RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 CHMP5Q9NZZ3 219 aa19.23■□□□□ 0.67
PTPRS-205ENST00000588012 CNKSR2Q8WXI2 1034 aa19.23■□□□□ 0.67
PTPRS-205ENST00000588012 SLC3A2P08195 630 aaKnown RBP19.22■□□□□ 0.67
PTPRS-205ENST00000588012 NUCB2P80303 420 aa19.22■□□□□ 0.67
PTPRS-205ENST00000588012 CCDC73Q6ZRK6 1079 aa19.22■□□□□ 0.67
PTPRS-205ENST00000588012 CNNM1Q9NRU3 951 aa19.22■□□□□ 0.67
PTPRS-205ENST00000588012 SYNJ1O43426 1573 aa19.22■□□□□ 0.67
PTPRS-205ENST00000588012 MTMR7Q9Y216 660 aa19.22■□□□□ 0.67
PTPRS-205ENST00000588012 TTC39AQ5SRH9 613 aa19.22■□□□□ 0.67
PTPRS-205ENST00000588012 DDX54Q8TDD1 881 aaKnown RBP19.22■□□□□ 0.67
PTPRS-205ENST00000588012 ERBINQ96RT1 1412 aa19.21■□□□□ 0.67
PTPRS-205ENST00000588012 SASS6Q6UVJ0 657 aa19.21■□□□□ 0.67
PTPRS-205ENST00000588012 C22orf23Q9BZE7 217 aa19.21■□□□□ 0.67
PTPRS-205ENST00000588012 GNL3LQ9NVN8 582 aaKnown RBP19.21■□□□□ 0.67
PTPRS-205ENST00000588012 RPGRIP1LQ68CZ1 1315 aa19.21■□□□□ 0.67
PTPRS-205ENST00000588012 ARAP1Q96P48 1450 aa19.21■□□□□ 0.67
PTPRS-205ENST00000588012 HIP1O00291 1037 aa19.21■□□□□ 0.67
PTPRS-205ENST00000588012 EXOSC9Q06265 439 aaKnown RBP19.21■□□□□ 0.67
PTPRS-205ENST00000588012 SULT6B1Q6IMI4 303 aa19.21■□□□□ 0.67
PTPRS-205ENST00000588012 RAPGEF3O95398 923 aa19.21■□□□□ 0.66
PTPRS-205ENST00000588012 NBPF1Q3BBV0 1214 aa19.2■□□□□ 0.66
PTPRS-205ENST00000588012 CCDC158Q5M9N0 1113 aa19.2■□□□□ 0.66
PTPRS-205ENST00000588012 ZNF530Q6P9A1 599 aaPredicted RBP19.2■□□□□ 0.66
PTPRS-205ENST00000588012 GNAI2P04899 355 aa19.19■□□□□ 0.66
PTPRS-205ENST00000588012 HDGFL1Q5TGJ6 251 aa19.19■□□□□ 0.66
PTPRS-205ENST00000588012 SLC12A5Q9H2X9 1139 aa19.19■□□□□ 0.66
PTPRS-205ENST00000588012 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.18■□□□□ 0.66
PTPRS-205ENST00000588012 POLA1P09884 1462 aaPredicted RBP19.18■□□□□ 0.66
PTPRS-205ENST00000588012 PPP1R1BQ9UD71 204 aaPredicted RBP19.18■□□□□ 0.66
PTPRS-205ENST00000588012 SLC26A8Q96RN1 970 aa19.17■□□□□ 0.66
PTPRS-205ENST00000588012 HMGXB3Q12766 1538 aa19.16■□□□□ 0.66
PTPRS-205ENST00000588012 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
PTPRS-205ENST00000588012 R3HCC1Q9Y3T6 440 aaKnown RBP19.16■□□□□ 0.66
PTPRS-205ENST00000588012 PIP4K2BP78356 416 aa19.16■□□□□ 0.66
PTPRS-205ENST00000588012 ZNF592Q92610 1267 aa19.16■□□□□ 0.66
PTPRS-205ENST00000588012 PRDM11Q9NQV5 511 aa19.16■□□□□ 0.66
PTPRS-205ENST00000588012 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■■■■□ 21
PTPRS-205ENST00000588012 CCT4P50991 539 aaKnown RBP19.15■□□□□ 0.66
PTPRS-205ENST00000588012 GSE1Q14687 1217 aa19.15■□□□□ 0.66
PTPRS-205ENST00000588012 TOP2BQ02880 1626 aa19.14■□□□□ 0.66
PTPRS-205ENST00000588012 NOB1Q9ULX3 412 aaKnown RBP19.14■□□□□ 0.66
PTPRS-205ENST00000588012 DAPK1P53355 1430 aa19.14■□□□□ 0.65
PTPRS-205ENST00000588012 ATAD2Q6PL18 1390 aa19.14■□□□□ 0.65
PTPRS-205ENST00000588012 KDM4AO75164 1064 aa19.14■□□□□ 0.65
PTPRS-205ENST00000588012 GPS2Q13227 327 aa19.14■□□□□ 0.65
PTPRS-205ENST00000588012 OLFM4Q6UX06 510 aa19.14■□□□□ 0.65
PTPRS-205ENST00000588012 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.65
PTPRS-205ENST00000588012 KRI1Q8N9T8 703 aaKnown RBP19.13■□□□□ 0.65
PTPRS-205ENST00000588012 SUPT6HQ7KZ85 1726 aaKnown RBP19.13■□□□□ 0.65
PTPRS-205ENST00000588012 GCC1Q96CN9 775 aa19.13■□□□□ 0.65
PTPRS-205ENST00000588012 ANKRD30BQ9BXX2 1392 aa19.13■□□□□ 0.65
PTPRS-205ENST00000588012 EPS15P42566 896 aa19.13■□□□□ 0.65
PTPRS-205ENST00000588012 CCAR1Q8IX12 1150 aaKnown RBP19.13■□□□□ 0.65
PTPRS-205ENST00000588012 RRP12Q5JTH9 1297 aaKnown RBP19.12■□□□□ 0.65
PTPRS-205ENST00000588012 HOMER1Q86YM7 354 aa19.12■□□□□ 0.65
PTPRS-205ENST00000588012 C1orf115Q9H7X2 142 aa19.12■□□□□ 0.65
PTPRS-205ENST00000588012 MYL6BP14649 208 aa19.12■□□□□ 0.65
PTPRS-205ENST00000588012 TNNT3P45378 269 aaPredicted RBP19.12■□□□□ 0.65
PTPRS-205ENST00000588012 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
PTPRS-205ENST00000588012 CT47A1Q5JQC4 288 aaPredicted RBP19.11■□□□□ 0.65
PTPRS-205ENST00000588012 SRCIN1Q9C0H9 1055 aa19.11■□□□□ 0.65
PTPRS-205ENST00000588012 NAT10Q9H0A0 1025 aaKnown RBP19.1■□□□□ 0.65
PTPRS-205ENST00000588012 NAP1L1P55209 391 aaKnown RBP19.1■□□□□ 0.65
PTPRS-205ENST00000588012 CDCA7LQ96GN5 454 aa19.1■□□□□ 0.65
PTPRS-205ENST00000588012 BTBD11A6QL63 1104 aa19.09■□□□□ 0.65
PTPRS-205ENST00000588012 MPHOSPH8Q99549 860 aa19.09■□□□□ 0.65
PTPRS-205ENST00000588012 CCDC57Q2TAC2 916 aa19.08■□□□□ 0.65
PTPRS-205ENST00000588012 CDK5RAP3Q96JB5 506 aa19.08■□□□□ 0.65
PTPRS-205ENST00000588012 NACAP1Q9BZK3 213 aa19.08■□□□□ 0.65
PTPRS-205ENST00000588012 ODF2Q5BJF6 829 aa19.08■□□□□ 0.64
PTPRS-205ENST00000588012 XPCQ01831 940 aaPredicted RBP19.08■□□□□ 0.64
PTPRS-205ENST00000588012 SIL1Q9H173 461 aa19.08■□□□□ 0.64
PTPRS-205ENST00000588012 RRS1Q15050 365 aaKnown RBP19.07■□□□□ 0.64
PTPRS-205ENST00000588012 TMEM132AQ24JP5 1023 aa19.07■□□□□ 0.64
PTPRS-205ENST00000588012 WDR63Q8IWG1 891 aa19.07■□□□□ 0.64
PTPRS-205ENST00000588012 CT47B1P0C2W7 299 aaPredicted RBP19.07■□□□□ 0.64
PTPRS-205ENST00000588012 LRRCC1Q9C099 1032 aa19.07■□□□□ 0.64
PTPRS-205ENST00000588012 TIAM1Q13009 1591 aa19.06■□□□□ 0.64
PTPRS-205ENST00000588012 ZSCAN25Q6NSZ9 544 aa19.06■□□□□ 0.64
PTPRS-205ENST00000588012 KIAA0586Q9BVV6 1533 aa19.06■□□□□ 0.64
PTPRS-205ENST00000588012 PDE3AQ14432 1141 aa19.06■□□□□ 0.64
PTPRS-205ENST00000588012 SDF4Q9BRK5 362 aa19.06■□□□□ 0.64
PTPRS-205ENST00000588012 PDZRN3Q9UPQ7 1066 aa19.06■□□□□ 0.64
PTPRS-205ENST00000588012 KCNH5Q8NCM2 988 aa19.06■□□□□ 0.64
PTPRS-205ENST00000588012 HMGB2P26583 209 aaKnown RBP19.06■□□□□ 0.64
PTPRS-205ENST00000588012 ATP2B2Q01814 1243 aa19.06■□□□□ 0.64
PTPRS-205ENST00000588012 EPRSP07814 1512 aaKnown RBP19.05■□□□□ 0.64
PTPRS-205ENST00000588012 PRXQ9BXM0 1461 aa19.05■□□□□ 0.64
PTPRS-205ENST00000588012 WWC2Q6AWC2 1192 aa19.05■□□□□ 0.64
PTPRS-205ENST00000588012 TXLNAP40222 546 aa19.05■□□□□ 0.64
PTPRS-205ENST00000588012 MCM2P49736 904 aa19.05■□□□□ 0.64
PTPRS-205ENST00000588012 NUDT16Q96DE0 195 aaKnown RBP19.05■□□□□ 0.64
PTPRS-205ENST00000588012 RBM5P52756 815 aaKnown RBP eCLIP19.04■□□□□ 0.648e-6■■□□□ 11.9
PTPRS-205ENST00000588012 OFD1O75665 1012 aa19.04■□□□□ 0.64
PTPRS-205ENST00000588012 ATP2B1P20020 1258 aa19.03■□□□□ 0.64
PTPRS-205ENST00000588012 NBPF8Q3BBV2 869 aa19.03■□□□□ 0.64
PTPRS-205ENST00000588012 PDCP20941 246 aa19.03■□□□□ 0.64
PTPRS-205ENST00000588012 NEK4P51957 841 aa19.03■□□□□ 0.64
PTPRS-205ENST00000588012 ZNF396Q96N95 335 aaPredicted RBP19.03■□□□□ 0.64
PTPRS-205ENST00000588012 CDK13Q14004 1512 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms