RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 LMOD2Q6P5Q4 547 aa32.72■■■□□ 2.83
LSM7-202ENST00000585395 CDK19Q9BWU1 502 aa32.72■■■□□ 2.83
LSM7-202ENST00000585395 PRR36Q9H6K5 1346 aa32.71■■■□□ 2.83
LSM7-202ENST00000585395 GPRASP1Q5JY77 1395 aa32.7■■■□□ 2.83
LSM7-202ENST00000585395 NGDNQ8NEJ9 315 aaKnown RBP32.7■■■□□ 2.83
LSM7-202ENST00000585395 NUDT16Q96DE0 195 aaKnown RBP32.69■■■□□ 2.82
LSM7-202ENST00000585395 NWD2Q9ULI1 1742 aa32.68■■■□□ 2.82
LSM7-202ENST00000585395 HAP1P54257 671 aaPredicted RBP32.68■■■□□ 2.82
LSM7-202ENST00000585395 KRT27Q7Z3Y8 459 aa32.68■■■□□ 2.82
LSM7-202ENST00000585395 CARD11Q9BXL7 1154 aa32.68■■■□□ 2.82
LSM7-202ENST00000585395 TNS3Q68CZ2 1445 aa32.68■■■□□ 2.82
LSM7-202ENST00000585395 SRPK2P78362 688 aaKnown RBP32.67■■■□□ 2.82
LSM7-202ENST00000585395 ATP7BP35670 1465 aa32.66■■■□□ 2.82
LSM7-202ENST00000585395 PLEKHG5O94827 1062 aa32.65■■■□□ 2.82
LSM7-202ENST00000585395 PLCH1Q4KWH8 1693 aa32.64■■■□□ 2.82
LSM7-202ENST00000585395 CCDC9Q9Y3X0 531 aaKnown RBP32.64■■■□□ 2.82
LSM7-202ENST00000585395 SBNO1A3KN83 1393 aa32.63■■■□□ 2.81
LSM7-202ENST00000585395 BAG6P46379 1132 aa32.62■■■□□ 2.81
LSM7-202ENST00000585395 ARHGEF10O15013 1369 aa32.61■■■□□ 2.81
LSM7-202ENST00000585395 PAK3O75914 559 aaPredicted RBP32.59■■■□□ 2.81
LSM7-202ENST00000585395 CABLES1Q8TDN4 633 aa32.59■■■□□ 2.81
LSM7-202ENST00000585395 PSDA5PKW4 1024 aaPredicted RBP32.58■■■□□ 2.81
LSM7-202ENST00000585395 CCDC61Q9Y6R9 512 aa32.58■■■□□ 2.81
LSM7-202ENST00000585395 TOPAZ1Q8N9V7 1692 aa32.56■■■□□ 2.8
LSM7-202ENST00000585395 EVC2Q86UK5 1308 aa32.56■■■□□ 2.8
LSM7-202ENST00000585395 CABP2Q9NPB3 220 aa32.56■■■□□ 2.8
LSM7-202ENST00000585395 ABCA3Q99758 1704 aa32.54■■■□□ 2.8
LSM7-202ENST00000585395 TRPM3Q9HCF6 1732 aaPredicted RBP32.54■■■□□ 2.8
LSM7-202ENST00000585395 A0A0G2JS52 829 aa32.53■■■□□ 2.8
LSM7-202ENST00000585395 MYT1Q01538 1121 aa32.53■■■□□ 2.8
LSM7-202ENST00000585395 FAM83GA6ND36 823 aa32.51■■■□□ 2.79
LSM7-202ENST00000585395 PPIP5K1Q6PFW1 1433 aa32.51■■■□□ 2.79
LSM7-202ENST00000585395 ACEP12821 1306 aa32.51■■■□□ 2.79
LSM7-202ENST00000585395 ALS2Q96Q42 1657 aa32.48■■■□□ 2.79
LSM7-202ENST00000585395 SLC24A1O60721 1099 aa32.48■■■□□ 2.79
LSM7-202ENST00000585395 RGPD1P0DJD0 1748 aa32.47■■■□□ 2.79
LSM7-202ENST00000585395 FAM98CQ17RN3 349 aaKnown RBP32.47■■■□□ 2.79
LSM7-202ENST00000585395 PLEKHG3A1L390 1219 aa32.46■■■□□ 2.79
LSM7-202ENST00000585395 NRAPQ86VF7 1730 aa32.46■■■□□ 2.79
LSM7-202ENST00000585395 POLR3AO14802 1390 aaPredicted RBP32.45■■■□□ 2.79
LSM7-202ENST00000585395 EN1Q05925 392 aaPredicted RBP32.44■■■□□ 2.78
LSM7-202ENST00000585395 SBNO2Q9Y2G9 1366 aa32.43■■■□□ 2.78
LSM7-202ENST00000585395 BTG4Q9NY30 223 aa32.42■■■□□ 2.78
LSM7-202ENST00000585395 USP47Q96K76 1375 aa32.42■■■□□ 2.78
LSM7-202ENST00000585395 DISP2A7MBM2 1401 aa32.42■■■□□ 2.78
LSM7-202ENST00000585395 CABP1Q9NZU7 370 aa32.4■■■□□ 2.78
LSM7-202ENST00000585395 R3HDM1Q15032 1099 aaKnown RBP32.39■■■□□ 2.78
LSM7-202ENST00000585395 COL14A1Q05707 1796 aaKnown RBP32.39■■■□□ 2.78
LSM7-202ENST00000585395 NUTM2GQ5VZR2 741 aa32.37■■■□□ 2.77
LSM7-202ENST00000585395 SPATA31A5Q5VU36 1347 aa32.35■■■□□ 2.77
LSM7-202ENST00000585395 SPATA31A7Q8IWB4 1347 aa32.35■■■□□ 2.77
LSM7-202ENST00000585395 ABTB2Q8N961 1025 aa32.35■■■□□ 2.77
LSM7-202ENST00000585395 ST20-MTHFSA0A0A6YYL1 179 aa32.34■■■□□ 2.77
LSM7-202ENST00000585395 TNS1Q9HBL0 1735 aaKnown RBP32.33■■■□□ 2.77
LSM7-202ENST00000585395 FAM182BQ5T319 152 aa32.32■■■□□ 2.76
LSM7-202ENST00000585395 THSD7AQ9UPZ6 1657 aa32.31■■■□□ 2.76
LSM7-202ENST00000585395 EIF4G2P78344 907 aaKnown RBP eCLIP32.31■■■□□ 2.76
LSM7-202ENST00000585395 CRYBG1Q9Y4K1 1723 aa32.3■■■□□ 2.76
LSM7-202ENST00000585395 BRD4O60885 1362 aaPredicted RBP32.3■■■□□ 2.76
LSM7-202ENST00000585395 USP6P35125 1406 aa32.29■■■□□ 2.76
LSM7-202ENST00000585395 PHRF1Q9P1Y6 1649 aaKnown RBP32.29■■■□□ 2.76
LSM7-202ENST00000585395 EZH2Q15910 746 aaKnown RBP32.28■■■□□ 2.76
LSM7-202ENST00000585395 PRDM11Q9NQV5 511 aa32.28■■■□□ 2.76
LSM7-202ENST00000585395 TMC1Q8TDI8 760 aa32.27■■■□□ 2.76
LSM7-202ENST00000585395 NLRP13Q86W25 1043 aa32.26■■■□□ 2.75
LSM7-202ENST00000585395 PARD3Q8TEW0 1356 aa32.25■■■□□ 2.75
LSM7-202ENST00000585395 ZEB1P37275 1124 aaPredicted RBP32.25■■■□□ 2.75
LSM7-202ENST00000585395 TMF1P82094 1093 aa32.25■■■□□ 2.75
LSM7-202ENST00000585395 CAMKK2Q96RR4 588 aa32.25■■■□□ 2.75
LSM7-202ENST00000585395 ZNF692Q9BU19 519 aaPredicted RBP32.25■■■□□ 2.75
LSM7-202ENST00000585395 AKAP12Q02952 1782 aa32.24■■■□□ 2.75
LSM7-202ENST00000585395 FAM196AQ6ZSG2 479 aa32.24■■■□□ 2.75
LSM7-202ENST00000585395 PUS7Q96PZ0 661 aaKnown RBP32.24■■■□□ 2.75
LSM7-202ENST00000585395 CDCA8Q53HL2 280 aa32.23■■■□□ 2.75
LSM7-202ENST00000585395 TESK2Q96S53 571 aa32.23■■■□□ 2.75
LSM7-202ENST00000585395 ZC3H6P61129 1189 aaKnown RBP32.22■■■□□ 2.75
LSM7-202ENST00000585395 KTN1Q86UP2 1357 aaKnown RBP32.2■■■□□ 2.75
LSM7-202ENST00000585395 NLRP6P59044 892 aa32.2■■■□□ 2.75
LSM7-202ENST00000585395 KIAA0232Q92628 1395 aa32.19■■■□□ 2.74
LSM7-202ENST00000585395 TRIM37O94972 964 aa32.19■■■□□ 2.74
LSM7-202ENST00000585395 SPATA31A1Q5TZJ5 1347 aa32.19■■■□□ 2.74
LSM7-202ENST00000585395 HDGFL2Q7Z4V5 671 aaPredicted RBP32.18■■■□□ 2.74
LSM7-202ENST00000585395 NRKQ7Z2Y5 1582 aa32.18■■■□□ 2.74
LSM7-202ENST00000585395 YY1P25490 414 aa32.17■■■□□ 2.74
LSM7-202ENST00000585395 CHRNA2Q15822 529 aa32.17■■■□□ 2.74
LSM7-202ENST00000585395 ZBTB7CA1YPR0 619 aa32.16■■■□□ 2.74
LSM7-202ENST00000585395 APBA3O96018 575 aa32.16■■■□□ 2.74
LSM7-202ENST00000585395 HSPA5P11021 654 aaKnown RBP32.16■■■□□ 2.74
LSM7-202ENST00000585395 USP19O94966 1318 aa32.16■■■□□ 2.74
LSM7-202ENST00000585395 TTC21BQ7Z4L5 1316 aa32.15■■■□□ 2.74
LSM7-202ENST00000585395 TTC21AQ8NDW8 1320 aa32.14■■■□□ 2.74
LSM7-202ENST00000585395 CPSF1Q10570 1443 aaKnown RBP32.14■■■□□ 2.74
LSM7-202ENST00000585395 MON2Q7Z3U7 1717 aa32.14■■■□□ 2.74
LSM7-202ENST00000585395 PIK3C2AO00443 1686 aa32.13■■■□□ 2.73
LSM7-202ENST00000585395 TERF2IPQ9NYB0 399 aa32.13■■■□□ 2.73
LSM7-202ENST00000585395 GCP02774 474 aa32.12■■■□□ 2.73
LSM7-202ENST00000585395 SLC12A5Q9H2X9 1139 aa32.11■■■□□ 2.73
LSM7-202ENST00000585395 STRN4Q9NRL3 753 aa32.11■■■□□ 2.73
LSM7-202ENST00000585395 SSH2Q76I76 1423 aa32.1■■■□□ 2.73
LSM7-202ENST00000585395 NINLQ9Y2I6 1382 aa32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms