RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 ALS2Q96Q42 1657 aa23.33■■□□□ 1.33
PRKCSH-203ENST00000586486 PER1O15534 1290 aaPredicted RBP23.33■■□□□ 1.32
PRKCSH-203ENST00000586486 SBNO1A3KN83 1393 aa23.33■■□□□ 1.32
PRKCSH-203ENST00000586486 COL16A1Q07092 1604 aaPredicted RBP23.32■■□□□ 1.32
PRKCSH-203ENST00000586486 KRT28Q7Z3Y7 464 aa23.32■■□□□ 1.32
PRKCSH-203ENST00000586486 DDX17Q92841 729 aaKnown RBP23.32■■□□□ 1.32
PRKCSH-203ENST00000586486 SCAF1Q9H7N4 1312 aaKnown RBP23.31■■□□□ 1.32
PRKCSH-203ENST00000586486 PIK3C2AO00443 1686 aa23.31■■□□□ 1.32
PRKCSH-203ENST00000586486 TTC21BQ7Z4L5 1316 aa23.31■■□□□ 1.32
PRKCSH-203ENST00000586486 TTC21AQ8NDW8 1320 aa23.31■■□□□ 1.32
PRKCSH-203ENST00000586486 USP54Q70EL1 1684 aa23.3■■□□□ 1.32
PRKCSH-203ENST00000586486 TNS3Q68CZ2 1445 aa23.29■■□□□ 1.32
PRKCSH-203ENST00000586486 XPCQ01831 940 aaPredicted RBP23.29■■□□□ 1.32
PRKCSH-203ENST00000586486 KNSTRNQ9Y448 316 aa23.29■■□□□ 1.32
PRKCSH-203ENST00000586486 ANKRD26Q9UPS8 1709 aa23.28■■□□□ 1.32
PRKCSH-203ENST00000586486 CGNL1Q0VF96 1302 aa23.28■■□□□ 1.32
PRKCSH-203ENST00000586486 NPC1L1Q9UHC9 1359 aa23.27■■□□□ 1.32
PRKCSH-203ENST00000586486 NSD2O96028 1365 aa23.26■■□□□ 1.31
PRKCSH-203ENST00000586486 SPATA31A3Q5VYP0 1347 aa23.25■■□□□ 1.31
PRKCSH-203ENST00000586486 MARF1Q9Y4F3 1742 aaKnown RBP23.25■■□□□ 1.31
PRKCSH-203ENST00000586486 AMER1Q5JTC6 1135 aaPredicted RBP23.25■■□□□ 1.31
PRKCSH-203ENST00000586486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.25■■□□□ 1.31
PRKCSH-203ENST00000586486 ARHGEF10O15013 1369 aa23.24■■□□□ 1.31
PRKCSH-203ENST00000586486 MED1Q15648 1581 aaPredicted RBP23.23■■□□□ 1.31
PRKCSH-203ENST00000586486 PAK3O75914 559 aaPredicted RBP23.23■■□□□ 1.31
PRKCSH-203ENST00000586486 USP31Q70CQ4 1352 aa23.23■■□□□ 1.31
PRKCSH-203ENST00000586486 OVOS2A0A0J9YW53 1432 aa23.22■■□□□ 1.31
PRKCSH-203ENST00000586486 OVOS2Q6IE36 1432 aa23.22■■□□□ 1.31
PRKCSH-203ENST00000586486 FYB1O15117 783 aa23.22■■□□□ 1.31
PRKCSH-203ENST00000586486 COL22A1Q8NFW1 1626 aaPredicted RBP23.22■■□□□ 1.31
PRKCSH-203ENST00000586486 NME9Q86XW9 330 aa23.21■■□□□ 1.31
PRKCSH-203ENST00000586486 LRRC59Q96AG4 307 aaKnown RBP23.21■■□□□ 1.31
PRKCSH-203ENST00000586486 CRYBG1Q9Y4K1 1723 aa23.21■■□□□ 1.31
PRKCSH-203ENST00000586486 SHPRHQ149N8 1683 aa23.2■■□□□ 1.3
PRKCSH-203ENST00000586486 ABTB2Q8N961 1025 aa23.19■■□□□ 1.3
PRKCSH-203ENST00000586486 FBXO41Q8TF61 875 aa23.19■■□□□ 1.3
PRKCSH-203ENST00000586486 ABCA3Q99758 1704 aa23.17■■□□□ 1.3
PRKCSH-203ENST00000586486 SLIT3O75094 1523 aa23.17■■□□□ 1.3
PRKCSH-203ENST00000586486 PHRF1Q9P1Y6 1649 aaKnown RBP23.17■■□□□ 1.3
PRKCSH-203ENST00000586486 USP19O94966 1318 aa23.16■■□□□ 1.3
PRKCSH-203ENST00000586486 GGNBP2Q9H3C7 697 aa23.16■■□□□ 1.3
PRKCSH-203ENST00000586486 PNPLA6Q8IY17 1366 aa23.16■■□□□ 1.3
PRKCSH-203ENST00000586486 NLRP13Q86W25 1043 aa23.15■■□□□ 1.3
PRKCSH-203ENST00000586486 HSPA1LP34931 641 aa23.15■■□□□ 1.3
PRKCSH-203ENST00000586486 NLRP6P59044 892 aa23.15■■□□□ 1.3
PRKCSH-203ENST00000586486 COG3Q96JB2 828 aa23.15■■□□□ 1.3
PRKCSH-203ENST00000586486 LMOD2Q6P5Q4 547 aa23.14■■□□□ 1.29
PRKCSH-203ENST00000586486 ZRANB1Q9UGI0 708 aa23.14■■□□□ 1.29
PRKCSH-203ENST00000586486 CC2D1BQ5T0F9 858 aaKnown RBP23.13■■□□□ 1.29
PRKCSH-203ENST00000586486 PARD3Q8TEW0 1356 aa23.13■■□□□ 1.29
PRKCSH-203ENST00000586486 JCADQ9P266 1359 aa23.12■■□□□ 1.29
PRKCSH-203ENST00000586486 NUTM2GQ5VZR2 741 aa23.11■■□□□ 1.29
PRKCSH-203ENST00000586486 NFAT5O94916 1531 aa23.11■■□□□ 1.29
PRKCSH-203ENST00000586486 DIEXFQ68CQ4 756 aaKnown RBP23.1■■□□□ 1.29
PRKCSH-203ENST00000586486 MORC1Q86VD1 984 aa23.09■■□□□ 1.29
PRKCSH-203ENST00000586486 AATKQ6ZMQ8 1374 aa23.08■■□□□ 1.28
PRKCSH-203ENST00000586486 KCNH5Q8NCM2 988 aa23.08■■□□□ 1.28
PRKCSH-203ENST00000586486 RALBP1Q15311 655 aa23.07■■□□□ 1.28
PRKCSH-203ENST00000586486 PRKRIP1Q9H875 184 aaPredicted RBP23.07■■□□□ 1.28
PRKCSH-203ENST00000586486 GCP02774 474 aa23.05■■□□□ 1.28
PRKCSH-203ENST00000586486 LTN1O94822 1766 aa23.04■■□□□ 1.28
PRKCSH-203ENST00000586486 ANP32CO43423 234 aa23.04■■□□□ 1.28
PRKCSH-203ENST00000586486 CABLES1Q8TDN4 633 aa23.04■■□□□ 1.28
PRKCSH-203ENST00000586486 MAP2P11137 1827 aaKnown RBP23.03■■□□□ 1.28
PRKCSH-203ENST00000586486 CNGB1Q14028 1251 aaPredicted RBP23.03■■□□□ 1.28
PRKCSH-203ENST00000586486 SPATA31A6Q5VVP1 1343 aa23.03■■□□□ 1.28
PRKCSH-203ENST00000586486 SMG6Q86US8 1419 aaKnown RBP23.03■■□□□ 1.28
PRKCSH-203ENST00000586486 CPDO75976 1380 aa23.02■■□□□ 1.28
PRKCSH-203ENST00000586486 ABCC6O95255 1503 aa23.01■■□□□ 1.27
PRKCSH-203ENST00000586486 KIF24Q5T7B8 1368 aa22.99■■□□□ 1.27
PRKCSH-203ENST00000586486 MYBBP1AQ9BQG0 1328 aaKnown RBP22.99■■□□□ 1.27
PRKCSH-203ENST00000586486 TNNT2P45379 298 aaPredicted RBP22.99■■□□□ 1.27
PRKCSH-203ENST00000586486 PLEKHG5O94827 1062 aa22.98■■□□□ 1.27
PRKCSH-203ENST00000586486 PEAK1Q9H792 1746 aa22.98■■□□□ 1.27
PRKCSH-203ENST00000586486 SOX12O15370 315 aa22.97■■□□□ 1.27
PRKCSH-203ENST00000586486 PPP2R1AP30153 589 aa22.97■■□□□ 1.27
PRKCSH-203ENST00000586486 HAP1P54257 671 aaPredicted RBP22.97■■□□□ 1.27
PRKCSH-203ENST00000586486 RTL1A6NKG5 1358 aa22.97■■□□□ 1.27
PRKCSH-203ENST00000586486 MAP3K19Q56UN5 1328 aa22.97■■□□□ 1.27
PRKCSH-203ENST00000586486 ARHGEF25Q86VW2 580 aa22.97■■□□□ 1.27
PRKCSH-203ENST00000586486 CDK12Q9NYV4 1490 aaPredicted RBP22.96■■□□□ 1.27
PRKCSH-203ENST00000586486 COL18A1P39060 1754 aa22.96■■□□□ 1.27
PRKCSH-203ENST00000586486 FBLN1P23142 703 aa22.96■■□□□ 1.27
PRKCSH-203ENST00000586486 POLKQ9UBT6 870 aa22.96■■□□□ 1.27
PRKCSH-203ENST00000586486 LRP6O75581 1613 aa22.96■■□□□ 1.27
PRKCSH-203ENST00000586486 KIAA0232Q92628 1395 aa22.95■■□□□ 1.27
PRKCSH-203ENST00000586486 RRS1Q15050 365 aaKnown RBP22.95■■□□□ 1.26
PRKCSH-203ENST00000586486 COL14A1Q05707 1796 aaKnown RBP22.95■■□□□ 1.26
PRKCSH-203ENST00000586486 LMO7Q8WWI1 1683 aa22.95■■□□□ 1.26
PRKCSH-203ENST00000586486 ZC3H6P61129 1189 aaKnown RBP22.93■■□□□ 1.26
PRKCSH-203ENST00000586486 EMILIN1Q9Y6C2 1016 aa22.93■■□□□ 1.26
PRKCSH-203ENST00000586486 FLT4P35916 1363 aa22.93■■□□□ 1.26
PRKCSH-203ENST00000586486 BLMP54132 1417 aaPredicted RBP22.91■■□□□ 1.26
PRKCSH-203ENST00000586486 PLCH1Q4KWH8 1693 aa22.9■■□□□ 1.26
PRKCSH-203ENST00000586486 INSRP06213 1382 aa22.9■■□□□ 1.26
PRKCSH-203ENST00000586486 NUTM2BA6NNL0 878 aaPredicted RBP22.9■■□□□ 1.26
PRKCSH-203ENST00000586486 NUTM2EB1AL46 878 aaPredicted RBP22.9■■□□□ 1.26
PRKCSH-203ENST00000586486 MTHFSP49914 203 aa22.9■■□□□ 1.26
PRKCSH-203ENST00000586486 NUTM2AQ8IVF1 878 aaPredicted RBP22.9■■□□□ 1.26
PRKCSH-203ENST00000586486 PRDM11Q9NQV5 511 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms