RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 KRT27Q7Z3Y8 459 aa22.84■■□□□ 1.25
VAT1-205ENST00000587173 NUDT16Q96DE0 195 aaKnown RBP22.84■■□□□ 1.25
VAT1-205ENST00000587173 BRWD3Q6RI45 1802 aa22.82■■□□□ 1.24
VAT1-205ENST00000587173 SF3B2Q13435 895 aaKnown RBP22.82■■□□□ 1.24
VAT1-205ENST00000587173 NRAPQ86VF7 1730 aa22.82■■□□□ 1.24
VAT1-205ENST00000587173 FAM98CQ17RN3 349 aaKnown RBP22.81■■□□□ 1.24
VAT1-205ENST00000587173 DEFB132Q7Z7B7 95 aa22.81■■□□□ 1.24
VAT1-205ENST00000587173 CDK19Q9BWU1 502 aa22.81■■□□□ 1.24
VAT1-205ENST00000587173 COL14A1Q05707 1796 aaKnown RBP22.81■■□□□ 1.24
VAT1-205ENST00000587173 PRDM11Q9NQV5 511 aa22.79■■□□□ 1.24
VAT1-205ENST00000587173 ITSN1Q15811 1721 aa22.78■■□□□ 1.24
VAT1-205ENST00000587173 CRYBG1Q9Y4K1 1723 aa22.77■■□□□ 1.23
VAT1-205ENST00000587173 NBPF1Q3BBV0 1214 aa22.76■■□□□ 1.23
VAT1-205ENST00000587173 CCDC61Q9Y6R9 512 aa22.76■■□□□ 1.23
VAT1-205ENST00000587173 SPATA31A5Q5VU36 1347 aa22.76■■□□□ 1.23
VAT1-205ENST00000587173 SPATA31A7Q8IWB4 1347 aa22.76■■□□□ 1.23
VAT1-205ENST00000587173 ACEP12821 1306 aa22.75■■□□□ 1.23
VAT1-205ENST00000587173 POLR3AO14802 1390 aaPredicted RBP22.75■■□□□ 1.23
VAT1-205ENST00000587173 KIAA0232Q92628 1395 aa22.75■■□□□ 1.23
VAT1-205ENST00000587173 KIAA1210Q9ULL0 1709 aa22.74■■□□□ 1.23
VAT1-205ENST00000587173 SRCAPQ6ZRS2 3230 aa22.74■■□□□ 1.23
VAT1-205ENST00000587173 NUTM2GQ5VZR2 741 aa22.74■■□□□ 1.23
VAT1-205ENST00000587173 NBPF8Q3BBV2 869 aa22.73■■□□□ 1.23
VAT1-205ENST00000587173 PLEKHG3A1L390 1219 aa22.72■■□□□ 1.23
VAT1-205ENST00000587173 CHRNA2Q15822 529 aa22.72■■□□□ 1.23
VAT1-205ENST00000587173 TOPAZ1Q8N9V7 1692 aa22.71■■□□□ 1.23
VAT1-205ENST00000587173 ZC3H6P61129 1189 aaKnown RBP22.71■■□□□ 1.23
VAT1-205ENST00000587173 BAG6P46379 1132 aa22.7■■□□□ 1.22
VAT1-205ENST00000587173 PHRF1Q9P1Y6 1649 aaKnown RBP22.69■■□□□ 1.22
VAT1-205ENST00000587173 CENPJQ9HC77 1338 aaPredicted RBP22.69■■□□□ 1.22
VAT1-205ENST00000587173 SRPK2P78362 688 aaKnown RBP22.69■■□□□ 1.22
VAT1-205ENST00000587173 STRN4Q9NRL3 753 aa22.69■■□□□ 1.22
VAT1-205ENST00000587173 SPATA31A1Q5TZJ5 1347 aa22.68■■□□□ 1.22
VAT1-205ENST00000587173 FAM182BQ5T319 152 aa22.68■■□□□ 1.22
VAT1-205ENST00000587173 ABTB2Q8N961 1025 aa22.67■■□□□ 1.22
VAT1-205ENST00000587173 THSD7AQ9UPZ6 1657 aa22.67■■□□□ 1.22
VAT1-205ENST00000587173 CABP2Q9NPB3 220 aa22.66■■□□□ 1.22
VAT1-205ENST00000587173 PPIP5K1Q6PFW1 1433 aa22.65■■□□□ 1.22
VAT1-205ENST00000587173 NRKQ7Z2Y5 1582 aa22.63■■□□□ 1.21
VAT1-205ENST00000587173 USP19O94966 1318 aa22.63■■□□□ 1.21
VAT1-205ENST00000587173 EVA1CP58658 441 aa22.62■■□□□ 1.21
VAT1-205ENST00000587173 EN1Q05925 392 aaPredicted RBP22.62■■□□□ 1.21
VAT1-205ENST00000587173 L3MBTL2Q969R5 705 aa22.62■■□□□ 1.21
VAT1-205ENST00000587173 USP35Q9P2H5 1018 aa22.62■■□□□ 1.21
VAT1-205ENST00000587173 SSH2Q76I76 1423 aa22.62■■□□□ 1.21
VAT1-205ENST00000587173 NLRP13Q86W25 1043 aa22.61■■□□□ 1.21
VAT1-205ENST00000587173 CPDO75976 1380 aa22.61■■□□□ 1.21
VAT1-205ENST00000587173 PSDA5PKW4 1024 aaPredicted RBP22.59■■□□□ 1.21
VAT1-205ENST00000587173 RGPD1P0DJD0 1748 aa22.58■■□□□ 1.21
VAT1-205ENST00000587173 GCP02774 474 aa22.58■■□□□ 1.21
VAT1-205ENST00000587173 LARP1Q6PKG0 1096 aaKnown RBP22.58■■□□□ 1.21
VAT1-205ENST00000587173 BARGINQ6ZT62 677 aa22.58■■□□□ 1.21
VAT1-205ENST00000587173 CABP1Q9NZU7 370 aa22.58■■□□□ 1.21
VAT1-205ENST00000587173 BRD4O60885 1362 aaPredicted RBP22.58■■□□□ 1.21
VAT1-205ENST00000587173 QRICH2Q9H0J4 1663 aa22.58■■□□□ 1.2
VAT1-205ENST00000587173 CAMTA1Q9Y6Y1 1673 aa22.58■■□□□ 1.2
VAT1-205ENST00000587173 DISP2A7MBM2 1401 aa22.57■■□□□ 1.2
VAT1-205ENST00000587173 FAM196AQ6ZSG2 479 aa22.57■■□□□ 1.2
VAT1-205ENST00000587173 SIN3AQ96ST3 1273 aa22.57■■□□□ 1.2
VAT1-205ENST00000587173 USP6P35125 1406 aa22.56■■□□□ 1.2
VAT1-205ENST00000587173 TRIM37O94972 964 aa22.55■■□□□ 1.2
VAT1-205ENST00000587173 TCP11L2Q8N4U5 519 aa22.55■■□□□ 1.2
VAT1-205ENST00000587173 LMO7Q8WWI1 1683 aa22.55■■□□□ 1.2
VAT1-205ENST00000587173 PDE3BQ13370 1112 aa22.54■■□□□ 1.2
VAT1-205ENST00000587173 EVC2Q86UK5 1308 aa22.54■■□□□ 1.2
VAT1-205ENST00000587173 NEUROD1Q13562 356 aa22.53■■□□□ 1.2
VAT1-205ENST00000587173 EZH2Q15910 746 aaKnown RBP22.53■■□□□ 1.2
VAT1-205ENST00000587173 TNS1Q9HBL0 1735 aaKnown RBP22.53■■□□□ 1.2
VAT1-205ENST00000587173 ROCK2O75116 1388 aaKnown RBP22.52■■□□□ 1.2
VAT1-205ENST00000587173 ZBTB7CA1YPR0 619 aa22.52■■□□□ 1.2
VAT1-205ENST00000587173 NLRP6P59044 892 aa22.52■■□□□ 1.2
VAT1-205ENST00000587173 LRP5O75197 1615 aa22.51■■□□□ 1.19
VAT1-205ENST00000587173 THRAP3Q9Y2W1 955 aaKnown RBP22.51■■□□□ 1.19
VAT1-205ENST00000587173 COL5A2P05997 1499 aaPredicted RBP22.51■■□□□ 1.19
VAT1-205ENST00000587173 TRPM1Q7Z4N2 1603 aa22.5■■□□□ 1.19
VAT1-205ENST00000587173 APBA3O96018 575 aa22.49■■□□□ 1.19
VAT1-205ENST00000587173 R3HDM1Q15032 1099 aaKnown RBP22.49■■□□□ 1.19
VAT1-205ENST00000587173 CAMKK2Q96RR4 588 aa22.49■■□□□ 1.19
VAT1-205ENST00000587173 SLIT3O75094 1523 aa22.48■■□□□ 1.19
VAT1-205ENST00000587173 AATKQ6ZMQ8 1374 aa22.47■■□□□ 1.19
VAT1-205ENST00000587173 CRB1P82279 1406 aa22.47■■□□□ 1.19
VAT1-205ENST00000587173 PARD3Q8TEW0 1356 aa22.45■■□□□ 1.18
VAT1-205ENST00000587173 TTC21BQ7Z4L5 1316 aa22.44■■□□□ 1.18
VAT1-205ENST00000587173 ZNF692Q9BU19 519 aaPredicted RBP22.44■■□□□ 1.18
VAT1-205ENST00000587173 PIK3C2AO00443 1686 aa22.43■■□□□ 1.18
VAT1-205ENST00000587173 TOM1L2Q6ZVM7 507 aa22.42■■□□□ 1.18
VAT1-205ENST00000587173 CPSF1Q10570 1443 aaKnown RBP22.4■■□□□ 1.18
VAT1-205ENST00000587173 PARP4Q9UKK3 1724 aaKnown RBP22.4■■□□□ 1.18
VAT1-205ENST00000587173 TTC21AQ8NDW8 1320 aa22.4■■□□□ 1.18
VAT1-205ENST00000587173 AXIN2Q9Y2T1 843 aa22.4■■□□□ 1.18
VAT1-205ENST00000587173 C11orf95C9JLR9 678 aaPredicted RBP22.39■■□□□ 1.17
VAT1-205ENST00000587173 SOX12O15370 315 aa22.39■■□□□ 1.17
VAT1-205ENST00000587173 KCNH5Q8NCM2 988 aa22.39■■□□□ 1.17
VAT1-205ENST00000587173 WDR17Q8IZU2 1322 aa22.38■■□□□ 1.17
VAT1-205ENST00000587173 ARHGEF25Q86VW2 580 aa22.38■■□□□ 1.17
VAT1-205ENST00000587173 OVOS2A0A0G2JMS6 1433 aa22.38■■□□□ 1.17
VAT1-205ENST00000587173 OVOS2A0A0J9YW53 1432 aa22.38■■□□□ 1.17
VAT1-205ENST00000587173 OVOS2Q6IE36 1432 aa22.38■■□□□ 1.17
VAT1-205ENST00000587173 DDB1Q16531 1140 aa22.37■■□□□ 1.17
VAT1-205ENST00000587173 KTN1Q86UP2 1357 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms