RNA–Protein interactions for RNA: ENST00000587652.5

GCOM1-214, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GCOM1, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-214ENST00000587652 TERF2IPQ9NYB0 399 aa18.06■□□□□ 0.48
GCOM1-214ENST00000587652 MINK1Q8N4C8 1332 aaPredicted RBP18.06■□□□□ 0.48
GCOM1-214ENST00000587652 ZNF335Q9H4Z2 1342 aaPredicted RBP18.06■□□□□ 0.48
GCOM1-214ENST00000587652 ROBO2Q9HCK4 1378 aa18.06■□□□□ 0.48
GCOM1-214ENST00000587652 MS4A1P11836 297 aa18.05■□□□□ 0.48
GCOM1-214ENST00000587652 CCDC27Q2M243 656 aa18.04■□□□□ 0.48
GCOM1-214ENST00000587652 DMRT2Q9Y5R5 561 aa18.04■□□□□ 0.48
GCOM1-214ENST00000587652 XRN1Q8IZH2 1706 aaKnown RBP18.03■□□□□ 0.48
GCOM1-214ENST00000587652 WDR63Q8IWG1 891 aa18.03■□□□□ 0.48
GCOM1-214ENST00000587652 TCP11L2Q8N4U5 519 aa18.03■□□□□ 0.48
GCOM1-214ENST00000587652 CDK19Q9BWU1 502 aa18.03■□□□□ 0.48
GCOM1-214ENST00000587652 ADGRB2O60241 1585 aa18.01■□□□□ 0.47
GCOM1-214ENST00000587652 KDM2BQ8NHM5 1336 aa18■□□□□ 0.47
GCOM1-214ENST00000587652 COL3A1P02461 1466 aaPredicted RBP18■□□□□ 0.47
GCOM1-214ENST00000587652 FYB1O15117 783 aa18■□□□□ 0.47
GCOM1-214ENST00000587652 HDGFL2Q7Z4V5 671 aaPredicted RBP18■□□□□ 0.47
GCOM1-214ENST00000587652 PIK3R4Q99570 1358 aa18■□□□□ 0.47
GCOM1-214ENST00000587652 TECPR2O15040 1411 aa17.99■□□□□ 0.47
GCOM1-214ENST00000587652 KNDC1Q76NI1 1749 aa17.99■□□□□ 0.47
GCOM1-214ENST00000587652 CPS1P31327 1500 aa17.98■□□□□ 0.47
GCOM1-214ENST00000587652 KIF20BQ96Q89 1820 aa17.98■□□□□ 0.47
GCOM1-214ENST00000587652 CENPQQ7L2Z9 268 aaPredicted RBP17.98■□□□□ 0.47
GCOM1-214ENST00000587652 GGNBP2Q9H3C7 697 aa17.98■□□□□ 0.47
GCOM1-214ENST00000587652 ATP7BP35670 1465 aa17.98■□□□□ 0.47
GCOM1-214ENST00000587652 NWD1Q149M9 1564 aa17.97■□□□□ 0.47
GCOM1-214ENST00000587652 BCAR3O75815 825 aa17.97■□□□□ 0.47
GCOM1-214ENST00000587652 PDE3AQ14432 1141 aa17.97■□□□□ 0.47
GCOM1-214ENST00000587652 SIRT1Q96EB6 747 aa17.97■□□□□ 0.47
GCOM1-214ENST00000587652 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.96■□□□□ 0.47
GCOM1-214ENST00000587652 U2AF1L5P0DN76 240 aaPredicted RBP17.95■□□□□ 0.46
GCOM1-214ENST00000587652 U2AF1Q01081 240 aaKnown RBP eCLIP17.95■□□□□ 0.46
GCOM1-214ENST00000587652 CABP1Q9NZU7 370 aa17.95■□□□□ 0.46
GCOM1-214ENST00000587652 RRP7AQ9Y3A4 280 aaKnown RBP17.95■□□□□ 0.46
GCOM1-214ENST00000587652 PTCH1Q13635 1447 aa17.95■□□□□ 0.46
GCOM1-214ENST00000587652 PNPLA6Q8IY17 1366 aa17.95■□□□□ 0.46
GCOM1-214ENST00000587652 PDE4AP27815 886 aa17.94■□□□□ 0.46
GCOM1-214ENST00000587652 NEUROD2Q15784 382 aa17.94■□□□□ 0.46
GCOM1-214ENST00000587652 PROSER2Q86WR7 435 aaPredicted RBP17.94■□□□□ 0.46
GCOM1-214ENST00000587652 BACH2Q9BYV9 841 aa17.94■□□□□ 0.46
GCOM1-214ENST00000587652 FAM135BQ49AJ0 1406 aa17.93■□□□□ 0.46
GCOM1-214ENST00000587652 ANP32AP39687 249 aaKnown RBP17.93■□□□□ 0.46
GCOM1-214ENST00000587652 ERICH6Q7L0X2 663 aa17.93■□□□□ 0.46
GCOM1-214ENST00000587652 PLEKHF1Q96S99 279 aa17.93■□□□□ 0.46
GCOM1-214ENST00000587652 XIRP1Q702N8 1843 aaKnown RBP17.91■□□□□ 0.46
GCOM1-214ENST00000587652 TMEM94Q12767 1356 aa17.91■□□□□ 0.46
GCOM1-214ENST00000587652 RARSP54136 660 aaKnown RBP17.9■□□□□ 0.46
GCOM1-214ENST00000587652 MYH16Q9H6N6 1097 aa17.9■□□□□ 0.46
GCOM1-214ENST00000587652 CDC42BPGQ6DT37 1551 aa17.9■□□□□ 0.46
GCOM1-214ENST00000587652 NALCNQ8IZF0 1738 aa17.9■□□□□ 0.46
GCOM1-214ENST00000587652 NUTM2FA1L443 756 aa17.9■□□□□ 0.46
GCOM1-214ENST00000587652 WASLO00401 505 aaPredicted RBP17.9■□□□□ 0.46
GCOM1-214ENST00000587652 CPSF1Q10570 1443 aaKnown RBP17.9■□□□□ 0.46
GCOM1-214ENST00000587652 LRRC7Q96NW7 1537 aa17.89■□□□□ 0.46
GCOM1-214ENST00000587652 IPO9Q96P70 1041 aaKnown RBP17.89■□□□□ 0.46
GCOM1-214ENST00000587652 LTBP4Q8N2S1 1624 aa17.89■□□□□ 0.45
GCOM1-214ENST00000587652 DIAPH1O60610 1272 aaKnown RBP17.88■□□□□ 0.45
GCOM1-214ENST00000587652 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
GCOM1-214ENST00000587652 C14orf37Q86TY3 774 aa17.88■□□□□ 0.45
GCOM1-214ENST00000587652 NOP58Q9Y2X3 529 aaKnown RBP17.88■□□□□ 0.45
GCOM1-214ENST00000587652 EDC4Q6P2E9 1401 aaKnown RBP17.87■□□□□ 0.45
GCOM1-214ENST00000587652 CT47B1P0C2W7 299 aaPredicted RBP17.87■□□□□ 0.45
GCOM1-214ENST00000587652 TMPOP42166 694 aaKnown RBP17.87■□□□□ 0.45
GCOM1-214ENST00000587652 AAMPQ13685 434 aa17.87■□□□□ 0.45
GCOM1-214ENST00000587652 U2SURPO15042 1029 aaKnown RBP17.87■□□□□ 0.45
GCOM1-214ENST00000587652 IL16Q14005 1332 aa17.86■□□□□ 0.45
GCOM1-214ENST00000587652 PPIP5K1Q6PFW1 1433 aa17.86■□□□□ 0.45
GCOM1-214ENST00000587652 TRIM35Q9UPQ4 493 aa17.85■□□□□ 0.45
GCOM1-214ENST00000587652 MAPK8IP3Q9UPT6 1336 aa17.85■□□□□ 0.45
GCOM1-214ENST00000587652 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
GCOM1-214ENST00000587652 ADGRL3Q9HAR2 1447 aa17.84■□□□□ 0.45
GCOM1-214ENST00000587652 MON2Q7Z3U7 1717 aa17.83■□□□□ 0.45
GCOM1-214ENST00000587652 POLKQ9UBT6 870 aa17.83■□□□□ 0.45
GCOM1-214ENST00000587652 FCHSD2O94868 740 aa17.83■□□□□ 0.44
GCOM1-214ENST00000587652 NUDT16Q96DE0 195 aaKnown RBP17.83■□□□□ 0.44
GCOM1-214ENST00000587652 AKAP12Q02952 1782 aa17.82■□□□□ 0.44
GCOM1-214ENST00000587652 SKAP1Q86WV1 359 aa17.82■□□□□ 0.44
GCOM1-214ENST00000587652 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.82■□□□□ 0.44
GCOM1-214ENST00000587652 PANK1Q8TE04 598 aa17.82■□□□□ 0.44
GCOM1-214ENST00000587652 CLUAP1Q96AJ1 413 aa17.82■□□□□ 0.44
GCOM1-214ENST00000587652 RGPD8O14715 1765 aaPredicted RBP17.82■□□□□ 0.44
GCOM1-214ENST00000587652 PRR36Q9H6K5 1346 aa17.82■□□□□ 0.44
GCOM1-214ENST00000587652 AATKQ6ZMQ8 1374 aa17.81■□□□□ 0.44
GCOM1-214ENST00000587652 CCDC61Q9Y6R9 512 aa17.81■□□□□ 0.44
GCOM1-214ENST00000587652 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
GCOM1-214ENST00000587652 COG6Q9Y2V7 657 aa17.81■□□□□ 0.44
GCOM1-214ENST00000587652 FRAT1Q92837 279 aaPredicted RBP17.8■□□□□ 0.44
GCOM1-214ENST00000587652 C19orf44Q9H6X5 657 aa17.8■□□□□ 0.44
GCOM1-214ENST00000587652 ZBTB47Q9UFB7 747 aaPredicted RBP17.8■□□□□ 0.44
GCOM1-214ENST00000587652 PAK3O75914 559 aaPredicted RBP17.79■□□□□ 0.44
GCOM1-214ENST00000587652 ITSN1Q15811 1721 aa17.79■□□□□ 0.44
GCOM1-214ENST00000587652 IGHDP01880 384 aa17.78■□□□□ 0.44
GCOM1-214ENST00000587652 RIPK4P57078 832 aa17.78■□□□□ 0.44
GCOM1-214ENST00000587652 ZNF692Q9BU19 519 aaPredicted RBP17.78■□□□□ 0.44
GCOM1-214ENST00000587652 RSPH6AQ9H0K4 717 aa17.78■□□□□ 0.44
GCOM1-214ENST00000587652 CDK12Q9NYV4 1490 aaPredicted RBP17.78■□□□□ 0.44
GCOM1-214ENST00000587652 FMN2Q9NZ56 1722 aa17.77■□□□□ 0.44
GCOM1-214ENST00000587652 FAM161AQ3B820 660 aa17.77■□□□□ 0.43
GCOM1-214ENST00000587652 EXOSC9Q06265 439 aaKnown RBP17.76■□□□□ 0.43
GCOM1-214ENST00000587652 NME9Q86XW9 330 aa17.76■□□□□ 0.43
GCOM1-214ENST00000587652 MSH6P52701 1360 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms