RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 FOXO3O43524 673 aa18.67■□□□□ 0.58
CHAF1A-202ENST00000585371 MON2Q7Z3U7 1717 aa18.66■□□□□ 0.58
CHAF1A-202ENST00000585371 CD163L1Q9NR16 1453 aa18.66■□□□□ 0.58
CHAF1A-202ENST00000585371 CABP1Q9NZU7 370 aa18.65■□□□□ 0.58
CHAF1A-202ENST00000585371 ALS2Q96Q42 1657 aa18.64■□□□□ 0.57
CHAF1A-202ENST00000585371 USP21Q9UK80 565 aa18.64■□□□□ 0.57
CHAF1A-202ENST00000585371 ACEP12821 1306 aa18.64■□□□□ 0.57
CHAF1A-202ENST00000585371 CPSF1Q10570 1443 aaKnown RBP18.64■□□□□ 0.57
CHAF1A-202ENST00000585371 MARF1Q9Y4F3 1742 aaKnown RBP18.63■□□□□ 0.57
CHAF1A-202ENST00000585371 TRPC5Q9UL62 973 aaPredicted RBP18.63■□□□□ 0.57
CHAF1A-202ENST00000585371 NRKQ7Z2Y5 1582 aa18.63■□□□□ 0.57
CHAF1A-202ENST00000585371 XPCQ01831 940 aaPredicted RBP18.62■□□□□ 0.57
CHAF1A-202ENST00000585371 FNBP4Q8N3X1 1017 aaPredicted RBP18.62■□□□□ 0.57
CHAF1A-202ENST00000585371 SLC12A5Q9H2X9 1139 aa18.62■□□□□ 0.57
CHAF1A-202ENST00000585371 SSH2Q76I76 1423 aa18.61■□□□□ 0.57
CHAF1A-202ENST00000585371 KRT28Q7Z3Y7 464 aa18.61■□□□□ 0.57
CHAF1A-202ENST00000585371 NINLQ9Y2I6 1382 aa18.6■□□□□ 0.57
CHAF1A-202ENST00000585371 CDCA8Q53HL2 280 aa18.6■□□□□ 0.57
CHAF1A-202ENST00000585371 NGDNQ8NEJ9 315 aaKnown RBP18.6■□□□□ 0.57
CHAF1A-202ENST00000585371 USP6P35125 1406 aa18.59■□□□□ 0.57
CHAF1A-202ENST00000585371 SBNO1A3KN83 1393 aa18.59■□□□□ 0.57
CHAF1A-202ENST00000585371 ATRNO75882 1429 aa18.58■□□□□ 0.57
CHAF1A-202ENST00000585371 CRYBG1Q9Y4K1 1723 aa18.58■□□□□ 0.57
CHAF1A-202ENST00000585371 KIF7Q2M1P5 1343 aa18.58■□□□□ 0.57
CHAF1A-202ENST00000585371 SPATA31A3Q5VYP0 1347 aa18.57■□□□□ 0.56
CHAF1A-202ENST00000585371 PSME1Q06323 249 aa18.57■□□□□ 0.56
CHAF1A-202ENST00000585371 A0A1W2PP64 1363 aa18.56■□□□□ 0.56
CHAF1A-202ENST00000585371 TMC1Q8TDI8 760 aa18.56■□□□□ 0.56
CHAF1A-202ENST00000585371 TNS3Q68CZ2 1445 aa18.56■□□□□ 0.56
CHAF1A-202ENST00000585371 CCDC7Q96M83 1385 aa18.55■□□□□ 0.56
CHAF1A-202ENST00000585371 WASHC2AQ641Q2 1341 aa18.55■□□□□ 0.56
CHAF1A-202ENST00000585371 ABCA3Q99758 1704 aa18.55■□□□□ 0.56
CHAF1A-202ENST00000585371 PIK3C2AO00443 1686 aa18.55■□□□□ 0.56
CHAF1A-202ENST00000585371 BRD4O60885 1362 aaPredicted RBP18.55■□□□□ 0.56
CHAF1A-202ENST00000585371 ANKRD36BQ8N2N9 1353 aa18.55■□□□□ 0.56
CHAF1A-202ENST00000585371 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.54■□□□□ 0.56
CHAF1A-202ENST00000585371 ZNF692Q9BU19 519 aaPredicted RBP18.54■□□□□ 0.56
CHAF1A-202ENST00000585371 BCL9LQ86UU0 1499 aa18.53■□□□□ 0.56
CHAF1A-202ENST00000585371 USP54Q70EL1 1684 aa18.53■□□□□ 0.56
CHAF1A-202ENST00000585371 KTN1Q86UP2 1357 aaKnown RBP18.53■□□□□ 0.56
CHAF1A-202ENST00000585371 TTC21BQ7Z4L5 1316 aa18.5■□□□□ 0.55
CHAF1A-202ENST00000585371 EDC4Q6P2E9 1401 aaKnown RBP18.5■□□□□ 0.55
CHAF1A-202ENST00000585371 PHRF1Q9P1Y6 1649 aaKnown RBP18.5■□□□□ 0.55
CHAF1A-202ENST00000585371 CARD14Q9BXL6 1004 aa18.5■□□□□ 0.55
CHAF1A-202ENST00000585371 TERF2IPQ9NYB0 399 aa18.5■□□□□ 0.55
CHAF1A-202ENST00000585371 HDGFL2Q7Z4V5 671 aaPredicted RBP18.49■□□□□ 0.55
CHAF1A-202ENST00000585371 GJD4Q96KN9 370 aaPredicted RBP18.49■□□□□ 0.55
CHAF1A-202ENST00000585371 POLR3GLQ9BT43 218 aa18.49■□□□□ 0.55
CHAF1A-202ENST00000585371 KIF20BQ96Q89 1820 aa18.49■□□□□ 0.55
CHAF1A-202ENST00000585371 ARHGEF10O15013 1369 aa18.48■□□□□ 0.55
CHAF1A-202ENST00000585371 SLIT2O94813 1529 aa18.48■□□□□ 0.55
CHAF1A-202ENST00000585371 PAK3O75914 559 aaPredicted RBP18.47■□□□□ 0.55
CHAF1A-202ENST00000585371 TTC21AQ8NDW8 1320 aa18.47■□□□□ 0.55
CHAF1A-202ENST00000585371 CCDC125Q86Z20 511 aa18.46■□□□□ 0.55
CHAF1A-202ENST00000585371 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.55
CHAF1A-202ENST00000585371 SLIT3O75094 1523 aa18.44■□□□□ 0.54
CHAF1A-202ENST00000585371 NSD3Q9BZ95 1437 aa18.44■□□□□ 0.54
CHAF1A-202ENST00000585371 HAP1P54257 671 aaPredicted RBP18.44■□□□□ 0.54
CHAF1A-202ENST00000585371 PANK3Q9H999 370 aa18.44■□□□□ 0.54
CHAF1A-202ENST00000585371 USP19O94966 1318 aa18.44■□□□□ 0.54
CHAF1A-202ENST00000585371 USP31Q70CQ4 1352 aa18.43■□□□□ 0.54
CHAF1A-202ENST00000585371 NWD2Q9ULI1 1742 aa18.43■□□□□ 0.54
CHAF1A-202ENST00000585371 GLI3P10071 1580 aa18.43■□□□□ 0.54
CHAF1A-202ENST00000585371 NME9Q86XW9 330 aa18.43■□□□□ 0.54
CHAF1A-202ENST00000585371 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.43■□□□□ 0.54
CHAF1A-202ENST00000585371 ABTB2Q8N961 1025 aa18.43■□□□□ 0.54
CHAF1A-202ENST00000585371 ZRANB1Q9UGI0 708 aa18.43■□□□□ 0.54
CHAF1A-202ENST00000585371 ANKRD26Q9UPS8 1709 aa18.43■□□□□ 0.54
CHAF1A-202ENST00000585371 OVOS2A0A0J9YW53 1432 aa18.42■□□□□ 0.54
CHAF1A-202ENST00000585371 OVOS2Q6IE36 1432 aa18.42■□□□□ 0.54
CHAF1A-202ENST00000585371 NUTM2GQ5VZR2 741 aa18.42■□□□□ 0.54
CHAF1A-202ENST00000585371 LMOD2Q6P5Q4 547 aa18.42■□□□□ 0.54
CHAF1A-202ENST00000585371 CABLES1Q8TDN4 633 aa18.42■□□□□ 0.54
CHAF1A-202ENST00000585371 PLCH1Q4KWH8 1693 aa18.41■□□□□ 0.54
CHAF1A-202ENST00000585371 FYB1O15117 783 aa18.4■□□□□ 0.54
CHAF1A-202ENST00000585371 PER1O15534 1290 aaPredicted RBP18.4■□□□□ 0.54
CHAF1A-202ENST00000585371 NLRP13Q86W25 1043 aa18.39■□□□□ 0.53
CHAF1A-202ENST00000585371 NFAT5O94916 1531 aa18.39■□□□□ 0.53
CHAF1A-202ENST00000585371 BRWD3Q6RI45 1802 aa18.38■□□□□ 0.53
CHAF1A-202ENST00000585371 NLRP6P59044 892 aa18.38■□□□□ 0.53
CHAF1A-202ENST00000585371 VPS72Q15906 364 aa18.38■□□□□ 0.53
CHAF1A-202ENST00000585371 PLEKHG5O94827 1062 aa18.36■□□□□ 0.53
CHAF1A-202ENST00000585371 COL18A1P39060 1754 aa18.36■□□□□ 0.53
CHAF1A-202ENST00000585371 BLMP54132 1417 aaPredicted RBP18.36■□□□□ 0.53
CHAF1A-202ENST00000585371 ZNF316A6NFI3 1004 aaPredicted RBP18.35■□□□□ 0.53
CHAF1A-202ENST00000585371 LTN1O94822 1766 aa18.35■□□□□ 0.53
CHAF1A-202ENST00000585371 GCP02774 474 aa18.34■□□□□ 0.53
CHAF1A-202ENST00000585371 AMER1Q5JTC6 1135 aaPredicted RBP18.34■□□□□ 0.53
CHAF1A-202ENST00000585371 SEPT12Q8IYM1 358 aa18.34■□□□□ 0.53
CHAF1A-202ENST00000585371 GGNBP2Q9H3C7 697 aa18.34■□□□□ 0.53
CHAF1A-202ENST00000585371 CCDC9Q9Y3X0 531 aaKnown RBP18.34■□□□□ 0.53
CHAF1A-202ENST00000585371 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
CHAF1A-202ENST00000585371 EP400Q96L91 3159 aa18.33■□□□□ 0.53
CHAF1A-202ENST00000585371 COL14A1Q05707 1796 aaKnown RBP18.33■□□□□ 0.53
CHAF1A-202ENST00000585371 RGPD5Q99666 1765 aa18.33■□□□□ 0.53
CHAF1A-202ENST00000585371 ONECUT3O60422 494 aaPredicted RBP18.33■□□□□ 0.52
CHAF1A-202ENST00000585371 NRAPQ86VF7 1730 aa18.32■□□□□ 0.52
CHAF1A-202ENST00000585371 CPDO75976 1380 aa18.32■□□□□ 0.52
CHAF1A-202ENST00000585371 CGNL1Q0VF96 1302 aa18.32■□□□□ 0.52
CHAF1A-202ENST00000585371 MAP2P11137 1827 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms