RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 NUDT16Q96DE0 195 aaKnown RBP20.38■□□□□ 0.85
ATG4D-206ENST00000586863 CCDC125Q86Z20 511 aa20.37■□□□□ 0.85
ATG4D-206ENST00000586863 BLMP54132 1417 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-206ENST00000586863 ONECUT3O60422 494 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-206ENST00000586863 PAK3O75914 559 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-206ENST00000586863 BTG4Q9NY30 223 aa20.36■□□□□ 0.85
ATG4D-206ENST00000586863 PHRF1Q9P1Y6 1649 aaKnown RBP20.35■□□□□ 0.85
ATG4D-206ENST00000586863 NBPF1Q3BBV0 1214 aa20.35■□□□□ 0.85
ATG4D-206ENST00000586863 CDK19Q9BWU1 502 aa20.35■□□□□ 0.85
ATG4D-206ENST00000586863 POLR3AO14802 1390 aaPredicted RBP20.32■□□□□ 0.84
ATG4D-206ENST00000586863 FAM98CQ17RN3 349 aaKnown RBP20.31■□□□□ 0.84
ATG4D-206ENST00000586863 KRT27Q7Z3Y8 459 aa20.31■□□□□ 0.84
ATG4D-206ENST00000586863 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
ATG4D-206ENST00000586863 PRDM11Q9NQV5 511 aa20.3■□□□□ 0.84
ATG4D-206ENST00000586863 ACEP12821 1306 aa20.29■□□□□ 0.84
ATG4D-206ENST00000586863 QRICH2Q9H0J4 1663 aa20.29■□□□□ 0.84
ATG4D-206ENST00000586863 A0A0G2JS52 829 aa20.29■□□□□ 0.84
ATG4D-206ENST00000586863 MYT1Q01538 1121 aa20.29■□□□□ 0.84
ATG4D-206ENST00000586863 DEFB132Q7Z7B7 95 aa20.29■□□□□ 0.84
ATG4D-206ENST00000586863 CCDC61Q9Y6R9 512 aa20.29■□□□□ 0.84
ATG4D-206ENST00000586863 KIAA0232Q92628 1395 aa20.29■□□□□ 0.84
ATG4D-206ENST00000586863 THSD7AQ9UPZ6 1657 aa20.29■□□□□ 0.84
ATG4D-206ENST00000586863 SPATA31A5Q5VU36 1347 aa20.28■□□□□ 0.84
ATG4D-206ENST00000586863 SPATA31A7Q8IWB4 1347 aa20.28■□□□□ 0.84
ATG4D-206ENST00000586863 NUTM2GQ5VZR2 741 aa20.28■□□□□ 0.84
ATG4D-206ENST00000586863 NRKQ7Z2Y5 1582 aa20.27■□□□□ 0.84
ATG4D-206ENST00000586863 PLEKHG3A1L390 1219 aa20.27■□□□□ 0.84
ATG4D-206ENST00000586863 NBPF8Q3BBV2 869 aa20.27■□□□□ 0.84
ATG4D-206ENST00000586863 CENPJQ9HC77 1338 aaPredicted RBP20.27■□□□□ 0.83
ATG4D-206ENST00000586863 CHRNA2Q15822 529 aa20.26■□□□□ 0.83
ATG4D-206ENST00000586863 PPIP5K1Q6PFW1 1433 aa20.25■□□□□ 0.83
ATG4D-206ENST00000586863 ZC3H6P61129 1189 aaKnown RBP20.24■□□□□ 0.83
ATG4D-206ENST00000586863 SF3B2Q13435 895 aaKnown RBP20.24■□□□□ 0.83
ATG4D-206ENST00000586863 L3MBTL2Q969R5 705 aa20.24■□□□□ 0.83
ATG4D-206ENST00000586863 TRPM1Q7Z4N2 1603 aa20.24■□□□□ 0.83
ATG4D-206ENST00000586863 SRPK2P78362 688 aaKnown RBP20.23■□□□□ 0.83
ATG4D-206ENST00000586863 CABP2Q9NPB3 220 aa20.23■□□□□ 0.83
ATG4D-206ENST00000586863 RGPD1P0DJD0 1748 aa20.22■□□□□ 0.83
ATG4D-206ENST00000586863 FAM182BQ5T319 152 aa20.21■□□□□ 0.83
ATG4D-206ENST00000586863 ABTB2Q8N961 1025 aa20.21■□□□□ 0.83
ATG4D-206ENST00000586863 SIN3AQ96ST3 1273 aa20.21■□□□□ 0.83
ATG4D-206ENST00000586863 USP19O94966 1318 aa20.21■□□□□ 0.83
ATG4D-206ENST00000586863 SPATA31A1Q5TZJ5 1347 aa20.21■□□□□ 0.83
ATG4D-206ENST00000586863 LMO7Q8WWI1 1683 aa20.2■□□□□ 0.82
ATG4D-206ENST00000586863 STRN4Q9NRL3 753 aa20.2■□□□□ 0.82
ATG4D-206ENST00000586863 CAMTA1Q9Y6Y1 1673 aa20.19■□□□□ 0.82
ATG4D-206ENST00000586863 TNS1Q9HBL0 1735 aaKnown RBP20.19■□□□□ 0.82
ATG4D-206ENST00000586863 SSH2Q76I76 1423 aa20.19■□□□□ 0.82
ATG4D-206ENST00000586863 CPDO75976 1380 aa20.17■□□□□ 0.82
ATG4D-206ENST00000586863 BAG6P46379 1132 aa20.16■□□□□ 0.82
ATG4D-206ENST00000586863 USP6P35125 1406 aa20.16■□□□□ 0.82
ATG4D-206ENST00000586863 PIK3C2AO00443 1686 aa20.14■□□□□ 0.81
ATG4D-206ENST00000586863 NEUROD1Q13562 356 aa20.14■□□□□ 0.81
ATG4D-206ENST00000586863 CABP1Q9NZU7 370 aa20.14■□□□□ 0.81
ATG4D-206ENST00000586863 USP35Q9P2H5 1018 aa20.14■□□□□ 0.81
ATG4D-206ENST00000586863 BRD4O60885 1362 aaPredicted RBP20.13■□□□□ 0.81
ATG4D-206ENST00000586863 ROCK2O75116 1388 aaKnown RBP20.13■□□□□ 0.81
ATG4D-206ENST00000586863 LARP1Q6PKG0 1096 aaKnown RBP20.13■□□□□ 0.81
ATG4D-206ENST00000586863 NLRP13Q86W25 1043 aa20.13■□□□□ 0.81
ATG4D-206ENST00000586863 GCP02774 474 aa20.12■□□□□ 0.81
ATG4D-206ENST00000586863 EVA1CP58658 441 aa20.12■□□□□ 0.81
ATG4D-206ENST00000586863 EN1Q05925 392 aaPredicted RBP20.12■□□□□ 0.81
ATG4D-206ENST00000586863 SLIT3O75094 1523 aa20.12■□□□□ 0.81
ATG4D-206ENST00000586863 COL5A2P05997 1499 aaPredicted RBP20.11■□□□□ 0.81
ATG4D-206ENST00000586863 DISP2A7MBM2 1401 aa20.11■□□□□ 0.81
ATG4D-206ENST00000586863 EVC2Q86UK5 1308 aa20.11■□□□□ 0.81
ATG4D-206ENST00000586863 AKAP12Q02952 1782 aa20.11■□□□□ 0.81
ATG4D-206ENST00000586863 BARGINQ6ZT62 677 aa20.1■□□□□ 0.81
ATG4D-206ENST00000586863 LRP5O75197 1615 aa20.09■□□□□ 0.81
ATG4D-206ENST00000586863 PSDA5PKW4 1024 aaPredicted RBP20.09■□□□□ 0.81
ATG4D-206ENST00000586863 NLRP6P59044 892 aa20.08■□□□□ 0.81
ATG4D-206ENST00000586863 TCP11L2Q8N4U5 519 aa20.08■□□□□ 0.81
ATG4D-206ENST00000586863 PARP4Q9UKK3 1724 aaKnown RBP20.07■□□□□ 0.8
ATG4D-206ENST00000586863 TRIM37O94972 964 aa20.07■□□□□ 0.8
ATG4D-206ENST00000586863 FAM196AQ6ZSG2 479 aa20.07■□□□□ 0.8
ATG4D-206ENST00000586863 COL18A1P39060 1754 aa20.07■□□□□ 0.8
ATG4D-206ENST00000586863 ZBTB7CA1YPR0 619 aa20.06■□□□□ 0.8
ATG4D-206ENST00000586863 CRB1P82279 1406 aa20.04■□□□□ 0.8
ATG4D-206ENST00000586863 PDE3BQ13370 1112 aa20.04■□□□□ 0.8
ATG4D-206ENST00000586863 EZH2Q15910 746 aaKnown RBP20.04■□□□□ 0.8
ATG4D-206ENST00000586863 AATKQ6ZMQ8 1374 aa20.04■□□□□ 0.8
ATG4D-206ENST00000586863 THRAP3Q9Y2W1 955 aaKnown RBP20.03■□□□□ 0.8
ATG4D-206ENST00000586863 RGPD5Q99666 1765 aa20.03■□□□□ 0.8
ATG4D-206ENST00000586863 TTC21BQ7Z4L5 1316 aa20.02■□□□□ 0.8
ATG4D-206ENST00000586863 MON2Q7Z3U7 1717 aa20.02■□□□□ 0.8
ATG4D-206ENST00000586863 WNK3Q9BYP7 1800 aa20.02■□□□□ 0.8
ATG4D-206ENST00000586863 CAMKK2Q96RR4 588 aa20.02■□□□□ 0.8
ATG4D-206ENST00000586863 RREB1Q92766 1687 aa20.02■□□□□ 0.8
ATG4D-206ENST00000586863 LRRC37A3O60309 1634 aa20.02■□□□□ 0.79
ATG4D-206ENST00000586863 CPSF1Q10570 1443 aaKnown RBP20.02■□□□□ 0.79
ATG4D-206ENST00000586863 SBNO2Q9Y2G9 1366 aa20■□□□□ 0.79
ATG4D-206ENST00000586863 PEAK1Q9H792 1746 aa20■□□□□ 0.79
ATG4D-206ENST00000586863 R3HDM1Q15032 1099 aaKnown RBP20■□□□□ 0.79
ATG4D-206ENST00000586863 NUP188Q5SRE5 1749 aa19.99■□□□□ 0.79
ATG4D-206ENST00000586863 NFAT5O94916 1531 aa19.99■□□□□ 0.79
ATG4D-206ENST00000586863 APBA3O96018 575 aa19.99■□□□□ 0.79
ATG4D-206ENST00000586863 ZNF692Q9BU19 519 aaPredicted RBP19.99■□□□□ 0.79
ATG4D-206ENST00000586863 AXIN2Q9Y2T1 843 aa19.99■□□□□ 0.79
ATG4D-206ENST00000586863 PARD3Q8TEW0 1356 aa19.98■□□□□ 0.79
ATG4D-206ENST00000586863 TTC21AQ8NDW8 1320 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms