RNA–Protein interactions for RNA: ENST00000587275.1

U2AF2-204, Transcript of U2 small nuclear RNA auxiliary factor 2, human

TSL 4

Gene U2AF2, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF2-204	ENST00000587275	QRICH2	Q9H0J4	1663 aa		29.41	■■■□□ 2.3
U2AF2-204	ENST00000587275	ONECUT3	O60422	494 aa	Predicted RBP	29.41	■■■□□ 2.3
U2AF2-204	ENST00000587275	BLM	P54132	1417 aa	Predicted RBP	29.4	■■■□□ 2.3
U2AF2-204	ENST00000587275	NBPF1	Q3BBV0	1214 aa		29.38	■■■□□ 2.29
U2AF2-204	ENST00000587275	NUDT16	Q96DE0	195 aa	Known RBP	29.38	■■■□□ 2.29
U2AF2-204	ENST00000587275	NGDN	Q8NEJ9	315 aa	Known RBP	29.37	■■■□□ 2.29
U2AF2-204	ENST00000587275	BTG4	Q9NY30	223 aa		29.37	■■■□□ 2.29
U2AF2-204	ENST00000587275	NRK	Q7Z2Y5	1582 aa		29.37	■■■□□ 2.29
U2AF2-204	ENST00000587275	CCDC125	Q86Z20	511 aa		29.36	■■■□□ 2.29
U2AF2-204	ENST00000587275	CCDC9	Q9Y3X0	531 aa	Known RBP	29.35	■■■□□ 2.29
U2AF2-204	ENST00000587275	POLR3A	O14802	1390 aa	Predicted RBP	29.35	■■■□□ 2.29
U2AF2-204	ENST00000587275	CDK19	Q9BWU1	502 aa		29.34	■■■□□ 2.29
U2AF2-204	ENST00000587275	TNS1	Q9HBL0	1735 aa	Known RBP	29.34	■■■□□ 2.29
U2AF2-204	ENST00000587275	TRPM1	Q7Z4N2	1603 aa		29.33	■■■□□ 2.29
U2AF2-204	ENST00000587275	RGPD1	P0DJD0	1748 aa		29.32	■■■□□ 2.28
U2AF2-204	ENST00000587275	PAK3	O75914	559 aa	Predicted RBP	29.32	■■■□□ 2.28
U2AF2-204	ENST00000587275	DEFB132	Q7Z7B7	95 aa		29.32	■■■□□ 2.28
U2AF2-204	ENST00000587275	LMO7	Q8WWI1	1683 aa		29.31	■■■□□ 2.28
U2AF2-204	ENST00000587275	FAM98C	Q17RN3	349 aa	Known RBP	29.3	■■■□□ 2.28
U2AF2-204	ENST00000587275	KRT27	Q7Z3Y8	459 aa		29.29	■■■□□ 2.28
U2AF2-204	ENST00000587275	KIAA0232	Q92628	1395 aa		29.28	■■■□□ 2.28
U2AF2-204	ENST00000587275	ACE	P12821	1306 aa		29.28	■■■□□ 2.28
U2AF2-204	ENST00000587275	SPATA31A5	Q5VU36	1347 aa		29.27	■■■□□ 2.28
U2AF2-204	ENST00000587275	SPATA31A7	Q8IWB4	1347 aa		29.27	■■■□□ 2.28
U2AF2-204	ENST00000587275	ZRANB1	Q9UGI0	708 aa		29.27	■■■□□ 2.28
U2AF2-204	ENST00000587275	NUTM2G	Q5VZR2	741 aa		29.26	■■■□□ 2.27
U2AF2-204	ENST00000587275	PRDM11	Q9NQV5	511 aa		29.24	■■■□□ 2.27
U2AF2-204	ENST00000587275	PLEKHG3	A1L390	1219 aa		29.23	■■■□□ 2.27
U2AF2-204	ENST00000587275	CHRNA2	Q15822	529 aa		29.23	■■■□□ 2.27
U2AF2-204	ENST00000587275	NBPF8	Q3BBV2	869 aa		29.23	■■■□□ 2.27
U2AF2-204	ENST00000587275	CAMTA1	Q9Y6Y1	1673 aa		29.22	■■■□□ 2.27
U2AF2-204	ENST00000587275	CCDC61	Q9Y6R9	512 aa		29.22	■■■□□ 2.27
U2AF2-204	ENST00000587275	PPIP5K1	Q6PFW1	1433 aa		29.21	■■■□□ 2.27
U2AF2-204	ENST00000587275	FAM182B	Q5T319	152 aa		29.21	■■■□□ 2.27
U2AF2-204	ENST00000587275		A0A0G2JS52	829 aa		29.2	■■■□□ 2.26
U2AF2-204	ENST00000587275	MYT1	Q01538	1121 aa		29.2	■■■□□ 2.26
U2AF2-204	ENST00000587275	PIK3C2A	O00443	1686 aa		29.19	■■■□□ 2.26
U2AF2-204	ENST00000587275	CENPJ	Q9HC77	1338 aa	Predicted RBP	29.19	■■■□□ 2.26
U2AF2-204	ENST00000587275	AKAP12	Q02952	1782 aa		29.18	■■■□□ 2.26
U2AF2-204	ENST00000587275	ZC3H6	P61129	1189 aa	Known RBP	29.18	■■■□□ 2.26
U2AF2-204	ENST00000587275	USP19	O94966	1318 aa		29.18	■■■□□ 2.26
U2AF2-204	ENST00000587275	SPATA31A1	Q5TZJ5	1347 aa		29.18	■■■□□ 2.26
U2AF2-204	ENST00000587275	L3MBTL2	Q969R5	705 aa		29.17	■■■□□ 2.26
U2AF2-204	ENST00000587275	CABP2	Q9NPB3	220 aa		29.16	■■■□□ 2.26
U2AF2-204	ENST00000587275	LRP5	O75197	1615 aa		29.16	■■■□□ 2.26
U2AF2-204	ENST00000587275	SIN3A	Q96ST3	1273 aa		29.15	■■■□□ 2.26
U2AF2-204	ENST00000587275	SSH2	Q76I76	1423 aa		29.14	■■■□□ 2.26
U2AF2-204	ENST00000587275	COL18A1	P39060	1754 aa		29.13	■■■□□ 2.25
U2AF2-204	ENST00000587275	WNK3	Q9BYP7	1800 aa		29.13	■■■□□ 2.25
U2AF2-204	ENST00000587275	RGPD5	Q99666	1765 aa		29.12	■■■□□ 2.25
U2AF2-204	ENST00000587275	SLIT3	O75094	1523 aa		29.12	■■■□□ 2.25
U2AF2-204	ENST00000587275	SRPK2	P78362	688 aa	Known RBP	29.12	■■■□□ 2.25
U2AF2-204	ENST00000587275	SF3B2	Q13435	895 aa	Known RBP	29.12	■■■□□ 2.25
U2AF2-204	ENST00000587275	CPD	O75976	1380 aa		29.12	■■■□□ 2.25
U2AF2-204	ENST00000587275	PARP4	Q9UKK3	1724 aa	Known RBP	29.11	■■■□□ 2.25
U2AF2-204	ENST00000587275	ABTB2	Q8N961	1025 aa		29.11	■■■□□ 2.25
U2AF2-204	ENST00000587275	STRN4	Q9NRL3	753 aa		29.11	■■■□□ 2.25
U2AF2-204	ENST00000587275	USP6	P35125	1406 aa		29.11	■■■□□ 2.25
U2AF2-204	ENST00000587275	RREB1	Q92766	1687 aa		29.09	■■■□□ 2.25
U2AF2-204	ENST00000587275	DISP2	A7MBM2	1401 aa		29.08	■■■□□ 2.25
U2AF2-204	ENST00000587275	COL5A2	P05997	1499 aa	Predicted RBP	29.07	■■■□□ 2.24
U2AF2-204	ENST00000587275	LARP1	Q6PKG0	1096 aa	Known RBP	29.05	■■■□□ 2.24
U2AF2-204	ENST00000587275	NUP188	Q5SRE5	1749 aa		29.05	■■■□□ 2.24
U2AF2-204	ENST00000587275	MON2	Q7Z3U7	1717 aa		29.05	■■■□□ 2.24
U2AF2-204	ENST00000587275	PEAK1	Q9H792	1746 aa		29.04	■■■□□ 2.24
U2AF2-204	ENST00000587275	BAG6	P46379	1132 aa		29.04	■■■□□ 2.24
U2AF2-204	ENST00000587275	EN1	Q05925	392 aa	Predicted RBP	29.04	■■■□□ 2.24
U2AF2-204	ENST00000587275	CABP1	Q9NZU7	370 aa		29.04	■■■□□ 2.24
U2AF2-204	ENST00000587275	USP35	Q9P2H5	1018 aa		29.04	■■■□□ 2.24
U2AF2-204	ENST00000587275	SBF2	Q86WG5	1849 aa		29.04	■■■□□ 2.24
U2AF2-204	ENST00000587275	LRRC37A3	O60309	1634 aa		29.03	■■■□□ 2.24
U2AF2-204	ENST00000587275	GC	P02774	474 aa		29.02	■■■□□ 2.24
U2AF2-204	ENST00000587275	PSD	A5PKW4	1024 aa	Predicted RBP	29.01	■■■□□ 2.23
U2AF2-204	ENST00000587275	BRD4	O60885	1362 aa	Predicted RBP	29.01	■■■□□ 2.23
U2AF2-204	ENST00000587275	BARGIN	Q6ZT62	677 aa		29	■■■□□ 2.23
U2AF2-204	ENST00000587275	NEUROD1	Q13562	356 aa		28.99	■■■□□ 2.23
U2AF2-204	ENST00000587275	NLRP13	Q86W25	1043 aa		28.99	■■■□□ 2.23
U2AF2-204	ENST00000587275	ROCK2	O75116	1388 aa	Known RBP	28.99	■■■□□ 2.23
U2AF2-204	ENST00000587275	TRIM37	O94972	964 aa		28.96	■■■□□ 2.23
U2AF2-204	ENST00000587275	USP54	Q70EL1	1684 aa		28.96	■■■□□ 2.23
U2AF2-204	ENST00000587275	EVA1C	P58658	441 aa		28.95	■■■□□ 2.22
U2AF2-204	ENST00000587275	EZH2	Q15910	746 aa	Known RBP	28.95	■■■□□ 2.22
U2AF2-204	ENST00000587275	EVC2	Q86UK5	1308 aa		28.94	■■■□□ 2.22
U2AF2-204	ENST00000587275	NFAT5	O94916	1531 aa		28.94	■■■□□ 2.22
U2AF2-204	ENST00000587275	CRB1	P82279	1406 aa		28.94	■■■□□ 2.22
U2AF2-204	ENST00000587275	TCP11L2	Q8N4U5	519 aa		28.93	■■■□□ 2.22
U2AF2-204	ENST00000587275	NLRP6	P59044	892 aa		28.92	■■■□□ 2.22
U2AF2-204	ENST00000587275	FAM196A	Q6ZSG2	479 aa		28.92	■■■□□ 2.22
U2AF2-204	ENST00000587275	CAMKK2	Q96RR4	588 aa		28.92	■■■□□ 2.22
U2AF2-204	ENST00000587275	CPSF1	Q10570	1443 aa	Known RBP	28.92	■■■□□ 2.22
U2AF2-204	ENST00000587275	AATK	Q6ZMQ8	1374 aa		28.91	■■■□□ 2.22
U2AF2-204	ENST00000587275	LTN1	O94822	1766 aa		28.9	■■■□□ 2.22
U2AF2-204	ENST00000587275	RGPD3	A6NKT7	1758 aa	Predicted RBP	28.88	■■■□□ 2.21
U2AF2-204	ENST00000587275	RGPD4	Q7Z3J3	1758 aa		28.88	■■■□□ 2.21
U2AF2-204	ENST00000587275	ZBTB7C	A1YPR0	619 aa		28.88	■■■□□ 2.21
U2AF2-204	ENST00000587275	CD163L1	Q9NR16	1453 aa		28.88	■■■□□ 2.21
U2AF2-204	ENST00000587275	TTC21B	Q7Z4L5	1316 aa		28.88	■■■□□ 2.21
U2AF2-204	ENST00000587275	R3HDM1	Q15032	1099 aa	Known RBP	28.87	■■■□□ 2.21
U2AF2-204	ENST00000587275	AXIN2	Q9Y2T1	843 aa		28.87	■■■□□ 2.21
U2AF2-204	ENST00000587275	THRAP3	Q9Y2W1	955 aa	Known RBP	28.86	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms