RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 ABCA3Q99758 1704 aa28.7■■■□□ 2.19
LDLRAD4-212ENST00000587905 POTEAQ6S8J7 498 aa28.7■■■□□ 2.18
LDLRAD4-212ENST00000587905 ZNF772Q68DY9 489 aaPredicted RBP28.68■■■□□ 2.18
LDLRAD4-212ENST00000587905 NUTM2GQ5VZR2 741 aa28.67■■■□□ 2.18
LDLRAD4-212ENST00000587905 TMC1Q8TDI8 760 aa28.67■■■□□ 2.18
LDLRAD4-212ENST00000587905 USP6P35125 1406 aa28.65■■■□□ 2.18
LDLRAD4-212ENST00000587905 AKAP12Q02952 1782 aa28.64■■■□□ 2.18
LDLRAD4-212ENST00000587905 SLC24A1O60721 1099 aa28.63■■■□□ 2.17
LDLRAD4-212ENST00000587905 ABTB2Q8N961 1025 aa28.63■■■□□ 2.17
LDLRAD4-212ENST00000587905 TMF1P82094 1093 aa28.62■■■□□ 2.17
LDLRAD4-212ENST00000587905 CRYBG1Q9Y4K1 1723 aa28.61■■■□□ 2.17
LDLRAD4-212ENST00000587905 USP21Q9UK80 565 aa28.6■■■□□ 2.17
LDLRAD4-212ENST00000587905 SLC12A5Q9H2X9 1139 aa28.59■■■□□ 2.17
LDLRAD4-212ENST00000587905 KTN1Q86UP2 1357 aaKnown RBP28.59■■■□□ 2.17
LDLRAD4-212ENST00000587905 SOCS7O14512 581 aa28.58■■■□□ 2.17
LDLRAD4-212ENST00000587905 ZNF692Q9BU19 519 aaPredicted RBP28.58■■■□□ 2.17
LDLRAD4-212ENST00000587905 PHRF1Q9P1Y6 1649 aaKnown RBP28.58■■■□□ 2.17
LDLRAD4-212ENST00000587905 PUS7Q96PZ0 661 aaKnown RBP28.57■■■□□ 2.16
LDLRAD4-212ENST00000587905 BRD4O60885 1362 aaPredicted RBP28.57■■■□□ 2.16
LDLRAD4-212ENST00000587905 CPSF1Q10570 1443 aaKnown RBP28.57■■■□□ 2.16
LDLRAD4-212ENST00000587905 MON2Q7Z3U7 1717 aa28.57■■■□□ 2.16
LDLRAD4-212ENST00000587905 EIF4G2P78344 907 aaKnown RBP eCLIP28.56■■■□□ 2.16
LDLRAD4-212ENST00000587905 FNBP4Q8N3X1 1017 aaPredicted RBP28.56■■■□□ 2.16
LDLRAD4-212ENST00000587905 HDGFL2Q7Z4V5 671 aaPredicted RBP28.55■■■□□ 2.16
LDLRAD4-212ENST00000587905 QTRT2Q9H974 415 aaKnown RBP28.55■■■□□ 2.16
LDLRAD4-212ENST00000587905 NRKQ7Z2Y5 1582 aa28.54■■■□□ 2.16
LDLRAD4-212ENST00000587905 CD163L1Q9NR16 1453 aa28.54■■■□□ 2.16
LDLRAD4-212ENST00000587905 HSPA5P11021 654 aaKnown RBP28.54■■■□□ 2.16
LDLRAD4-212ENST00000587905 PLCH1Q4KWH8 1693 aa28.54■■■□□ 2.16
LDLRAD4-212ENST00000587905 SSH2Q76I76 1423 aa28.53■■■□□ 2.16
LDLRAD4-212ENST00000587905 TTC21BQ7Z4L5 1316 aa28.53■■■□□ 2.16
LDLRAD4-212ENST00000587905 NLRP13Q86W25 1043 aa28.53■■■□□ 2.16
LDLRAD4-212ENST00000587905 PIK3C2AO00443 1686 aa28.53■■■□□ 2.16
LDLRAD4-212ENST00000587905 NLRP6P59044 892 aa28.52■■■□□ 2.16
LDLRAD4-212ENST00000587905 TERF2IPQ9NYB0 399 aa28.52■■■□□ 2.16
LDLRAD4-212ENST00000587905 CDCA8Q53HL2 280 aa28.51■■■□□ 2.15
LDLRAD4-212ENST00000587905 A0A1W2PP64 1363 aa28.5■■■□□ 2.15
LDLRAD4-212ENST00000587905 FAM83GA6ND36 823 aa28.5■■■□□ 2.15
LDLRAD4-212ENST00000587905 RXRBP28702 533 aa28.5■■■□□ 2.15
LDLRAD4-212ENST00000587905 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.5■■■□□ 2.151e-6■■■□□ 18.7
LDLRAD4-212ENST00000587905 BCL9LQ86UU0 1499 aa28.5■■■□□ 2.15
LDLRAD4-212ENST00000587905 NINLQ9Y2I6 1382 aa28.5■■■□□ 2.15
LDLRAD4-212ENST00000587905 SLIT2O94813 1529 aa28.49■■■□□ 2.15
LDLRAD4-212ENST00000587905 ZC3H6P61129 1189 aaKnown RBP28.49■■■□□ 2.15
LDLRAD4-212ENST00000587905 PRDM11Q9NQV5 511 aa28.49■■■□□ 2.15
LDLRAD4-212ENST00000587905 TRPC5Q9UL62 973 aaPredicted RBP28.49■■■□□ 2.15
LDLRAD4-212ENST00000587905 POLR3GLQ9BT43 218 aa28.48■■■□□ 2.15
LDLRAD4-212ENST00000587905 COL14A1Q05707 1796 aaKnown RBP28.47■■■□□ 2.15
LDLRAD4-212ENST00000587905 USP19O94966 1318 aa28.47■■■□□ 2.15
LDLRAD4-212ENST00000587905 TTC21AQ8NDW8 1320 aa28.47■■■□□ 2.15
LDLRAD4-212ENST00000587905 KIAA0232Q92628 1395 aa28.47■■■□□ 2.15
LDLRAD4-212ENST00000587905 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.46■■■□□ 2.15
LDLRAD4-212ENST00000587905 NWD2Q9ULI1 1742 aa28.46■■■□□ 2.15
LDLRAD4-212ENST00000587905 UNC5CLQ8IV45 518 aa28.45■■■□□ 2.14
LDLRAD4-212ENST00000587905 ATRNO75882 1429 aa28.44■■■□□ 2.14
LDLRAD4-212ENST00000587905 RBM6P78332 1123 aaKnown RBP28.44■■■□□ 2.14
LDLRAD4-212ENST00000587905 CHRNA2Q15822 529 aa28.44■■■□□ 2.14
LDLRAD4-212ENST00000587905 BTG4Q9NY30 223 aa28.44■■■□□ 2.14
LDLRAD4-212ENST00000587905 EDC4Q6P2E9 1401 aaKnown RBP28.43■■■□□ 2.14
LDLRAD4-212ENST00000587905 ZBTB7CA1YPR0 619 aa28.43■■■□□ 2.14
LDLRAD4-212ENST00000587905 GCP02774 474 aa28.43■■■□□ 2.14
LDLRAD4-212ENST00000587905 SOX12O15370 315 aa28.42■■■□□ 2.14
LDLRAD4-212ENST00000587905 NME9Q86XW9 330 aa28.42■■■□□ 2.14
LDLRAD4-212ENST00000587905 ZRANB1Q9UGI0 708 aa28.41■■■□□ 2.14
LDLRAD4-212ENST00000587905 CCDC9Q9Y3X0 531 aaKnown RBP28.41■■■□□ 2.14
LDLRAD4-212ENST00000587905 SLIT3O75094 1523 aa28.41■■■□□ 2.14
LDLRAD4-212ENST00000587905 MYOM1P52179 1685 aa28.41■■■□□ 2.14
LDLRAD4-212ENST00000587905 ANKRD36BQ8N2N9 1353 aa28.4■■■□□ 2.14
LDLRAD4-212ENST00000587905 NRAPQ86VF7 1730 aa28.4■■■□□ 2.14
LDLRAD4-212ENST00000587905 GJD4Q96KN9 370 aaPredicted RBP28.37■■■□□ 2.13
LDLRAD4-212ENST00000587905 CPDO75976 1380 aa28.36■■■□□ 2.13
LDLRAD4-212ENST00000587905 RGS12O14924 1447 aa28.35■■■□□ 2.13
LDLRAD4-212ENST00000587905 CDK12Q9NYV4 1490 aaPredicted RBP28.34■■■□□ 2.13
LDLRAD4-212ENST00000587905 VPS72Q15906 364 aa28.34■■■□□ 2.13
LDLRAD4-212ENST00000587905 STRN4Q9NRL3 753 aa28.34■■■□□ 2.13
LDLRAD4-212ENST00000587905 GLI3P10071 1580 aa28.33■■■□□ 2.13
LDLRAD4-212ENST00000587905 KCNH5Q8NCM2 988 aa28.33■■■□□ 2.13
LDLRAD4-212ENST00000587905 USP31Q70CQ4 1352 aa28.33■■■□□ 2.13
LDLRAD4-212ENST00000587905 USP54Q70EL1 1684 aa28.32■■■□□ 2.12
LDLRAD4-212ENST00000587905 LMO7Q8WWI1 1683 aa28.3■■■□□ 2.12
LDLRAD4-212ENST00000587905 CAMTA1Q9Y6Y1 1673 aa28.29■■■□□ 2.12
LDLRAD4-212ENST00000587905 EVA1CP58658 441 aa28.29■■■□□ 2.12
LDLRAD4-212ENST00000587905 NFAT5O94916 1531 aa28.28■■■□□ 2.12
LDLRAD4-212ENST00000587905 C11orf95C9JLR9 678 aaPredicted RBP28.28■■■□□ 2.12
LDLRAD4-212ENST00000587905 OVOS2A0A0J9YW53 1432 aa28.27■■■□□ 2.12
LDLRAD4-212ENST00000587905 OVOS2Q6IE36 1432 aa28.27■■■□□ 2.12
LDLRAD4-212ENST00000587905 COG3Q96JB2 828 aa28.26■■■□□ 2.11
LDLRAD4-212ENST00000587905 KIF20BQ96Q89 1820 aa28.26■■■□□ 2.11
LDLRAD4-212ENST00000587905 NSD3Q9BZ95 1437 aa28.26■■■□□ 2.11
LDLRAD4-212ENST00000587905 AATKQ6ZMQ8 1374 aa28.24■■■□□ 2.11
LDLRAD4-212ENST00000587905 A0A0G2JS52 829 aa28.24■■■□□ 2.11
LDLRAD4-212ENST00000587905 MYT1Q01538 1121 aa28.24■■■□□ 2.11
LDLRAD4-212ENST00000587905 ARHGEF25Q86VW2 580 aa28.24■■■□□ 2.11
LDLRAD4-212ENST00000587905 CARD14Q9BXL6 1004 aa28.24■■■□□ 2.11
LDLRAD4-212ENST00000587905 GGNBP2Q9H3C7 697 aa28.24■■■□□ 2.11
LDLRAD4-212ENST00000587905 LTN1O94822 1766 aa28.23■■■□□ 2.11
LDLRAD4-212ENST00000587905 COL18A1P39060 1754 aa28.23■■■□□ 2.11
LDLRAD4-212ENST00000587905 SPATA31A5Q5VU36 1347 aa28.22■■■□□ 2.11
LDLRAD4-212ENST00000587905 SPATA31A7Q8IWB4 1347 aa28.22■■■□□ 2.11
LDLRAD4-212ENST00000587905 RGPD5Q99666 1765 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms