RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 BTG4Q9NY30 223 aa33.42■■■□□ 2.94
LSM7-203ENST00000585409 WASLO00401 505 aaPredicted RBP33.4■■■□□ 2.94
LSM7-203ENST00000585409 FAM98CQ17RN3 349 aaKnown RBP33.4■■■□□ 2.94
LSM7-203ENST00000585409 STAC3Q96MF2 364 aa33.39■■■□□ 2.94
LSM7-203ENST00000585409 ARHGEF28Q8N1W1 1705 aaKnown RBP33.39■■■□□ 2.94
LSM7-203ENST00000585409 ITSN1Q15811 1721 aa33.38■■■□□ 2.93
LSM7-203ENST00000585409 RGPD1P0DJD0 1748 aa33.36■■■□□ 2.93
LSM7-203ENST00000585409 THSD7AQ9UPZ6 1657 aa33.36■■■□□ 2.93
LSM7-203ENST00000585409 A0A0G2JS52 829 aa33.36■■■□□ 2.93
LSM7-203ENST00000585409 MYT1Q01538 1121 aa33.36■■■□□ 2.93
LSM7-203ENST00000585409 DCAF11Q8TEB1 546 aa33.36■■■□□ 2.93
LSM7-203ENST00000585409 KDM2AQ9Y2K7 1162 aa33.35■■■□□ 2.93
LSM7-203ENST00000585409 SPATA31A5Q5VU36 1347 aa33.34■■■□□ 2.93
LSM7-203ENST00000585409 SPATA31A7Q8IWB4 1347 aa33.34■■■□□ 2.93
LSM7-203ENST00000585409 BAG6P46379 1132 aa33.34■■■□□ 2.93
LSM7-203ENST00000585409 ATP7BP35670 1465 aa33.32■■■□□ 2.92
LSM7-203ENST00000585409 NGDNQ8NEJ9 315 aaKnown RBP33.31■■■□□ 2.92
LSM7-203ENST00000585409 PHRF1Q9P1Y6 1649 aaKnown RBP33.29■■■□□ 2.92
LSM7-203ENST00000585409 CLSPNQ9HAW4 1339 aa33.28■■■□□ 2.92
LSM7-203ENST00000585409 TNS1Q9HBL0 1735 aaKnown RBP33.28■■■□□ 2.92
LSM7-203ENST00000585409 NEUROD1Q13562 356 aa33.28■■■□□ 2.92
LSM7-203ENST00000585409 PAK3O75914 559 aaPredicted RBP33.27■■■□□ 2.92
LSM7-203ENST00000585409 SIN3AQ96ST3 1273 aa33.26■■■□□ 2.91
LSM7-203ENST00000585409 PRDM11Q9NQV5 511 aa33.26■■■□□ 2.91
LSM7-203ENST00000585409 TOPAZ1Q8N9V7 1692 aa33.25■■■□□ 2.91
LSM7-203ENST00000585409 DISP2A7MBM2 1401 aa33.25■■■□□ 2.91
LSM7-203ENST00000585409 PSDA5PKW4 1024 aaPredicted RBP33.23■■■□□ 2.91
LSM7-203ENST00000585409 FAM182BQ5T319 152 aa33.23■■■□□ 2.91
LSM7-203ENST00000585409 NUDT16Q96DE0 195 aaKnown RBP33.23■■■□□ 2.91
LSM7-203ENST00000585409 KIAA0232Q92628 1395 aa33.22■■■□□ 2.91
LSM7-203ENST00000585409 EN1Q05925 392 aaPredicted RBP33.21■■■□□ 2.91
LSM7-203ENST00000585409 SPATA31A1Q5TZJ5 1347 aa33.21■■■□□ 2.91
LSM7-203ENST00000585409 CCER1Q8TC90 406 aaPredicted RBP33.2■■■□□ 2.91
LSM7-203ENST00000585409 POLR3AO14802 1390 aaPredicted RBP33.19■■■□□ 2.9
LSM7-203ENST00000585409 KIAA1210Q9ULL0 1709 aa33.18■■■□□ 2.9
LSM7-203ENST00000585409 TONSLQ96HA7 1378 aa33.17■■■□□ 2.9
LSM7-203ENST00000585409 CHRNA2Q15822 529 aa33.15■■■□□ 2.9
LSM7-203ENST00000585409 CDK19Q9BWU1 502 aa33.15■■■□□ 2.9
LSM7-203ENST00000585409 NRKQ7Z2Y5 1582 aa33.13■■■□□ 2.89
LSM7-203ENST00000585409 L3MBTL2Q969R5 705 aa33.12■■■□□ 2.89
LSM7-203ENST00000585409 ZC3H6P61129 1189 aaKnown RBP33.11■■■□□ 2.89
LSM7-203ENST00000585409 STRN4Q9NRL3 753 aa33.11■■■□□ 2.89
LSM7-203ENST00000585409 ACEP12821 1306 aa33.1■■■□□ 2.89
LSM7-203ENST00000585409 NBPF8Q3BBV2 869 aa33.1■■■□□ 2.89
LSM7-203ENST00000585409 CCDC61Q9Y6R9 512 aa33.1■■■□□ 2.89
LSM7-203ENST00000585409 LMO7Q8WWI1 1683 aa33.1■■■□□ 2.89
LSM7-203ENST00000585409 PLEKHG3A1L390 1219 aa33.09■■■□□ 2.89
LSM7-203ENST00000585409 FAM196AQ6ZSG2 479 aa33.09■■■□□ 2.89
LSM7-203ENST00000585409 SSH2Q76I76 1423 aa33.09■■■□□ 2.89
LSM7-203ENST00000585409 EZH2Q15910 746 aaKnown RBP33.08■■■□□ 2.89
LSM7-203ENST00000585409 NUTM2GQ5VZR2 741 aa33.08■■■□□ 2.89
LSM7-203ENST00000585409 CAMTA1Q9Y6Y1 1673 aa33.07■■■□□ 2.89
LSM7-203ENST00000585409 R3HDM1Q15032 1099 aaKnown RBP33.07■■■□□ 2.88
LSM7-203ENST00000585409 CAMKK2Q96RR4 588 aa33.07■■■□□ 2.88
LSM7-203ENST00000585409 BARGINQ6ZT62 677 aa33.06■■■□□ 2.88
LSM7-203ENST00000585409 TRIM37O94972 964 aa33.05■■■□□ 2.88
LSM7-203ENST00000585409 CPDO75976 1380 aa33.05■■■□□ 2.88
LSM7-203ENST00000585409 RREB1Q92766 1687 aa33.04■■■□□ 2.88
LSM7-203ENST00000585409 USP19O94966 1318 aa33.03■■■□□ 2.88
LSM7-203ENST00000585409 TIMELESSQ9UNS1 1208 aa33.03■■■□□ 2.88
LSM7-203ENST00000585409 PARD3Q8TEW0 1356 aa33.03■■■□□ 2.88
LSM7-203ENST00000585409 ABTB2Q8N961 1025 aa33.01■■■□□ 2.87
LSM7-203ENST00000585409 USP35Q9P2H5 1018 aa33.01■■■□□ 2.87
LSM7-203ENST00000585409 EVA1CP58658 441 aa33■■■□□ 2.87
LSM7-203ENST00000585409 NUP188Q5SRE5 1749 aa32.98■■■□□ 2.87
LSM7-203ENST00000585409 LARP1Q6PKG0 1096 aaKnown RBP32.98■■■□□ 2.87
LSM7-203ENST00000585409 APBA3O96018 575 aa32.97■■■□□ 2.87
LSM7-203ENST00000585409 NBPF1Q3BBV0 1214 aa32.97■■■□□ 2.87
LSM7-203ENST00000585409 PARP4Q9UKK3 1724 aaKnown RBP32.97■■■□□ 2.87
LSM7-203ENST00000585409 TCP11L2Q8N4U5 519 aa32.96■■■□□ 2.87
LSM7-203ENST00000585409 PPIP5K1Q6PFW1 1433 aa32.95■■■□□ 2.87
LSM7-203ENST00000585409 PDE3BQ13370 1112 aa32.95■■■□□ 2.87
LSM7-203ENST00000585409 NLRP13Q86W25 1043 aa32.93■■■□□ 2.86
LSM7-203ENST00000585409 THRAP3Q9Y2W1 955 aaKnown RBP32.93■■■□□ 2.86
LSM7-203ENST00000585409 BRD4O60885 1362 aaPredicted RBP32.93■■■□□ 2.86
LSM7-203ENST00000585409 COL5A2P05997 1499 aaPredicted RBP32.93■■■□□ 2.86
LSM7-203ENST00000585409 QRICH2Q9H0J4 1663 aa32.92■■■□□ 2.86
LSM7-203ENST00000585409 GCP02774 474 aa32.92■■■□□ 2.86
LSM7-203ENST00000585409 CENPJQ9HC77 1338 aaPredicted RBP32.9■■■□□ 2.86
LSM7-203ENST00000585409 SRPK2P78362 688 aaKnown RBP32.89■■■□□ 2.86
LSM7-203ENST00000585409 CABP2Q9NPB3 220 aa32.87■■■□□ 2.85
LSM7-203ENST00000585409 PEAK1Q9H792 1746 aa32.87■■■□□ 2.85
LSM7-203ENST00000585409 SLIT3O75094 1523 aa32.86■■■□□ 2.85
LSM7-203ENST00000585409 USP6P35125 1406 aa32.85■■■□□ 2.85
LSM7-203ENST00000585409 CRB1P82279 1406 aa32.85■■■□□ 2.85
LSM7-203ENST00000585409 SBF2Q86WG5 1849 aa32.83■■■□□ 2.85
LSM7-203ENST00000585409 COL18A1P39060 1754 aa32.83■■■□□ 2.85
LSM7-203ENST00000585409 TRPM1Q7Z4N2 1603 aa32.82■■■□□ 2.84
LSM7-203ENST00000585409 RGPD3A6NKT7 1758 aaPredicted RBP32.82■■■□□ 2.84
LSM7-203ENST00000585409 RGPD4Q7Z3J3 1758 aa32.82■■■□□ 2.84
LSM7-203ENST00000585409 AATKQ6ZMQ8 1374 aa32.82■■■□□ 2.84
LSM7-203ENST00000585409 LRRC37A3O60309 1634 aa32.81■■■□□ 2.84
LSM7-203ENST00000585409 PIK3C2AO00443 1686 aa32.81■■■□□ 2.84
LSM7-203ENST00000585409 ROCK2O75116 1388 aaKnown RBP32.81■■■□□ 2.84
LSM7-203ENST00000585409 C11orf95C9JLR9 678 aaPredicted RBP32.8■■■□□ 2.84
LSM7-203ENST00000585409 WNK3Q9BYP7 1800 aa32.79■■■□□ 2.84
LSM7-203ENST00000585409 NBPF14Q5TI25 921 aa32.79■■■□□ 2.84
LSM7-203ENST00000585409 CABP1Q9NZU7 370 aa32.79■■■□□ 2.84
LSM7-203ENST00000585409 NLRP6P59044 892 aa32.78■■■□□ 2.84
LSM7-203ENST00000585409 OVOS2A0A0G2JMS6 1433 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms