RNA–Protein interactions for RNA: ENST00000587098.1

CCDC130-207, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 617 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-207ENST00000587098 ATAD2Q6PL18 1390 aa20.64■□□□□ 0.89
CCDC130-207ENST00000587098 USP47Q96K76 1375 aa20.64■□□□□ 0.89
CCDC130-207ENST00000587098 QTRT2Q9H974 415 aaKnown RBP20.64■□□□□ 0.89
CCDC130-207ENST00000587098 NUTM2GQ5VZR2 741 aa20.63■□□□□ 0.89
CCDC130-207ENST00000587098 USP21Q9UK80 565 aa20.63■□□□□ 0.89
CCDC130-207ENST00000587098 SOCS7O14512 581 aa20.62■□□□□ 0.89
CCDC130-207ENST00000587098 ABTB2Q8N961 1025 aa20.62■□□□□ 0.89
CCDC130-207ENST00000587098 SLC24A1O60721 1099 aa20.61■□□□□ 0.89
CCDC130-207ENST00000587098 PUS7Q96PZ0 661 aaKnown RBP20.61■□□□□ 0.89
CCDC130-207ENST00000587098 ZNF692Q9BU19 519 aaPredicted RBP20.61■□□□□ 0.89
CCDC130-207ENST00000587098 RXRBP28702 533 aa20.6■□□□□ 0.89
CCDC130-207ENST00000587098 MARF1Q9Y4F3 1742 aaKnown RBP20.6■□□□□ 0.89
CCDC130-207ENST00000587098 USP6P35125 1406 aa20.6■□□□□ 0.89
CCDC130-207ENST00000587098 TMC1Q8TDI8 760 aa20.59■□□□□ 0.89
CCDC130-207ENST00000587098 SLC12A5Q9H2X9 1139 aa20.59■□□□□ 0.89
CCDC130-207ENST00000587098 BRD4O60885 1362 aaPredicted RBP20.59■□□□□ 0.89
CCDC130-207ENST00000587098 FAM83GA6ND36 823 aa20.58■□□□□ 0.89
CCDC130-207ENST00000587098 BCL9LQ86UU0 1499 aa20.57■□□□□ 0.88
CCDC130-207ENST00000587098 TRPC5Q9UL62 973 aaPredicted RBP20.57■□□□□ 0.88
CCDC130-207ENST00000587098 ABCA3Q99758 1704 aa20.56■□□□□ 0.88
CCDC130-207ENST00000587098 CPSF1Q10570 1443 aaKnown RBP20.56■□□□□ 0.88
CCDC130-207ENST00000587098 SSH2Q76I76 1423 aa20.56■□□□□ 0.88
CCDC130-207ENST00000587098 RBM6P78332 1123 aaKnown RBP20.56■□□□□ 0.88
CCDC130-207ENST00000587098 TMF1P82094 1093 aa20.56■□□□□ 0.88
CCDC130-207ENST00000587098 NLRP13Q86W25 1043 aa20.56■□□□□ 0.88
CCDC130-207ENST00000587098 TTC21BQ7Z4L5 1316 aa20.55■□□□□ 0.88
CCDC130-207ENST00000587098 SLIT2O94813 1529 aa20.55■□□□□ 0.88
CCDC130-207ENST00000587098 UNC5CLQ8IV45 518 aa20.55■□□□□ 0.88
CCDC130-207ENST00000587098 KTN1Q86UP2 1357 aaKnown RBP20.54■□□□□ 0.88
CCDC130-207ENST00000587098 NLRP6P59044 892 aa20.53■□□□□ 0.88
CCDC130-207ENST00000587098 CRYBG1Q9Y4K1 1723 aa20.53■□□□□ 0.88
CCDC130-207ENST00000587098 ATRNO75882 1429 aa20.53■□□□□ 0.88
CCDC130-207ENST00000587098 AKAP12Q02952 1782 aa20.52■□□□□ 0.88
CCDC130-207ENST00000587098 CD163L1Q9NR16 1453 aa20.52■□□□□ 0.88
CCDC130-207ENST00000587098 ZC3H6P61129 1189 aaKnown RBP20.52■□□□□ 0.88
CCDC130-207ENST00000587098 USP19O94966 1318 aa20.52■□□□□ 0.87
CCDC130-207ENST00000587098 HDGFL2Q7Z4V5 671 aaPredicted RBP20.51■□□□□ 0.87
CCDC130-207ENST00000587098 GCP02774 474 aa20.5■□□□□ 0.87
CCDC130-207ENST00000587098 EIF4G2P78344 907 aaKnown RBP eCLIP20.5■□□□□ 0.87
CCDC130-207ENST00000587098 PRDM11Q9NQV5 511 aa20.5■□□□□ 0.87
CCDC130-207ENST00000587098 BTG4Q9NY30 223 aa20.5■□□□□ 0.87
CCDC130-207ENST00000587098 TERF2IPQ9NYB0 399 aa20.5■□□□□ 0.87
CCDC130-207ENST00000587098 TTC21AQ8NDW8 1320 aa20.5■□□□□ 0.87
CCDC130-207ENST00000587098 KIAA0232Q92628 1395 aa20.49■□□□□ 0.87
CCDC130-207ENST00000587098 HSPA5P11021 654 aaKnown RBP20.49■□□□□ 0.87
CCDC130-207ENST00000587098 CHRNA2Q15822 529 aa20.49■□□□□ 0.87
CCDC130-207ENST00000587098 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.49■□□□□ 0.87
CCDC130-207ENST00000587098 GJD4Q96KN9 370 aaPredicted RBP20.49■□□□□ 0.87
CCDC130-207ENST00000587098 CDCA8Q53HL2 280 aa20.48■□□□□ 0.87
CCDC130-207ENST00000587098 A0A1W2PP64 1363 aa20.47■□□□□ 0.87
CCDC130-207ENST00000587098 PHRF1Q9P1Y6 1649 aaKnown RBP20.47■□□□□ 0.87
CCDC130-207ENST00000587098 NINLQ9Y2I6 1382 aa20.46■□□□□ 0.87
CCDC130-207ENST00000587098 CDK12Q9NYV4 1490 aaPredicted RBP20.46■□□□□ 0.87
CCDC130-207ENST00000587098 VPS72Q15906 364 aa20.46■□□□□ 0.87
CCDC130-207ENST00000587098 ZRANB1Q9UGI0 708 aa20.46■□□□□ 0.87
CCDC130-207ENST00000587098 PIK3C2AO00443 1686 aa20.45■□□□□ 0.86
CCDC130-207ENST00000587098 PLCH1Q4KWH8 1693 aa20.45■□□□□ 0.86
CCDC130-207ENST00000587098 MON2Q7Z3U7 1717 aa20.45■□□□□ 0.86
CCDC130-207ENST00000587098 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.45■□□□□ 0.86
CCDC130-207ENST00000587098 COL14A1Q05707 1796 aaKnown RBP20.45■□□□□ 0.86
CCDC130-207ENST00000587098 NWD2Q9ULI1 1742 aa20.44■□□□□ 0.86
CCDC130-207ENST00000587098 NME9Q86XW9 330 aa20.44■□□□□ 0.86
CCDC130-207ENST00000587098 NRKQ7Z2Y5 1582 aa20.43■□□□□ 0.86
CCDC130-207ENST00000587098 CCDC9Q9Y3X0 531 aaKnown RBP20.43■□□□□ 0.86
CCDC130-207ENST00000587098 CPDO75976 1380 aa20.43■□□□□ 0.86
CCDC130-207ENST00000587098 RGS12O14924 1447 aa20.43■□□□□ 0.86
CCDC130-207ENST00000587098 EDC4Q6P2E9 1401 aaKnown RBP20.43■□□□□ 0.86
CCDC130-207ENST00000587098 USP31Q70CQ4 1352 aa20.41■□□□□ 0.86
CCDC130-207ENST00000587098 ANKRD36BQ8N2N9 1353 aa20.41■□□□□ 0.86
CCDC130-207ENST00000587098 SLIT3O75094 1523 aa20.41■□□□□ 0.86
CCDC130-207ENST00000587098 ZBTB7CA1YPR0 619 aa20.4■□□□□ 0.86
CCDC130-207ENST00000587098 SOX12O15370 315 aa20.4■□□□□ 0.86
CCDC130-207ENST00000587098 KCNH5Q8NCM2 988 aa20.4■□□□□ 0.86
CCDC130-207ENST00000587098 GLI3P10071 1580 aa20.39■□□□□ 0.85
CCDC130-207ENST00000587098 STRN4Q9NRL3 753 aa20.39■□□□□ 0.85
CCDC130-207ENST00000587098 NRAPQ86VF7 1730 aa20.39■□□□□ 0.85
CCDC130-207ENST00000587098 EVA1CP58658 441 aa20.38■□□□□ 0.85
CCDC130-207ENST00000587098 ARHGEF25Q86VW2 580 aa20.38■□□□□ 0.85
CCDC130-207ENST00000587098 POLR3GLQ9BT43 218 aa20.38■□□□□ 0.85
CCDC130-207ENST00000587098 CAMTA1Q9Y6Y1 1673 aa20.37■□□□□ 0.85
CCDC130-207ENST00000587098 SPATA31A5Q5VU36 1347 aa20.36■□□□□ 0.85
CCDC130-207ENST00000587098 SPATA31A7Q8IWB4 1347 aa20.36■□□□□ 0.85
CCDC130-207ENST00000587098 C11orf95C9JLR9 678 aaPredicted RBP20.36■□□□□ 0.85
CCDC130-207ENST00000587098 ONECUT3O60422 494 aaPredicted RBP20.36■□□□□ 0.85
CCDC130-207ENST00000587098 AATKQ6ZMQ8 1374 aa20.34■□□□□ 0.85
CCDC130-207ENST00000587098 SEPT12Q8IYM1 358 aa20.34■□□□□ 0.85
CCDC130-207ENST00000587098 CARD14Q9BXL6 1004 aa20.34■□□□□ 0.85
CCDC130-207ENST00000587098 AXIN2Q9Y2T1 843 aa20.34■□□□□ 0.85
CCDC130-207ENST00000587098 LMO7Q8WWI1 1683 aa20.33■□□□□ 0.85
CCDC130-207ENST00000587098 FYB1O15117 783 aa20.33■□□□□ 0.85
CCDC130-207ENST00000587098 FAM98CQ17RN3 349 aaKnown RBP20.33■□□□□ 0.85
CCDC130-207ENST00000587098 LARP1Q6PKG0 1096 aaKnown RBP20.33■□□□□ 0.85
CCDC130-207ENST00000587098 SPATA31A1Q5TZJ5 1347 aa20.32■□□□□ 0.84
CCDC130-207ENST00000587098 UPF1Q92900 1129 aaKnown RBP eCLIP20.32■□□□□ 0.84
CCDC130-207ENST00000587098 COG3Q96JB2 828 aa20.32■□□□□ 0.84
CCDC130-207ENST00000587098 NFAT5O94916 1531 aa20.32■□□□□ 0.84
CCDC130-207ENST00000587098 OVOS2A0A0J9YW53 1432 aa20.31■□□□□ 0.84
CCDC130-207ENST00000587098 OVOS2Q6IE36 1432 aa20.31■□□□□ 0.84
CCDC130-207ENST00000587098 MYOM1P52179 1685 aa20.31■□□□□ 0.84
CCDC130-207ENST00000587098 USP54Q70EL1 1684 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms