RNA–Protein interactions for RNA: ENST00000585486.1

SPC24-202, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-202ENST00000585486 NME9Q86XW9 330 aa18.26■□□□□ 0.51
SPC24-202ENST00000585486 ZRANB1Q9UGI0 708 aa18.26■□□□□ 0.51
SPC24-202ENST00000585486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.25■□□□□ 0.51
SPC24-202ENST00000585486 GGNBP2Q9H3C7 697 aa18.25■□□□□ 0.51
SPC24-202ENST00000585486 TTC21AQ8NDW8 1320 aa18.24■□□□□ 0.51
SPC24-202ENST00000585486 MYBBP1AQ9BQG0 1328 aaKnown RBP18.24■□□□□ 0.51
SPC24-202ENST00000585486 FOXO3O43524 673 aa18.24■□□□□ 0.51
SPC24-202ENST00000585486 USP31Q70CQ4 1352 aa18.24■□□□□ 0.51
SPC24-202ENST00000585486 OVOS2A0A0J9YW53 1432 aa18.23■□□□□ 0.51
SPC24-202ENST00000585486 OVOS2Q6IE36 1432 aa18.23■□□□□ 0.51
SPC24-202ENST00000585486 TRPM3Q9HCF6 1732 aaPredicted RBP18.23■□□□□ 0.51
SPC24-202ENST00000585486 ANKRD26Q9UPS8 1709 aa18.23■□□□□ 0.51
SPC24-202ENST00000585486 PPP2R1AP30153 589 aa18.23■□□□□ 0.51
SPC24-202ENST00000585486 CNGB1Q14028 1251 aaPredicted RBP18.23■□□□□ 0.51
SPC24-202ENST00000585486 KIF20BQ96Q89 1820 aa18.23■□□□□ 0.51
SPC24-202ENST00000585486 PXDNQ92626 1479 aa18.22■□□□□ 0.51
SPC24-202ENST00000585486 PIK3C2AO00443 1686 aa18.22■□□□□ 0.51
SPC24-202ENST00000585486 USP54Q70EL1 1684 aa18.22■□□□□ 0.51
SPC24-202ENST00000585486 IQSEC2Q5JU85 1478 aa18.21■□□□□ 0.51
SPC24-202ENST00000585486 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
SPC24-202ENST00000585486 MARF1Q9Y4F3 1742 aaKnown RBP18.2■□□□□ 0.5
SPC24-202ENST00000585486 KRT28Q7Z3Y7 464 aa18.2■□□□□ 0.5
SPC24-202ENST00000585486 MORC1Q86VD1 984 aa18.2■□□□□ 0.5
SPC24-202ENST00000585486 DDX17Q92841 729 aaKnown RBP18.2■□□□□ 0.5
SPC24-202ENST00000585486 PSME1Q06323 249 aa18.19■□□□□ 0.5
SPC24-202ENST00000585486 NLRP13Q86W25 1043 aa18.18■□□□□ 0.5
SPC24-202ENST00000585486 SOS2Q07890 1332 aaPredicted RBP18.18■□□□□ 0.5
SPC24-202ENST00000585486 SBNO1A3KN83 1393 aa18.17■□□□□ 0.5
SPC24-202ENST00000585486 XPCQ01831 940 aaPredicted RBP18.17■□□□□ 0.5
SPC24-202ENST00000585486 ALS2Q96Q42 1657 aa18.16■□□□□ 0.5
SPC24-202ENST00000585486 NPHP3Q7Z494 1330 aa18.16■□□□□ 0.5
SPC24-202ENST00000585486 NHSL1Q5SYE7 1610 aa18.16■□□□□ 0.5
SPC24-202ENST00000585486 AATKQ6ZMQ8 1374 aa18.16■□□□□ 0.5
SPC24-202ENST00000585486 FBLN1P23142 703 aa18.15■□□□□ 0.5
SPC24-202ENST00000585486 CERKQ8TCT0 537 aa18.15■□□□□ 0.5
SPC24-202ENST00000585486 COG3Q96JB2 828 aa18.14■□□□□ 0.49
SPC24-202ENST00000585486 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.49
SPC24-202ENST00000585486 POLKQ9UBT6 870 aa18.13■□□□□ 0.49
SPC24-202ENST00000585486 SPATA31A3Q5VYP0 1347 aa18.13■□□□□ 0.49
SPC24-202ENST00000585486 ROBO1Q9Y6N7 1651 aa18.12■□□□□ 0.49
SPC24-202ENST00000585486 TNNT2P45379 298 aaPredicted RBP18.12■□□□□ 0.49
SPC24-202ENST00000585486 ABTB2Q8N961 1025 aa18.12■□□□□ 0.49
SPC24-202ENST00000585486 PNISRQ8TF01 805 aaKnown RBP18.12■□□□□ 0.49
SPC24-202ENST00000585486 USP19O94966 1318 aa18.12■□□□□ 0.49
SPC24-202ENST00000585486 INSRP06213 1382 aa18.12■□□□□ 0.49
SPC24-202ENST00000585486 PNPLA6Q8IY17 1366 aa18.12■□□□□ 0.49
SPC24-202ENST00000585486 AHDC1Q5TGY3 1603 aaPredicted RBP18.12■□□□□ 0.49
SPC24-202ENST00000585486 NLRP6P59044 892 aa18.11■□□□□ 0.49
SPC24-202ENST00000585486 MRS2Q9HD23 443 aa18.11■□□□□ 0.49
SPC24-202ENST00000585486 SLIT3O75094 1523 aa18.11■□□□□ 0.49
SPC24-202ENST00000585486 COL3A1P02461 1466 aaPredicted RBP18.1■□□□□ 0.49
SPC24-202ENST00000585486 TNS3Q68CZ2 1445 aa18.1■□□□□ 0.49
SPC24-202ENST00000585486 PAK3O75914 559 aaPredicted RBP18.1■□□□□ 0.49
SPC24-202ENST00000585486 MTHFSP49914 203 aa18.1■□□□□ 0.49
SPC24-202ENST00000585486 MED1Q15648 1581 aaPredicted RBP18.09■□□□□ 0.49
SPC24-202ENST00000585486 NFAT5O94916 1531 aa18.09■□□□□ 0.49
SPC24-202ENST00000585486 NUTM2GQ5VZR2 741 aa18.09■□□□□ 0.49
SPC24-202ENST00000585486 TOM1O60784 492 aa18.08■□□□□ 0.48
SPC24-202ENST00000585486 EMILIN1Q9Y6C2 1016 aa18.07■□□□□ 0.48
SPC24-202ENST00000585486 CRYBG1Q9Y4K1 1723 aa18.06■□□□□ 0.48
SPC24-202ENST00000585486 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
SPC24-202ENST00000585486 UBAP1LF5GYI3 381 aa18.05■□□□□ 0.48
SPC24-202ENST00000585486 RRS1Q15050 365 aaKnown RBP18.05■□□□□ 0.48
SPC24-202ENST00000585486 MAP3K19Q56UN5 1328 aa18.04■□□□□ 0.48
SPC24-202ENST00000585486 CDK12Q9NYV4 1490 aaPredicted RBP18.04■□□□□ 0.48
SPC24-202ENST00000585486 ARHGEF10O15013 1369 aa18.04■□□□□ 0.48
SPC24-202ENST00000585486 SHPRHQ149N8 1683 aa18.03■□□□□ 0.48
SPC24-202ENST00000585486 MAP2P11137 1827 aaKnown RBP18.03■□□□□ 0.48
SPC24-202ENST00000585486 GCP02774 474 aa18.03■□□□□ 0.48
SPC24-202ENST00000585486 COL16A1Q07092 1604 aaPredicted RBP18.02■□□□□ 0.48
SPC24-202ENST00000585486 ARHGEF25Q86VW2 580 aa18.01■□□□□ 0.47
SPC24-202ENST00000585486 PHRF1Q9P1Y6 1649 aaKnown RBP18.01■□□□□ 0.47
SPC24-202ENST00000585486 KCNH5Q8NCM2 988 aa18■□□□□ 0.47
SPC24-202ENST00000585486 KIF24Q5T7B8 1368 aa18■□□□□ 0.47
SPC24-202ENST00000585486 PIP4K2BP78356 416 aa17.99■□□□□ 0.47
SPC24-202ENST00000585486 CABLES1Q8TDN4 633 aa17.99■□□□□ 0.47
SPC24-202ENST00000585486 IL13P35225 146 aa17.98■□□□□ 0.47
SPC24-202ENST00000585486 LMOD2Q6P5Q4 547 aa17.98■□□□□ 0.47
SPC24-202ENST00000585486 FAM9BQ8IZU0 186 aa17.98■□□□□ 0.47
SPC24-202ENST00000585486 LRRC59Q96AG4 307 aaKnown RBP17.98■□□□□ 0.47
SPC24-202ENST00000585486 ADAMTS8Q9UP79 889 aa17.98■□□□□ 0.47
SPC24-202ENST00000585486 COL22A1Q8NFW1 1626 aaPredicted RBP17.98■□□□□ 0.47
SPC24-202ENST00000585486 SOX12O15370 315 aa17.97■□□□□ 0.47
SPC24-202ENST00000585486 HSP90AB2PQ58FF8 381 aa17.97■□□□□ 0.47
SPC24-202ENST00000585486 RTL1A6NKG5 1358 aa17.96■□□□□ 0.47
SPC24-202ENST00000585486 CPDO75976 1380 aa17.96■□□□□ 0.47
SPC24-202ENST00000585486 FLT4P35916 1363 aa17.96■□□□□ 0.47
SPC24-202ENST00000585486 ABCA3Q99758 1704 aa17.96■□□□□ 0.47
SPC24-202ENST00000585486 HOXC9P31274 260 aa17.96■□□□□ 0.47
SPC24-202ENST00000585486 CFAP53Q96M91 514 aa17.96■□□□□ 0.47
SPC24-202ENST00000585486 PHLPP1O60346 1717 aa17.95■□□□□ 0.46
SPC24-202ENST00000585486 COL18A1P39060 1754 aa17.95■□□□□ 0.46
SPC24-202ENST00000585486 IP6K1Q92551 441 aa17.95■□□□□ 0.46
SPC24-202ENST00000585486 BLMP54132 1417 aaPredicted RBP17.95■□□□□ 0.46
SPC24-202ENST00000585486 DIAPH1O60610 1272 aaKnown RBP17.94■□□□□ 0.46
SPC24-202ENST00000585486 EIF4A2Q14240 407 aaKnown RBP17.94■□□□□ 0.46
SPC24-202ENST00000585486 PPM1GO15355 546 aaPredicted RBP17.93■□□□□ 0.46
SPC24-202ENST00000585486 LTN1O94822 1766 aa17.93■□□□□ 0.46
SPC24-202ENST00000585486 RGPD1P0DJD0 1748 aa17.92■□□□□ 0.46
SPC24-202ENST00000585486 AXIN2Q9Y2T1 843 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms