RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 LILRB3O75022 631 aa10.07□□□□□ -0.8
VMP1-205ENST00000587470 LYPD8Q6UX82 237 aa10.07□□□□□ -0.8
VMP1-205ENST00000587470 FAM117AQ9C073 453 aa10.07□□□□□ -0.8
VMP1-205ENST00000587470 ATP13A2Q9NQ11 1180 aa10.07□□□□□ -0.8
VMP1-205ENST00000587470 POLR3EQ9NVU0 708 aa10.07□□□□□ -0.8
VMP1-205ENST00000587470 SIAH2O43255 324 aa10.06□□□□□ -0.8
VMP1-205ENST00000587470 KCNH2Q12809 1159 aa10.06□□□□□ -0.8
VMP1-205ENST00000587470 NFX1Q12986 1120 aaKnown RBP10.06□□□□□ -0.8
VMP1-205ENST00000587470 QPCTQ16769 361 aa10.06□□□□□ -0.8
VMP1-205ENST00000587470 C11orf95C9JLR9 678 aaPredicted RBP10.04□□□□□ -0.8
VMP1-205ENST00000587470 SKIV2LQ15477 1246 aaKnown RBP10.04□□□□□ -0.8
VMP1-205ENST00000587470 SNRPBP14678 240 aaKnown RBP10.03□□□□□ -0.8
VMP1-205ENST00000587470 UNC93B1Q9H1C4 597 aa10.03□□□□□ -0.8
VMP1-205ENST00000587470 SH3D19Q5HYK7 790 aa10.02□□□□□ -0.81
VMP1-205ENST00000587470 RTL5Q5HYW3 569 aaPredicted RBP10.02□□□□□ -0.81
VMP1-205ENST00000587470 TSC1Q92574 1164 aa10.02□□□□□ -0.81
VMP1-205ENST00000587470 PLEKHG3A1L390 1219 aa10.01□□□□□ -0.81
VMP1-205ENST00000587470 CTHP32929 405 aa10.01□□□□□ -0.81
VMP1-205ENST00000587470 TRIM47Q96LD4 638 aa10.01□□□□□ -0.81
VMP1-205ENST00000587470 SH3BP2P78314 561 aa10□□□□□ -0.81
VMP1-205ENST00000587470 HELBQ8NG08 1087 aaPredicted RBP10□□□□□ -0.81
VMP1-205ENST00000587470 BAP1Q92560 729 aa10□□□□□ -0.81
VMP1-205ENST00000587470 PER1O15534 1290 aaPredicted RBP9.99□□□□□ -0.81
VMP1-205ENST00000587470 WFS1O76024 890 aa9.98□□□□□ -0.81
VMP1-205ENST00000587470 F12P00748 615 aaPredicted RBP9.98□□□□□ -0.81
VMP1-205ENST00000587470 NEUROD2Q15784 382 aa9.98□□□□□ -0.81
VMP1-205ENST00000587470 TPRNQ4KMQ1 711 aa9.98□□□□□ -0.81
VMP1-205ENST00000587470 EHBP1Q8NDI1 1231 aa9.98□□□□□ -0.81
VMP1-205ENST00000587470 ATP1B4Q9UN42 357 aaPredicted RBP9.98□□□□□ -0.81
VMP1-205ENST00000587470 LINC01559Q495D7 138 aa9.97□□□□□ -0.81
VMP1-205ENST00000587470 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.97□□□□□ -0.813e-6■■□□□ 12.1
VMP1-205ENST00000587470 ALDH1A1P00352 501 aa9.96□□□□□ -0.82
VMP1-205ENST00000587470 ZNF511Q8NB15 262 aa9.96□□□□□ -0.82
VMP1-205ENST00000587470 PROCA1Q8NCQ7 364 aaPredicted RBP9.96□□□□□ -0.82
VMP1-205ENST00000587470 MAP10Q9P2G4 905 aa9.96□□□□□ -0.82
VMP1-205ENST00000587470 WIPF1O43516 503 aa9.95□□□□□ -0.82
VMP1-205ENST00000587470 PPP2R2DQ66LE6 453 aa9.94□□□□□ -0.82
VMP1-205ENST00000587470 TRIM46Q7Z4K8 759 aa9.94□□□□□ -0.82
VMP1-205ENST00000587470 VARSP26640 1264 aaKnown RBP9.93□□□□□ -0.82
VMP1-205ENST00000587470 CTDSPL2Q05D32 466 aa9.93□□□□□ -0.82
VMP1-205ENST00000587470 SENP2Q9HC62 589 aa9.93□□□□□ -0.82
VMP1-205ENST00000587470 GOPCQ9HD26 462 aa9.93□□□□□ -0.82
VMP1-205ENST00000587470 TERTO14746 1132 aaKnown RBP9.92□□□□□ -0.82
VMP1-205ENST00000587470 ARMC2Q8NEN0 867 aa9.92□□□□□ -0.82
VMP1-205ENST00000587470 BRPF1P55201 1214 aaPredicted RBP9.91□□□□□ -0.82
VMP1-205ENST00000587470 IL27Q8NEV9 243 aa9.91□□□□□ -0.82
VMP1-205ENST00000587470 FBXO31Q5XUX0 539 aaPredicted RBP9.9□□□□□ -0.82
VMP1-205ENST00000587470 BMP1P13497 986 aa9.89□□□□□ -0.83
VMP1-205ENST00000587470 MPNDQ8N594 471 aa9.89□□□□□ -0.83
VMP1-205ENST00000587470 KIFC2Q96AC6 838 aa9.89□□□□□ -0.83
VMP1-205ENST00000587470 TLL2Q9Y6L7 1015 aa9.89□□□□□ -0.83
VMP1-205ENST00000587470 WASF2Q9Y6W5 498 aa9.89□□□□□ -0.83
VMP1-205ENST00000587470 FOXJ1Q92949 421 aa9.88□□□□□ -0.83
VMP1-205ENST00000587470 PCMTD1Q96MG8 357 aaPredicted RBP9.88□□□□□ -0.83
VMP1-205ENST00000587470 BPHLQ86WA6 291 aaPredicted RBP9.87□□□□□ -0.83
VMP1-205ENST00000587470 FAM174AQ8TBP5 190 aa9.87□□□□□ -0.83
VMP1-205ENST00000587470 AP1G2O75843 785 aa9.86□□□□□ -0.83
VMP1-205ENST00000587470 AGERQ15109 404 aa9.86□□□□□ -0.83
VMP1-205ENST00000587470 NBPF14Q5TI25 921 aa9.86□□□□□ -0.83
VMP1-205ENST00000587470 LRRN4Q8WUT4 740 aa9.86□□□□□ -0.83
VMP1-205ENST00000587470 CAPN5O15484 640 aaPredicted RBP9.85□□□□□ -0.83
VMP1-205ENST00000587470 GPKOWQ92917 476 aaPredicted RBP eCLIP9.85□□□□□ -0.837e-23■■□□□ 12.4
VMP1-205ENST00000587470 KLF16Q9BXK1 252 aaPredicted RBP9.85□□□□□ -0.83
VMP1-205ENST00000587470 RFC5P40937 340 aa9.84□□□□□ -0.83
VMP1-205ENST00000587470 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
VMP1-205ENST00000587470 C4orf48Q5BLP8 95 aa9.83□□□□□ -0.84
VMP1-205ENST00000587470 SH3RF1Q7Z6J0 888 aa9.83□□□□□ -0.84
VMP1-205ENST00000587470 CDK15Q96Q40 435 aa9.83□□□□□ -0.84
VMP1-205ENST00000587470 TIMP2P16035 220 aa9.81□□□□□ -0.84
VMP1-205ENST00000587470 NNTQ13423 1086 aa9.81□□□□□ -0.84
VMP1-205ENST00000587470 NR6A1Q15406 480 aa9.81□□□□□ -0.84
VMP1-205ENST00000587470 SH3BP5LQ7L8J4 393 aa9.81□□□□□ -0.84
VMP1-205ENST00000587470 ARID5BQ14865 1188 aa9.8□□□□□ -0.84
VMP1-205ENST00000587470 TMEM259Q4ZIN3 620 aa9.8□□□□□ -0.84
VMP1-205ENST00000587470 PDXDC2PQ6P474 469 aa9.8□□□□□ -0.84
VMP1-205ENST00000587470 NXF1Q9UBU9 619 aaKnown RBP9.8□□□□□ -0.84
VMP1-205ENST00000587470 STK17AQ9UEE5 414 aa9.8□□□□□ -0.84
VMP1-205ENST00000587470 FKBPLQ9UIM3 349 aa9.8□□□□□ -0.84
VMP1-205ENST00000587470 ADH1CP00326 375 aa9.79□□□□□ -0.84
VMP1-205ENST00000587470 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
VMP1-205ENST00000587470 ZFP42Q96MM3 310 aa9.79□□□□□ -0.84
VMP1-205ENST00000587470 C1QTNF2Q9BXJ5 285 aa9.79□□□□□ -0.84
VMP1-205ENST00000587470 ZC3H4Q9UPT8 1303 aaKnown RBP9.79□□□□□ -0.84
VMP1-205ENST00000587470 MAGEB6P1A0A0J9YX57 407 aa9.77□□□□□ -0.85
VMP1-205ENST00000587470 INSM1Q01101 510 aaPredicted RBP9.77□□□□□ -0.85
VMP1-205ENST00000587470 NR5A1Q13285 461 aa9.77□□□□□ -0.85
VMP1-205ENST00000587470 H3BM21 787 aa9.76□□□□□ -0.85
VMP1-205ENST00000587470 GRM5P41594 1212 aa9.76□□□□□ -0.85
VMP1-205ENST00000587470 NPAS3Q8IXF0 933 aa9.76□□□□□ -0.85
VMP1-205ENST00000587470 TRMT44Q8IYL2 757 aaKnown RBP9.76□□□□□ -0.85
VMP1-205ENST00000587470 PNMA1Q8ND90 353 aa9.76□□□□□ -0.85
VMP1-205ENST00000587470 HMX1Q9NP08 348 aaPredicted RBP9.76□□□□□ -0.85
VMP1-205ENST00000587470 NR3C2P08235 984 aa9.75□□□□□ -0.85
VMP1-205ENST00000587470 MRPL14Q6P1L8 145 aaKnown RBP9.75□□□□□ -0.85
VMP1-205ENST00000587470 EPS8L1Q8TE68 723 aa9.75□□□□□ -0.85
VMP1-205ENST00000587470 ARHGAP9Q9BRR9 750 aa9.75□□□□□ -0.85
VMP1-205ENST00000587470 CARD14Q9BXL6 1004 aa9.75□□□□□ -0.85
VMP1-205ENST00000587470 MAP4K5Q9Y4K4 846 aa9.75□□□□□ -0.85
VMP1-205ENST00000587470 ERBB4Q15303 1308 aa9.75□□□□□ -0.85
VMP1-205ENST00000587470 GMPRP36959 345 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms