RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 GLI3P10071 1580 aa9.4□□□□□ -0.9
SDF2-205ENST00000587629 ARHGEF10O15013 1369 aa9.39□□□□□ -0.91
SDF2-205ENST00000587629 PRR36Q9H6K5 1346 aa9.39□□□□□ -0.91
SDF2-205ENST00000587629 WASLO00401 505 aaPredicted RBP9.39□□□□□ -0.91
SDF2-205ENST00000587629 DEFB132Q7Z7B7 95 aa9.39□□□□□ -0.91
SDF2-205ENST00000587629 NGDNQ8NEJ9 315 aaKnown RBP9.39□□□□□ -0.91
SDF2-205ENST00000587629 GPRASP1Q5JY77 1395 aa9.38□□□□□ -0.91
SDF2-205ENST00000587629 ADGRB1O14514 1584 aa9.38□□□□□ -0.91
SDF2-205ENST00000587629 DLC1Q96QB1 1528 aa9.38□□□□□ -0.91
SDF2-205ENST00000587629 FAM98CQ17RN3 349 aaKnown RBP9.38□□□□□ -0.91
SDF2-205ENST00000587629 BTG4Q9NY30 223 aa9.38□□□□□ -0.91
SDF2-205ENST00000587629 ANKARQ7Z5J8 1434 aa9.38□□□□□ -0.91
SDF2-205ENST00000587629 SF3B2Q13435 895 aaKnown RBP9.37□□□□□ -0.91
SDF2-205ENST00000587629 KRT27Q7Z3Y8 459 aa9.37□□□□□ -0.91
SDF2-205ENST00000587629 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.36□□□□□ -0.91
SDF2-205ENST00000587629 FAM182BQ5T319 152 aa9.36□□□□□ -0.91
SDF2-205ENST00000587629 NUTM2GQ5VZR2 741 aa9.36□□□□□ -0.91
SDF2-205ENST00000587629 NUDT16Q96DE0 195 aaKnown RBP9.36□□□□□ -0.91
SDF2-205ENST00000587629 RBM42Q9BTD8 480 aaKnown RBP9.36□□□□□ -0.91
SDF2-205ENST00000587629 BLMP54132 1417 aaPredicted RBP9.36□□□□□ -0.91
SDF2-205ENST00000587629 PLCH1Q4KWH8 1693 aa9.36□□□□□ -0.91
SDF2-205ENST00000587629 BRWD3Q6RI45 1802 aa9.35□□□□□ -0.91
SDF2-205ENST00000587629 ONECUT3O60422 494 aaPredicted RBP9.35□□□□□ -0.91
SDF2-205ENST00000587629 CDK19Q9BWU1 502 aa9.35□□□□□ -0.91
SDF2-205ENST00000587629 PRDM11Q9NQV5 511 aa9.35□□□□□ -0.91
SDF2-205ENST00000587629 EIF3AQ14152 1382 aaKnown RBP9.35□□□□□ -0.91
SDF2-205ENST00000587629 ABCA3Q99758 1704 aa9.34□□□□□ -0.91
SDF2-205ENST00000587629 ADGRB2O60241 1585 aa9.34□□□□□ -0.91
SDF2-205ENST00000587629 CHRNA2Q15822 529 aa9.34□□□□□ -0.91
SDF2-205ENST00000587629 TULP4Q9NRJ4 1543 aa9.34□□□□□ -0.91
SDF2-205ENST00000587629 TRPM3Q9HCF6 1732 aaPredicted RBP9.34□□□□□ -0.92
SDF2-205ENST00000587629 ZC3H6P61129 1189 aaKnown RBP9.33□□□□□ -0.92
SDF2-205ENST00000587629 SP7Q8TDD2 431 aaPredicted RBP9.33□□□□□ -0.92
SDF2-205ENST00000587629 STRN4Q9NRL3 753 aa9.33□□□□□ -0.92
SDF2-205ENST00000587629 NWD2Q9ULI1 1742 aa9.33□□□□□ -0.92
SDF2-205ENST00000587629 SPATA31A5Q5VU36 1347 aa9.32□□□□□ -0.92
SDF2-205ENST00000587629 SPATA31A7Q8IWB4 1347 aa9.32□□□□□ -0.92
SDF2-205ENST00000587629 PSDA5PKW4 1024 aaPredicted RBP9.32□□□□□ -0.92
SDF2-205ENST00000587629 HRCP23327 699 aa9.32□□□□□ -0.92
SDF2-205ENST00000587629 NBPF1Q3BBV0 1214 aa9.32□□□□□ -0.92
SDF2-205ENST00000587629 STAC3Q96MF2 364 aa9.32□□□□□ -0.92
SDF2-205ENST00000587629 ALS2Q96Q42 1657 aa9.32□□□□□ -0.92
SDF2-205ENST00000587629 ACEP12821 1306 aa9.31□□□□□ -0.92
SDF2-205ENST00000587629 SLC4A2P04920 1241 aa9.31□□□□□ -0.92
SDF2-205ENST00000587629 BAG6P46379 1132 aa9.31□□□□□ -0.92
SDF2-205ENST00000587629 EN1Q05925 392 aaPredicted RBP9.31□□□□□ -0.92
SDF2-205ENST00000587629 NBPF8Q3BBV2 869 aa9.31□□□□□ -0.92
SDF2-205ENST00000587629 USP35Q9P2H5 1018 aa9.31□□□□□ -0.92
SDF2-205ENST00000587629 KIAA0232Q92628 1395 aa9.31□□□□□ -0.92
SDF2-205ENST00000587629 COL14A1Q05707 1796 aaKnown RBP9.3□□□□□ -0.92
SDF2-205ENST00000587629 ATP7BP35670 1465 aa9.3□□□□□ -0.92
SDF2-205ENST00000587629 EVA1CP58658 441 aa9.3□□□□□ -0.92
SDF2-205ENST00000587629 SRPK2P78362 688 aaKnown RBP9.3□□□□□ -0.92
SDF2-205ENST00000587629 ABTB2Q8N961 1025 aa9.3□□□□□ -0.92
SDF2-205ENST00000587629 CCDC61Q9Y6R9 512 aa9.3□□□□□ -0.92
SDF2-205ENST00000587629 NRAPQ86VF7 1730 aa9.3□□□□□ -0.92
SDF2-205ENST00000587629 ARHGEF28Q8N1W1 1705 aaKnown RBP9.3□□□□□ -0.92
SDF2-205ENST00000587629 ZBTB7CA1YPR0 619 aa9.29□□□□□ -0.92
SDF2-205ENST00000587629 CABP2Q9NPB3 220 aa9.29□□□□□ -0.92
SDF2-205ENST00000587629 SPATA31A1Q5TZJ5 1347 aa9.29□□□□□ -0.92
SDF2-205ENST00000587629 POLR3AO14802 1390 aaPredicted RBP9.27□□□□□ -0.93
SDF2-205ENST00000587629 PLEKHG3A1L390 1219 aa9.27□□□□□ -0.93
SDF2-205ENST00000587629 TRIM37O94972 964 aa9.27□□□□□ -0.93
SDF2-205ENST00000587629 R3HDM1Q15032 1099 aaKnown RBP9.27□□□□□ -0.93
SDF2-205ENST00000587629 LARP1Q6PKG0 1096 aaKnown RBP9.27□□□□□ -0.93
SDF2-205ENST00000587629 CRYBG1Q9Y4K1 1723 aa9.27□□□□□ -0.93
SDF2-205ENST00000587629 CENPJQ9HC77 1338 aaPredicted RBP9.27□□□□□ -0.93
SDF2-205ENST00000587629 ITSN1Q15811 1721 aa9.26□□□□□ -0.93
SDF2-205ENST00000587629 PPIP5K1Q6PFW1 1433 aa9.26□□□□□ -0.93
SDF2-205ENST00000587629 EZH2Q15910 746 aaKnown RBP9.26□□□□□ -0.93
SDF2-205ENST00000587629 CABP1Q9NZU7 370 aa9.26□□□□□ -0.93
SDF2-205ENST00000587629 APBA3O96018 575 aa9.25□□□□□ -0.93
SDF2-205ENST00000587629 GCP02774 474 aa9.25□□□□□ -0.93
SDF2-205ENST00000587629 PDE3BQ13370 1112 aa9.25□□□□□ -0.93
SDF2-205ENST00000587629 NEUROD1Q13562 356 aa9.25□□□□□ -0.93
SDF2-205ENST00000587629 FAM196AQ6ZSG2 479 aa9.25□□□□□ -0.93
SDF2-205ENST00000587629 NLRP13Q86W25 1043 aa9.25□□□□□ -0.93
SDF2-205ENST00000587629 L3MBTL2Q969R5 705 aa9.25□□□□□ -0.93
SDF2-205ENST00000587629 SIN3AQ96ST3 1273 aa9.25□□□□□ -0.93
SDF2-205ENST00000587629 PHRF1Q9P1Y6 1649 aaKnown RBP9.24□□□□□ -0.93
SDF2-205ENST00000587629 SSH2Q76I76 1423 aa9.24□□□□□ -0.93
SDF2-205ENST00000587629 THSD7AQ9UPZ6 1657 aa9.24□□□□□ -0.93
SDF2-205ENST00000587629 NLRP6P59044 892 aa9.24□□□□□ -0.93
SDF2-205ENST00000587629 TOPAZ1Q8N9V7 1692 aa9.23□□□□□ -0.93
SDF2-205ENST00000587629 CAMTA1Q9Y6Y1 1673 aa9.23□□□□□ -0.93
SDF2-205ENST00000587629 BARGINQ6ZT62 677 aa9.23□□□□□ -0.93
SDF2-205ENST00000587629 TCP11L2Q8N4U5 519 aa9.23□□□□□ -0.93
SDF2-205ENST00000587629 CAMKK2Q96RR4 588 aa9.23□□□□□ -0.93
SDF2-205ENST00000587629 USP19O94966 1318 aa9.23□□□□□ -0.93
SDF2-205ENST00000587629 KIAA1210Q9ULL0 1709 aa9.22□□□□□ -0.93
SDF2-205ENST00000587629 NRKQ7Z2Y5 1582 aa9.22□□□□□ -0.93
SDF2-205ENST00000587629 SOX12O15370 315 aa9.22□□□□□ -0.93
SDF2-205ENST00000587629 CPDO75976 1380 aa9.22□□□□□ -0.93
SDF2-205ENST00000587629 RGPD1P0DJD0 1748 aa9.22□□□□□ -0.93
SDF2-205ENST00000587629 SAMD1Q6SPF0 538 aaPredicted RBP9.2□□□□□ -0.94
SDF2-205ENST00000587629 TOM1L2Q6ZVM7 507 aa9.2□□□□□ -0.94
SDF2-205ENST00000587629 EVC2Q86UK5 1308 aa9.2□□□□□ -0.94
SDF2-205ENST00000587629 USP6P35125 1406 aa9.2□□□□□ -0.94
SDF2-205ENST00000587629 QRICH2Q9H0J4 1663 aa9.2□□□□□ -0.94
SDF2-205ENST00000587629 TNS1Q9HBL0 1735 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms