RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 MAN1A2O60476 641 aa10.09□□□□□ -0.79
ZNF540-204ENST00000586792 FAM174AQ8TBP5 190 aa10.09□□□□□ -0.79
ZNF540-204ENST00000586792 PCDHGC3Q9UN70 934 aa10.09□□□□□ -0.79
ZNF540-204ENST00000586792 DESI1Q6ICB0 168 aa10.08□□□□□ -0.8
ZNF540-204ENST00000586792 SPDYE5A6NIY4 337 aa10.07□□□□□ -0.8
ZNF540-204ENST00000586792 SOBPA7XYQ1 873 aa10.07□□□□□ -0.8
ZNF540-204ENST00000586792 CCDC102AQ96A19 550 aa10.07□□□□□ -0.8
ZNF540-204ENST00000586792 KCTD17Q8N5Z5 321 aa10.06□□□□□ -0.8
ZNF540-204ENST00000586792 KLF16Q9BXK1 252 aaPredicted RBP10.06□□□□□ -0.8
ZNF540-204ENST00000586792 UPP2O95045 317 aa10.05□□□□□ -0.8
ZNF540-204ENST00000586792 TMEM151AQ8N4L1 468 aa10.05□□□□□ -0.8
ZNF540-204ENST00000586792 PRR7Q8TB68 274 aa10.05□□□□□ -0.8
ZNF540-204ENST00000586792 RNF225M0QZC1 329 aaPredicted RBP10.04□□□□□ -0.8
ZNF540-204ENST00000586792 PPFIA3O75145 1194 aa10.04□□□□□ -0.8
ZNF540-204ENST00000586792 CDK15Q96Q40 435 aa10.04□□□□□ -0.8
ZNF540-204ENST00000586792 ZIC2O95409 532 aaPredicted RBP10.03□□□□□ -0.8
ZNF540-204ENST00000586792 NR5A1Q13285 461 aa10.03□□□□□ -0.8
ZNF540-204ENST00000586792 MTMR2Q13614 643 aa10.03□□□□□ -0.8
ZNF540-204ENST00000586792 GDF11O95390 407 aa10.01□□□□□ -0.81
ZNF540-204ENST00000586792 CTHP32929 405 aa10.01□□□□□ -0.81
ZNF540-204ENST00000586792 C6orf118Q5T5N4 469 aa10.01□□□□□ -0.81
ZNF540-204ENST00000586792 SPIRE2Q8WWL2 714 aa10.01□□□□□ -0.81
ZNF540-204ENST00000586792 SSTR3P32745 418 aaPredicted RBP10□□□□□ -0.81
ZNF540-204ENST00000586792 GSK3AP49840 483 aa10□□□□□ -0.81
ZNF540-204ENST00000586792 ARID5BQ14865 1188 aa10□□□□□ -0.81
ZNF540-204ENST00000586792 SPTLC1O15269 473 aa9.99□□□□□ -0.81
ZNF540-204ENST00000586792 BMP2P12643 396 aa9.99□□□□□ -0.81
ZNF540-204ENST00000586792 NDUFV2P19404 249 aa9.99□□□□□ -0.81
ZNF540-204ENST00000586792 RASSF7Q02833 373 aa9.99□□□□□ -0.81
ZNF540-204ENST00000586792 ITPKCQ96DU7 683 aa9.99□□□□□ -0.81
ZNF540-204ENST00000586792 MOXD2PA6NHM9 499 aa9.98□□□□□ -0.81
ZNF540-204ENST00000586792 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
ZNF540-204ENST00000586792 LYPD8Q6UX82 237 aa9.97□□□□□ -0.81
ZNF540-204ENST00000586792 LINC00528Q8N1L1 170 aa9.96□□□□□ -0.82
ZNF540-204ENST00000586792 GJA5P36382 358 aa9.95□□□□□ -0.82
ZNF540-204ENST00000586792 PLCB2Q00722 1185 aa9.95□□□□□ -0.82
ZNF540-204ENST00000586792 AGERQ15109 404 aa9.95□□□□□ -0.82
ZNF540-204ENST00000586792 FOXJ1Q92949 421 aa9.95□□□□□ -0.82
ZNF540-204ENST00000586792 ADAMTS8Q9UP79 889 aa9.95□□□□□ -0.82
ZNF540-204ENST00000586792 SOS2Q07890 1332 aaPredicted RBP9.94□□□□□ -0.82
ZNF540-204ENST00000586792 BPHLQ86WA6 291 aaPredicted RBP9.94□□□□□ -0.82
ZNF540-204ENST00000586792 MEIOBQ8N635 442 aa9.94□□□□□ -0.82
ZNF540-204ENST00000586792 NR3C2P08235 984 aa9.93□□□□□ -0.82
ZNF540-204ENST00000586792 DIXDC1Q155Q3 683 aa9.93□□□□□ -0.82
ZNF540-204ENST00000586792 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.93□□□□□ -0.82
ZNF540-204ENST00000586792 GRM5P41594 1212 aa9.92□□□□□ -0.82
ZNF540-204ENST00000586792 CNTNAP3BQ96NU0 1288 aa9.92□□□□□ -0.82
ZNF540-204ENST00000586792 TSEN34Q9BSV6 310 aaKnown RBP9.92□□□□□ -0.82
ZNF540-204ENST00000586792 CNTNAP3Q9BZ76 1288 aa9.92□□□□□ -0.82
ZNF540-204ENST00000586792 DNMT3LQ9UJW3 386 aa9.91□□□□□ -0.82
ZNF540-204ENST00000586792 F12P00748 615 aaPredicted RBP9.89□□□□□ -0.83
ZNF540-204ENST00000586792 IGHA1P01876 353 aa9.89□□□□□ -0.83
ZNF540-204ENST00000586792 KRT76Q01546 638 aa9.89□□□□□ -0.83
ZNF540-204ENST00000586792 TTLL12Q14166 644 aaPredicted RBP9.89□□□□□ -0.83
ZNF540-204ENST00000586792 GPR161Q8N6U8 529 aaKnown RBP9.88□□□□□ -0.83
ZNF540-204ENST00000586792 ARMC2Q8NEN0 867 aa9.88□□□□□ -0.83
ZNF540-204ENST00000586792 NANOS1Q8WY41 292 aaKnown RBP9.88□□□□□ -0.83
ZNF540-204ENST00000586792 MAP10Q9P2G4 905 aa9.88□□□□□ -0.83
ZNF540-204ENST00000586792 EMILIN1Q9Y6C2 1016 aa9.88□□□□□ -0.83
ZNF540-204ENST00000586792 TTLL8A6PVC2 850 aa9.87□□□□□ -0.83
ZNF540-204ENST00000586792 COL25A1Q9BXS0 654 aaPredicted RBP9.87□□□□□ -0.83
ZNF540-204ENST00000586792 PTSQ03393 145 aa9.86□□□□□ -0.83
ZNF540-204ENST00000586792 C4orf48Q5BLP8 95 aa9.86□□□□□ -0.83
ZNF540-204ENST00000586792 RSBN1LQ6PCB5 846 aaPredicted RBP9.86□□□□□ -0.83
ZNF540-204ENST00000586792 SVOPQ8N4V2 548 aa9.86□□□□□ -0.83
ZNF540-204ENST00000586792 ZBTB3Q9H5J0 574 aa9.86□□□□□ -0.83
ZNF540-204ENST00000586792 MAP4K5Q9Y4K4 846 aa9.86□□□□□ -0.83
ZNF540-204ENST00000586792 DNMT3AQ9Y6K1 912 aaPredicted RBP9.86□□□□□ -0.83
ZNF540-204ENST00000586792 FOXK2Q01167 660 aa9.85□□□□□ -0.83
ZNF540-204ENST00000586792 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
ZNF540-204ENST00000586792 CFAP99D6REC4 459 aa9.84□□□□□ -0.83
ZNF540-204ENST00000586792 FSHRP23945 695 aa9.84□□□□□ -0.83
ZNF540-204ENST00000586792 PRPF38BQ5VTL8 546 aaKnown RBP9.84□□□□□ -0.83
ZNF540-204ENST00000586792 ZNF385CQ66K41 422 aaPredicted RBP9.84□□□□□ -0.83
ZNF540-204ENST00000586792 KANK3Q6NY19 840 aa9.84□□□□□ -0.83
ZNF540-204ENST00000586792 VASH1Q7L8A9 365 aaPredicted RBP9.84□□□□□ -0.83
ZNF540-204ENST00000586792 CCDC180Q9P1Z9 1646 aa9.84□□□□□ -0.83
ZNF540-204ENST00000586792 HRCP23327 699 aa9.83□□□□□ -0.84
ZNF540-204ENST00000586792 CCDC116Q8IYX3 515 aa9.83□□□□□ -0.84
ZNF540-204ENST00000586792 TBC1D2Q9BYX2 928 aa9.83□□□□□ -0.84
ZNF540-204ENST00000586792 MARSP56192 900 aaKnown RBP9.82□□□□□ -0.84
ZNF540-204ENST00000586792 AMHR2Q16671 573 aa9.82□□□□□ -0.84
ZNF540-204ENST00000586792 NBPF14Q5TI25 921 aa9.82□□□□□ -0.84
ZNF540-204ENST00000586792 GPAT2Q6NUI2 795 aa9.82□□□□□ -0.84
ZNF540-204ENST00000586792 GIGYF2Q6Y7W6 1299 aaKnown RBP9.82□□□□□ -0.84
ZNF540-204ENST00000586792 C1QTNF2Q9BXJ5 285 aa9.82□□□□□ -0.84
ZNF540-204ENST00000586792 SLURP2P0DP57 97 aa9.81□□□□□ -0.84
ZNF540-204ENST00000586792 IRS1P35568 1242 aa9.81□□□□□ -0.84
ZNF540-204ENST00000586792 TRMT44Q8IYL2 757 aaKnown RBP9.81□□□□□ -0.84
ZNF540-204ENST00000586792 CCDC155Q8N6L0 562 aa9.81□□□□□ -0.84
ZNF540-204ENST00000586792 SCARF2Q96GP6 870 aaPredicted RBP9.81□□□□□ -0.84
ZNF540-204ENST00000586792 PCDHB15Q9Y5E8 787 aa9.81□□□□□ -0.84
ZNF540-204ENST00000586792 SH3RF1Q7Z6J0 888 aa9.8□□□□□ -0.84
ZNF540-204ENST00000586792 FIGNL2A6NMB9 653 aa9.79□□□□□ -0.84
ZNF540-204ENST00000586792 HAP1P54257 671 aaPredicted RBP9.79□□□□□ -0.84
ZNF540-204ENST00000586792 PGPEP1Q9NXJ5 209 aa9.79□□□□□ -0.84
ZNF540-204ENST00000586792 ARHGEF15O94989 841 aa9.78□□□□□ -0.84
ZNF540-204ENST00000586792 SV2AQ7L0J3 742 aa9.78□□□□□ -0.84
ZNF540-204ENST00000586792 SLC35F4A4IF30 521 aa9.77□□□□□ -0.85
ZNF540-204ENST00000586792 SPINT1O43278 529 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms