RNA–Protein interactions for RNA: ENST00000586127.6

GFAP-208, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-208ENST00000586127 ZBED9Q6R2W3 1325 aa23.28■■□□□ 1.32
GFAP-208ENST00000586127 PIK3C2AO00443 1686 aa23.28■■□□□ 1.32
GFAP-208ENST00000586127 TTC21BQ7Z4L5 1316 aa23.27■■□□□ 1.32
GFAP-208ENST00000586127 TMEM94Q12767 1356 aa23.26■■□□□ 1.31
GFAP-208ENST00000586127 ADAMTS8Q9UP79 889 aa23.26■■□□□ 1.31
GFAP-208ENST00000586127 INSRP06213 1382 aa23.26■■□□□ 1.31
GFAP-208ENST00000586127 MAP2P11137 1827 aaKnown RBP23.26■■□□□ 1.31
GFAP-208ENST00000586127 COL3A1P02461 1466 aaPredicted RBP23.25■■□□□ 1.31
GFAP-208ENST00000586127 MARF1Q9Y4F3 1742 aaKnown RBP23.25■■□□□ 1.31
GFAP-208ENST00000586127 NGDNQ8NEJ9 315 aaKnown RBP23.25■■□□□ 1.31
GFAP-208ENST00000586127 WDR43Q15061 677 aaKnown RBP eCLIP23.24■■□□□ 1.31
GFAP-208ENST00000586127 OVOS2A0A0J9YW53 1432 aa23.23■■□□□ 1.31
GFAP-208ENST00000586127 OVOS2Q6IE36 1432 aa23.23■■□□□ 1.31
GFAP-208ENST00000586127 FBLN1P23142 703 aa23.22■■□□□ 1.31
GFAP-208ENST00000586127 PHF8Q9UPP1 1060 aa23.21■■□□□ 1.31
GFAP-208ENST00000586127 USP54Q70EL1 1684 aa23.2■■□□□ 1.3
GFAP-208ENST00000586127 ZNF335Q9H4Z2 1342 aaPredicted RBP23.2■■□□□ 1.3
GFAP-208ENST00000586127 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
GFAP-208ENST00000586127 COG3Q96JB2 828 aa23.19■■□□□ 1.3
GFAP-208ENST00000586127 NCOA3Q9Y6Q9 1424 aa23.19■■□□□ 1.3
GFAP-208ENST00000586127 C19orf44Q9H6X5 657 aa23.19■■□□□ 1.3
GFAP-208ENST00000586127 LRRC7Q96NW7 1537 aa23.18■■□□□ 1.3
GFAP-208ENST00000586127 SMG6Q86US8 1419 aaKnown RBP23.18■■□□□ 1.3
GFAP-208ENST00000586127 TTC21AQ8NDW8 1320 aa23.18■■□□□ 1.3
GFAP-208ENST00000586127 KIF1AQ12756 1690 aa23.18■■□□□ 1.3
GFAP-208ENST00000586127 C1orf167Q5SNV9 1468 aa23.18■■□□□ 1.3
GFAP-208ENST00000586127 DCCP43146 1447 aa23.18■■□□□ 1.3
GFAP-208ENST00000586127 ESCO1Q5FWF5 840 aa23.17■■□□□ 1.3
GFAP-208ENST00000586127 CFAP53Q96M91 514 aa23.17■■□□□ 1.3
GFAP-208ENST00000586127 MST1RQ04912 1400 aa23.17■■□□□ 1.3
GFAP-208ENST00000586127 AATKQ6ZMQ8 1374 aa23.16■■□□□ 1.3
GFAP-208ENST00000586127 ORAI2Q96SN7 254 aa23.16■■□□□ 1.3
GFAP-208ENST00000586127 POLKQ9UBT6 870 aa23.16■■□□□ 1.3
GFAP-208ENST00000586127 PNPLA6Q8IY17 1366 aa23.15■■□□□ 1.3
GFAP-208ENST00000586127 PEAK1Q9H792 1746 aa23.15■■□□□ 1.3
GFAP-208ENST00000586127 TRPM3Q9HCF6 1732 aaPredicted RBP23.14■■□□□ 1.29
GFAP-208ENST00000586127 CDK12Q9NYV4 1490 aaPredicted RBP23.13■■□□□ 1.29
GFAP-208ENST00000586127 CCDC146Q8IYE0 955 aa23.13■■□□□ 1.29
GFAP-208ENST00000586127 EMILIN1Q9Y6C2 1016 aa23.13■■□□□ 1.29
GFAP-208ENST00000586127 USP31Q70CQ4 1352 aa23.12■■□□□ 1.29
GFAP-208ENST00000586127 SALL2Q9Y467 1007 aaPredicted RBP23.12■■□□□ 1.29
GFAP-208ENST00000586127 ATF3P18847 181 aa23.1■■□□□ 1.29
GFAP-208ENST00000586127 RRS1Q15050 365 aaKnown RBP23.1■■□□□ 1.29
GFAP-208ENST00000586127 MSH6P52701 1360 aa23.09■■□□□ 1.29
GFAP-208ENST00000586127 PPM1GO15355 546 aaPredicted RBP23.09■■□□□ 1.29
GFAP-208ENST00000586127 GTF3C3Q9Y5Q9 886 aa23.09■■□□□ 1.29
GFAP-208ENST00000586127 IQSEC2Q5JU85 1478 aa23.08■■□□□ 1.29
GFAP-208ENST00000586127 PAK3O75914 559 aaPredicted RBP23.07■■□□□ 1.28
GFAP-208ENST00000586127 FOXO3O43524 673 aa23.06■■□□□ 1.28
GFAP-208ENST00000586127 NUTM2GQ5VZR2 741 aa23.06■■□□□ 1.28
GFAP-208ENST00000586127 XPCQ01831 940 aaPredicted RBP23.06■■□□□ 1.28
GFAP-208ENST00000586127 PSME1Q06323 249 aa23.06■■□□□ 1.28
GFAP-208ENST00000586127 SOX12O15370 315 aa23.05■■□□□ 1.28
GFAP-208ENST00000586127 DIAPH1O60610 1272 aaKnown RBP23.05■■□□□ 1.28
GFAP-208ENST00000586127 CADPS2Q86UW7 1296 aa23.05■■□□□ 1.28
GFAP-208ENST00000586127 U2AF1L5P0DN76 240 aaPredicted RBP23.04■■□□□ 1.28
GFAP-208ENST00000586127 U2AF1Q01081 240 aaKnown RBP eCLIP23.04■■□□□ 1.28
GFAP-208ENST00000586127 ABTB2Q8N961 1025 aa23.04■■□□□ 1.28
GFAP-208ENST00000586127 ALS2Q96Q42 1657 aa23.04■■□□□ 1.28
GFAP-208ENST00000586127 NLRP6P59044 892 aa23.03■■□□□ 1.28
GFAP-208ENST00000586127 DMRT2Q9Y5R5 561 aa23.03■■□□□ 1.28
GFAP-208ENST00000586127 APAF1O14727 1248 aa23.03■■□□□ 1.28
GFAP-208ENST00000586127 U2SURPO15042 1029 aaKnown RBP23.03■■□□□ 1.28
GFAP-208ENST00000586127 LTN1O94822 1766 aa23.02■■□□□ 1.28
GFAP-208ENST00000586127 NFAT5O94916 1531 aa23.01■■□□□ 1.27
GFAP-208ENST00000586127 RUNDC1Q96C34 613 aa23■■□□□ 1.27
GFAP-208ENST00000586127 NUDCQ9Y266 331 aa23■■□□□ 1.27
GFAP-208ENST00000586127 RGPD1P0DJD0 1748 aa22.99■■□□□ 1.27
GFAP-208ENST00000586127 MAP3K19Q56UN5 1328 aa22.99■■□□□ 1.27
GFAP-208ENST00000586127 IL13P35225 146 aa22.99■■□□□ 1.27
GFAP-208ENST00000586127 DDX17Q92841 729 aaKnown RBP22.99■■□□□ 1.27
GFAP-208ENST00000586127 ZNF521Q96K83 1311 aa22.98■■□□□ 1.27
GFAP-208ENST00000586127 KRT28Q7Z3Y7 464 aa22.97■■□□□ 1.27
GFAP-208ENST00000586127 CDCA7LQ96GN5 454 aa22.97■■□□□ 1.27
GFAP-208ENST00000586127 SLIT3O75094 1523 aa22.97■■□□□ 1.27
GFAP-208ENST00000586127 PXDNQ92626 1479 aa22.96■■□□□ 1.27
GFAP-208ENST00000586127 PLEKHF1Q96S99 279 aa22.96■■□□□ 1.27
GFAP-208ENST00000586127 SBNO1A3KN83 1393 aa22.95■■□□□ 1.27
GFAP-208ENST00000586127 LTBP4Q8N2S1 1624 aa22.95■■□□□ 1.26
GFAP-208ENST00000586127 HSP90AB2PQ58FF8 381 aa22.94■■□□□ 1.26
GFAP-208ENST00000586127 TCP11L2Q8N4U5 519 aa22.94■■□□□ 1.26
GFAP-208ENST00000586127 RRP7AQ9Y3A4 280 aaKnown RBP22.94■■□□□ 1.26
GFAP-208ENST00000586127 PDE3BQ13370 1112 aa22.93■■□□□ 1.26
GFAP-208ENST00000586127 PHRF1Q9P1Y6 1649 aaKnown RBP22.93■■□□□ 1.26
GFAP-208ENST00000586127 FLT4P35916 1363 aa22.93■■□□□ 1.26
GFAP-208ENST00000586127 EIF4A2Q14240 407 aaKnown RBP22.93■■□□□ 1.26
GFAP-208ENST00000586127 BRINP3Q76B58 766 aa22.93■■□□□ 1.26
GFAP-208ENST00000586127 MED1Q15648 1581 aaPredicted RBP22.92■■□□□ 1.26
GFAP-208ENST00000586127 RSPH6AQ9H0K4 717 aa22.92■■□□□ 1.26
GFAP-208ENST00000586127 CRYBG1Q9Y4K1 1723 aa22.92■■□□□ 1.26
GFAP-208ENST00000586127 HMOX1P09601 288 aa22.9■■□□□ 1.26
GFAP-208ENST00000586127 SUPT16HQ9Y5B9 1047 aaKnown RBP22.9■■□□□ 1.26
GFAP-208ENST00000586127 USP19O94966 1318 aa22.9■■□□□ 1.26
GFAP-208ENST00000586127 NPHP3Q7Z494 1330 aa22.9■■□□□ 1.26
GFAP-208ENST00000586127 SLAIN2Q9P270 581 aa22.9■■□□□ 1.26
GFAP-208ENST00000586127 NEUROD2Q15784 382 aa22.89■■□□□ 1.25
GFAP-208ENST00000586127 LMOD2Q6P5Q4 547 aa22.89■■□□□ 1.25
GFAP-208ENST00000586127 NHSL1Q5SYE7 1610 aa22.89■■□□□ 1.25
GFAP-208ENST00000586127 TNS3Q68CZ2 1445 aa22.88■■□□□ 1.25
GFAP-208ENST00000586127 FCHSD2O94868 740 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms