RNA–Protein interactions for RNA: ENST00000587881.1

NEDD4L-220, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-220ENST00000587881 TNNQ9UQP3 1299 aa18.35■□□□□ 0.53
NEDD4L-220ENST00000587881 DZIP1LQ8IYY4 767 aaKnown RBP18.34■□□□□ 0.53
NEDD4L-220ENST00000587881 MINK1Q8N4C8 1332 aaPredicted RBP18.34■□□□□ 0.53
NEDD4L-220ENST00000587881 HDGFL2Q7Z4V5 671 aaPredicted RBP18.33■□□□□ 0.53
NEDD4L-220ENST00000587881 FTSJ3Q8IY81 847 aaKnown RBP18.33■□□□□ 0.52
NEDD4L-220ENST00000587881 TRIM35Q9UPQ4 493 aa18.33■□□□□ 0.52
NEDD4L-220ENST00000587881 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
NEDD4L-220ENST00000587881 CD163L1Q9NR16 1453 aa18.33■□□□□ 0.52
NEDD4L-220ENST00000587881 SEC24BO95487 1268 aa18.31■□□□□ 0.52
NEDD4L-220ENST00000587881 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
NEDD4L-220ENST00000587881 BECN1Q14457 450 aa18.31■□□□□ 0.52
NEDD4L-220ENST00000587881 GSE1Q14687 1217 aa18.31■□□□□ 0.52
NEDD4L-220ENST00000587881 TSR2Q969E8 191 aaKnown RBP18.31■□□□□ 0.52
NEDD4L-220ENST00000587881 DIAPH1O60610 1272 aaKnown RBP18.3■□□□□ 0.52
NEDD4L-220ENST00000587881 CDK19Q9BWU1 502 aa18.3■□□□□ 0.52
NEDD4L-220ENST00000587881 ALKQ9UM73 1620 aa18.3■□□□□ 0.52
NEDD4L-220ENST00000587881 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
NEDD4L-220ENST00000587881 NLRP1Q9C000 1473 aa18.3■□□□□ 0.52
NEDD4L-220ENST00000587881 UPF2Q9HAU5 1272 aaKnown RBP18.3■□□□□ 0.52
NEDD4L-220ENST00000587881 SMC4Q9NTJ3 1288 aa18.3■□□□□ 0.52
NEDD4L-220ENST00000587881 RIPK4P57078 832 aa18.28■□□□□ 0.52
NEDD4L-220ENST00000587881 KIF20BQ96Q89 1820 aa18.28■□□□□ 0.52
NEDD4L-220ENST00000587881 DDX19BQ9UMR2 479 aa18.28■□□□□ 0.52
NEDD4L-220ENST00000587881 ARHGEF40Q8TER5 1519 aa18.28■□□□□ 0.52
NEDD4L-220ENST00000587881 FBXO31Q5XUX0 539 aaPredicted RBP18.27■□□□□ 0.52
NEDD4L-220ENST00000587881 SSH1Q8WYL5 1049 aa18.27■□□□□ 0.52
NEDD4L-220ENST00000587881 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
NEDD4L-220ENST00000587881 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.52
NEDD4L-220ENST00000587881 PPP6R1Q9UPN7 881 aa18.27■□□□□ 0.52
NEDD4L-220ENST00000587881 FCHSD2O94868 740 aa18.26■□□□□ 0.51
NEDD4L-220ENST00000587881 HDAC1Q13547 482 aaPredicted RBP18.26■□□□□ 0.51
NEDD4L-220ENST00000587881 CABP1Q9NZU7 370 aa18.26■□□□□ 0.51
NEDD4L-220ENST00000587881 TRIM27P14373 513 aa18.26■□□□□ 0.51
NEDD4L-220ENST00000587881 ATF7IPQ6VMQ6 1270 aa18.26■□□□□ 0.51
NEDD4L-220ENST00000587881 IPO8O15397 1037 aaKnown RBP18.25■□□□□ 0.51
NEDD4L-220ENST00000587881 DLC1Q96QB1 1528 aa18.24■□□□□ 0.51
NEDD4L-220ENST00000587881 TBC1D32Q96NH3 1257 aa18.24■□□□□ 0.51
NEDD4L-220ENST00000587881 NOB1Q9ULX3 412 aaKnown RBP18.24■□□□□ 0.51
NEDD4L-220ENST00000587881 CDC42BPGQ6DT37 1551 aa18.23■□□□□ 0.51
NEDD4L-220ENST00000587881 FRAT2O75474 233 aaPredicted RBP18.22■□□□□ 0.51
NEDD4L-220ENST00000587881 ALDH1L2Q3SY69 923 aa18.22■□□□□ 0.51
NEDD4L-220ENST00000587881 KIF16BQ96L93 1317 aa18.22■□□□□ 0.51
NEDD4L-220ENST00000587881 ITPRIPQ8IWB1 547 aa18.22■□□□□ 0.51
NEDD4L-220ENST00000587881 ZNF428Q96B54 188 aa18.21■□□□□ 0.51
NEDD4L-220ENST00000587881 ATP7BP35670 1465 aa18.21■□□□□ 0.51
NEDD4L-220ENST00000587881 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
NEDD4L-220ENST00000587881 REREQ9P2R6 1566 aa18.19■□□□□ 0.5
NEDD4L-220ENST00000587881 SMC5Q8IY18 1101 aa18.19■□□□□ 0.5
NEDD4L-220ENST00000587881 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
NEDD4L-220ENST00000587881 POLKQ9UBT6 870 aa18.19■□□□□ 0.5
NEDD4L-220ENST00000587881 AGLP35573 1532 aa18.18■□□□□ 0.5
NEDD4L-220ENST00000587881 BRPF1P55201 1214 aaPredicted RBP18.18■□□□□ 0.5
NEDD4L-220ENST00000587881 TMEM57Q8N5G2 664 aa18.18■□□□□ 0.5
NEDD4L-220ENST00000587881 ZBTB40Q9NUA8 1239 aa18.18■□□□□ 0.5
NEDD4L-220ENST00000587881 CALD1Q05682 793 aaKnown RBP18.17■□□□□ 0.5
NEDD4L-220ENST00000587881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■□□□□ 8.7
NEDD4L-220ENST00000587881 FAM135BQ49AJ0 1406 aa18.17■□□□□ 0.5
NEDD4L-220ENST00000587881 A2ML1A8K2U0 1454 aa18.17■□□□□ 0.5
NEDD4L-220ENST00000587881 PRKAR2BP31323 418 aa18.17■□□□□ 0.5
NEDD4L-220ENST00000587881 WAPLQ7Z5K2 1190 aa18.17■□□□□ 0.5
NEDD4L-220ENST00000587881 LRRC7Q96NW7 1537 aa18.16■□□□□ 0.5
NEDD4L-220ENST00000587881 RIMS2Q9UQ26 1411 aa18.16■□□□□ 0.5
NEDD4L-220ENST00000587881 PPIP5K1Q6PFW1 1433 aa18.15■□□□□ 0.5
NEDD4L-220ENST00000587881 FAM69CQ0P6D2 419 aa18.15■□□□□ 0.5
NEDD4L-220ENST00000587881 NFE2L2Q16236 605 aa18.15■□□□□ 0.5
NEDD4L-220ENST00000587881 CHMP4BQ9H444 224 aaKnown RBP18.15■□□□□ 0.5
NEDD4L-220ENST00000587881 SETD1AO15047 1707 aaKnown RBP18.15■□□□□ 0.5
NEDD4L-220ENST00000587881 SPATA31D1Q6ZQQ2 1576 aa18.14■□□□□ 0.5
NEDD4L-220ENST00000587881 TBC1D2Q9BYX2 928 aa18.13■□□□□ 0.49
NEDD4L-220ENST00000587881 ANTXR1Q9H6X2 564 aa18.13■□□□□ 0.49
NEDD4L-220ENST00000587881 CYB5RLQ6IPT4 315 aa18.13■□□□□ 0.49
NEDD4L-220ENST00000587881 EDC4Q6P2E9 1401 aaKnown RBP18.13■□□□□ 0.49
NEDD4L-220ENST00000587881 WASLO00401 505 aaPredicted RBP18.12■□□□□ 0.49
NEDD4L-220ENST00000587881 ARHGAP45Q92619 1136 aa18.12■□□□□ 0.49
NEDD4L-220ENST00000587881 C22orf23Q9BZE7 217 aa18.12■□□□□ 0.49
NEDD4L-220ENST00000587881 CPSF1Q10570 1443 aaKnown RBP18.12■□□□□ 0.49
NEDD4L-220ENST00000587881 RIMBP3CA6NJZ7 1639 aa18.12■□□□□ 0.49
NEDD4L-220ENST00000587881 RIMBP3BA6NNM3 1639 aa18.12■□□□□ 0.49
NEDD4L-220ENST00000587881 RIMBP3Q9UFD9 1639 aa18.12■□□□□ 0.49
NEDD4L-220ENST00000587881 GNAI1P63096 354 aa18.11■□□□□ 0.49
NEDD4L-220ENST00000587881 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.11■□□□□ 0.49
NEDD4L-220ENST00000587881 IL27Q8NEV9 243 aa18.11■□□□□ 0.49
NEDD4L-220ENST00000587881 SLKQ9H2G2 1235 aaPredicted RBP18.11■□□□□ 0.49
NEDD4L-220ENST00000587881 NUCB1Q02818 461 aa18.11■□□□□ 0.49
NEDD4L-220ENST00000587881 PHACTR3Q96KR7 559 aa18.11■□□□□ 0.49
NEDD4L-220ENST00000587881 AATKQ6ZMQ8 1374 aa18.1■□□□□ 0.49
NEDD4L-220ENST00000587881 VAMP4O75379 141 aa18.1■□□□□ 0.49
NEDD4L-220ENST00000587881 FBLN1P23142 703 aa18.1■□□□□ 0.49
NEDD4L-220ENST00000587881 IL13P35225 146 aa18.1■□□□□ 0.49
NEDD4L-220ENST00000587881 IFT57Q9NWB7 429 aa18.1■□□□□ 0.49
NEDD4L-220ENST00000587881 HMOX1P09601 288 aa18.09■□□□□ 0.49
NEDD4L-220ENST00000587881 SIRT1Q96EB6 747 aa18.09■□□□□ 0.49
NEDD4L-220ENST00000587881 DIP2BQ9P265 1576 aa18.09■□□□□ 0.49
NEDD4L-220ENST00000587881 CDK12Q9NYV4 1490 aaPredicted RBP18.09■□□□□ 0.49
NEDD4L-220ENST00000587881 LMOD3Q0VAK6 560 aa18.08■□□□□ 0.49
NEDD4L-220ENST00000587881 MRPL50Q8N5N7 158 aaKnown RBP18.08■□□□□ 0.49
NEDD4L-220ENST00000587881 TSPOAP1O95153 1857 aa18.08■□□□□ 0.49
NEDD4L-220ENST00000587881 ZNF853P0CG23 659 aa18.08■□□□□ 0.48
NEDD4L-220ENST00000587881 MFAP1P55081 439 aaKnown RBP18.08■□□□□ 0.48
NEDD4L-220ENST00000587881 EMILIN1Q9Y6C2 1016 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms