400Q96L91 3159 aa17.4■□□□□ 0.38
LINC00662-204ENST00000588027 FAM98CQ17RN3 349 aaKnown RBP17.38■□□□□ 0.37
LINC00662-204ENST00000588027 CARD11Q9BXL7 1154 aa17.38■□□□□ 0.37
LINC00662-204ENST00000588027 SPATA31A5Q5VU36 1347 aa17.38■□□□□ 0.37
LINC00662-204ENST00000588027 SPATA31A7Q8IWB4 1347 aa17.38■□□□□ 0.37
LINC00662-204ENST00000588027 EVC2Q86UK5 1308 aa17.37■□□□□ 0.37
LINC00662-204ENST00000588027 THSD7AQ9UPZ6 1657 aa17.36■□□□□ 0.37
LINC00662-204ENST00000588027 ABTB2Q8N961 1025 aa17.36■□□□□ 0.37
LINC00662-204ENST00000588027 USP19O94966 1318 aa17.36■□□□□ 0.37
LINC00662-204ENST00000588027 NUTM2GQ5VZR2 741 aa17.35■□□□□ 0.37
LINC00662-204ENST00000588027 CABP2Q9NPB3 220 aa17.35■□□□□ 0.37
LINC00662-204ENST00000588027 CPDO75976 1380 aa17.35■□□□□ 0.37
LINC00662-204ENST00000588027 USP6P35125 1406 aa17.34■□□□□ 0.37
LINC00662-204ENST00000588027 NLRP13Q86W25 1043 aa17.34■□□□□ 0.37
LINC00662-204ENST00000588027 SSH2Q76I76 1423 aa17.33■□□□□ 0.36
LINC00662-204ENST00000588027 ZC3H6P61129 1189 aaKnown RBP17.33■□□□□ 0.36
LINC00662-204ENST00000588027 CHRNA2Q15822 529 aa17.33■□□□□ 0.36
LINC00662-204ENST00000588027 SPATA31A1Q5TZJ5 1347 aa17.32■□□□□ 0.36
LINC00662-204ENST00000588027 BAG6P46379 1132 aa17.32■□□□□ 0.36
LINC00662-204ENST00000588027 STRN4Q9NRL3 753 aa17.32■□□□□ 0.36
LINC00662-204ENST00000588027 RGPD1P0DJD0 1748 aa17.32■□□□□ 0.36
LINC00662-204ENST00000588027 LMO7Q8WWI1 1683 aa17.31■□□□□ 0.36
LINC00662-204ENST00000588027 SLIT3O75094 1523 aa17.3■□□□□ 0.36
LINC00662-204ENST00000588027 EVA1CP58658 441 aa17.29■□□□□ 0.36
LINC00662-204ENST00000588027 DEFB132Q7Z7B7 95 aa17.29■□□□□ 0.36
LINC00662-204ENST00000588027 CABP1Q9NZU7 370 aa17.29■□□□□ 0.36
LINC00662-204ENST00000588027 SBNO2Q9Y2G9 1366 aa17.28■□□□□ 0.36
LINC00662-204ENST00000588027 CAMTA1Q9Y6Y1 1673 aa17.27■□□□□ 0.36
LINC00662-204ENST00000588027 GCP02774 474 aa17.27■□□□□ 0.36
LINC00662-204ENST00000588027 BARGINQ6ZT62 677 aa17.27■□□□□ 0.36
LINC00662-204ENST00000588027 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
LINC00662-204ENST00000588027 COL5A2P05997 1499 aaPredicted RBP17.26■□□□□ 0.35
LINC00662-204ENST00000588027 NLRP6P59044 892 aa17.26■□□□□ 0.35
LINC00662-204ENST00000588027 DISP2A7MBM2 1401 aa17.26■□□□□ 0.35
LINC00662-204ENST00000588027 ZNF692Q9BU19 519 aaPredicted RBP17.25■□□□□ 0.35
LINC00662-204ENST00000588027 USP35Q9P2H5 1018 aa17.25■□□□□ 0.35
LINC00662-204ENST00000588027 THRAP3Q9Y2W1 955 aaKnown RBP17.25■□□□□ 0.35
LINC00662-204ENST00000588027 TTC21AQ8NDW8 1320 aa17.24■□□□□ 0.35
LINC00662-204ENST00000588027 FAM196AQ6ZSG2 479 aa17.24■□□□□ 0.35
LINC00662-204ENST00000588027 TCP11L2Q8N4U5 519 aa17.24■□□□□ 0.35
LINC00662-204ENST00000588027 AKAP12Q02952 1782 aa17.24■□□□□ 0.35
LINC00662-204ENST00000588027 AATKQ6ZMQ8 1374 aa17.24■□□□□ 0.35
LINC00662-204ENST00000588027 TNS1Q9HBL0 1735 aaKnown RBP17.24■□□□□ 0.35
LINC00662-204ENST00000588027 CRB1P82279 1406 aa17.23■□□□□ 0.35
LINC00662-204ENST00000588027 ST20-MTHFSA0A0A6YYL1 179 aa17.23■□□□□ 0.35
LINC00662-204ENST00000588027 LARP1Q6PKG0 1096 aaKnown RBP17.23■□□□□ 0.35
LINC00662-204ENST00000588027 CPSF1Q10570 1443 aaKnown RBP17.22■□□□□ 0.35
LINC00662-204ENST00000588027 ZBTB7CA1YPR0 619 aa17.22■□□□□ 0.35
LINC00662-204ENST00000588027 PDE3BQ13370 1112 aa17.22■□□□□ 0.35
LINC00662-204ENST00000588027 USP47Q96K76 1375 aa17.22■□□□□ 0.35
LINC00662-204ENST00000588027 KTN1Q86UP2 1357 aaKnown RBP17.21■□□□□ 0.35
LINC00662-204ENST00000588027 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
LINC00662-204ENST00000588027 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
LINC00662-204ENST00000588027 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.34
LINC00662-204ENST00000588027 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
LINC00662-204ENST00000588027 FAM182BQ5T319 152 aa17.2■□□□□ 0.34
LINC00662-204ENST00000588027 MON2Q7Z3U7 1717 aa17.2■□□□□ 0.34
LINC00662-204ENST00000588027 ABCC6O95255 1503 aa17.2■□□□□ 0.34
LINC00662-204ENST00000588027 LRP5O75197 1615 aa17.19■□□□□ 0.34
LINC00662-204ENST00000588027 C11orf95C9JLR9 678 aaPredicted RBP17.19■□□□□ 0.34
LINC00662-204ENST00000588027 SLC24A1O60721 1099 aa17.19■□□□□ 0.34
LINC00662-204ENST00000588027 TESK2Q96S53 571 aa17.19■□□□□ 0.34
LINC00662-204ENST00000588027 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC00662-204ENST00000588027 EN1Q05925 392 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms