RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 ZSCAN30Q86W11 494 aa8.73□□□□□ -1.01
CDH8-214ENST00000585315 K7ELQ4 463 aaPredicted RBP8.73□□□□□ -1.01
CDH8-214ENST00000585315 EIF2S2P20042 333 aaKnown RBP8.73□□□□□ -1.01
CDH8-214ENST00000585315 NAP1L1P55209 391 aaKnown RBP8.73□□□□□ -1.01
CDH8-214ENST00000585315 EPS15P42566 896 aa8.73□□□□□ -1.01
CDH8-214ENST00000585315 PNISRQ8TF01 805 aaKnown RBP8.73□□□□□ -1.01
CDH8-214ENST00000585315 CCT4P50991 539 aaKnown RBP8.72□□□□□ -1.01
CDH8-214ENST00000585315 ERLIN2O94905 339 aa8.72□□□□□ -1.01
CDH8-214ENST00000585315 TRIM34Q9BYJ4 488 aa8.72□□□□□ -1.01
CDH8-214ENST00000585315 PLEKHH2Q8IVE3 1493 aa8.72□□□□□ -1.01
CDH8-214ENST00000585315 GOLGA6L10A6NI86 522 aa8.72□□□□□ -1.01
CDH8-214ENST00000585315 MCM4P33991 863 aa8.72□□□□□ -1.01
CDH8-214ENST00000585315 PRPF40AO75400 957 aaKnown RBP8.72□□□□□ -1.01
CDH8-214ENST00000585315 TBC1D2BQ9UPU7 963 aa8.72□□□□□ -1.01
CDH8-214ENST00000585315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.72□□□□□ -1.01
CDH8-214ENST00000585315 CBFA2T2O43439 604 aa8.72□□□□□ -1.01
CDH8-214ENST00000585315 GNAI2P04899 355 aa8.72□□□□□ -1.01
CDH8-214ENST00000585315 PDE4CQ08493 712 aa8.71□□□□□ -1.01
CDH8-214ENST00000585315 TSPYL1Q9H0U9 437 aa8.71□□□□□ -1.01
CDH8-214ENST00000585315 CYP46A1Q9Y6A2 500 aa8.71□□□□□ -1.01
CDH8-214ENST00000585315 IGF1RP08069 1367 aa8.71□□□□□ -1.01
CDH8-214ENST00000585315 MTHFSP49914 203 aa8.71□□□□□ -1.01
CDH8-214ENST00000585315 STIM1Q13586 685 aa8.71□□□□□ -1.01
CDH8-214ENST00000585315 FSD1Q9BTV5 496 aa8.71□□□□□ -1.01
CDH8-214ENST00000585315 GAPVD1Q14C86 1478 aa8.71□□□□□ -1.01
CDH8-214ENST00000585315 FANCD2Q9BXW9 1451 aa8.71□□□□□ -1.01
CDH8-214ENST00000585315 ZRSR2Q15696 482 aaKnown RBP8.71□□□□□ -1.01
CDH8-214ENST00000585315 RAPGEF4Q8WZA2 1011 aa8.71□□□□□ -1.01
CDH8-214ENST00000585315 ZSCAN31Q96LW9 406 aaPredicted RBP8.71□□□□□ -1.01
CDH8-214ENST00000585315 KRT32Q14532 448 aa8.71□□□□□ -1.02
CDH8-214ENST00000585315 ATF7IPQ6VMQ6 1270 aa8.71□□□□□ -1.02
CDH8-214ENST00000585315 CEP57L1Q8IYX8 460 aa8.71□□□□□ -1.02
CDH8-214ENST00000585315 STK38Q15208 465 aa8.71□□□□□ -1.02
CDH8-214ENST00000585315 PDZRN3Q9UPQ7 1066 aa8.71□□□□□ -1.02
CDH8-214ENST00000585315 EFCAB5A4FU69 1503 aa8.71□□□□□ -1.02
CDH8-214ENST00000585315 SURF6O75683 361 aaKnown RBP8.71□□□□□ -1.02
CDH8-214ENST00000585315 NCOA2Q15596 1464 aa8.7□□□□□ -1.02
CDH8-214ENST00000585315 KIAA0754O94854 1291 aa8.7□□□□□ -1.02
CDH8-214ENST00000585315 PPP2R1AP30153 589 aa8.7□□□□□ -1.02
CDH8-214ENST00000585315 FIBPO43427 364 aa8.7□□□□□ -1.02
CDH8-214ENST00000585315 CAVIN2O95810 425 aa8.7□□□□□ -1.02
CDH8-214ENST00000585315 GBP3Q9H0R5 595 aa8.7□□□□□ -1.02
CDH8-214ENST00000585315 TRIM22Q8IYM9 498 aa8.7□□□□□ -1.02
CDH8-214ENST00000585315 MAGEC2Q9UBF1 373 aaPredicted RBP8.7□□□□□ -1.02
CDH8-214ENST00000585315 SMC2O95347 1197 aa8.7□□□□□ -1.02
CDH8-214ENST00000585315 SLC3A2P08195 630 aaKnown RBP8.7□□□□□ -1.02
CDH8-214ENST00000585315 PDILTQ8N807 584 aa8.7□□□□□ -1.02
CDH8-214ENST00000585315 PPP6R1Q9UPN7 881 aa8.7□□□□□ -1.02
CDH8-214ENST00000585315 CDKL5O76039 1030 aa8.7□□□□□ -1.02
CDH8-214ENST00000585315 MCM5P33992 734 aa8.7□□□□□ -1.02
CDH8-214ENST00000585315 AXDND1Q5T1B0 1012 aaPredicted RBP8.7□□□□□ -1.02
CDH8-214ENST00000585315 BRPF3Q9ULD4 1205 aa8.69□□□□□ -1.02
CDH8-214ENST00000585315 RUSC2Q8N2Y8 1516 aa8.69□□□□□ -1.02
CDH8-214ENST00000585315 TRHP20396 242 aaPredicted RBP8.69□□□□□ -1.02
CDH8-214ENST00000585315 TNMDQ9H2S6 317 aa8.69□□□□□ -1.02
CDH8-214ENST00000585315 DHX29Q7Z478 1369 aaKnown RBP8.69□□□□□ -1.02
CDH8-214ENST00000585315 MVPQ14764 893 aaKnown RBP8.69□□□□□ -1.02
CDH8-214ENST00000585315 RIC3Q7Z5B4 369 aa8.69□□□□□ -1.02
CDH8-214ENST00000585315 PPFIBP1Q86W92 1011 aa8.69□□□□□ -1.02
CDH8-214ENST00000585315 PKNOX2Q96KN3 472 aa8.69□□□□□ -1.02
CDH8-214ENST00000585315 POLA1P09884 1462 aaPredicted RBP8.69□□□□□ -1.02
CDH8-214ENST00000585315 WASHC4Q2M389 1173 aa8.69□□□□□ -1.02
CDH8-214ENST00000585315 RPAP2Q8IXW5 612 aaPredicted RBP8.69□□□□□ -1.02
CDH8-214ENST00000585315 CTDP1Q9Y5B0 961 aaPredicted RBP8.69□□□□□ -1.02
CDH8-214ENST00000585315 TWISTNBQ3B726 338 aaPredicted RBP8.68□□□□□ -1.02
CDH8-214ENST00000585315 PLEKHH1Q9ULM0 1364 aa8.68□□□□□ -1.02
CDH8-214ENST00000585315 KIAA1107Q9UPP5 1409 aa8.68□□□□□ -1.02
CDH8-214ENST00000585315 CCAR1Q8IX12 1150 aaKnown RBP8.68□□□□□ -1.02
CDH8-214ENST00000585315 LRRCC1Q9C099 1032 aa8.68□□□□□ -1.02
CDH8-214ENST00000585315 CCDC9Q9Y3X0 531 aaKnown RBP8.68□□□□□ -1.02
CDH8-214ENST00000585315 NEUROD6Q96NK8 337 aa8.68□□□□□ -1.02
CDH8-214ENST00000585315 PSME1Q06323 249 aa8.67□□□□□ -1.02
CDH8-214ENST00000585315 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.67□□□□□ -1.02
CDH8-214ENST00000585315 PATL2C9JE40 543 aaKnown RBP8.67□□□□□ -1.02
CDH8-214ENST00000585315 SERPINC1P01008 464 aa8.67□□□□□ -1.02
CDH8-214ENST00000585315 NUTM2DQ5VT03 806 aaPredicted RBP8.67□□□□□ -1.02
CDH8-214ENST00000585315 INCENPQ9NQS7 918 aa8.67□□□□□ -1.02
CDH8-214ENST00000585315 CTNNA3Q9UI47 895 aa8.67□□□□□ -1.02
CDH8-214ENST00000585315 NUTM2FA1L443 756 aa8.67□□□□□ -1.02
CDH8-214ENST00000585315 SMTNL1A8MU46 457 aa8.67□□□□□ -1.02
CDH8-214ENST00000585315 SCAND2PQ9GZW5 306 aaPredicted RBP8.67□□□□□ -1.02
CDH8-214ENST00000585315 EVA1CP58658 441 aa8.67□□□□□ -1.02
CDH8-214ENST00000585315 UBXN4Q92575 508 aa8.67□□□□□ -1.02
CDH8-214ENST00000585315 DEF6Q9H4E7 631 aa8.67□□□□□ -1.02
CDH8-214ENST00000585315 FGD5Q6ZNL6 1462 aa8.67□□□□□ -1.02
CDH8-214ENST00000585315 ANKRD18AQ8IVF6 992 aa8.67□□□□□ -1.02
CDH8-214ENST00000585315 NEMFO60524 1076 aa8.66□□□□□ -1.02
CDH8-214ENST00000585315 LARP1BQ659C4 914 aaKnown RBP8.66□□□□□ -1.02
CDH8-214ENST00000585315 NACAP1Q9BZK3 213 aa8.66□□□□□ -1.02
CDH8-214ENST00000585315 MCM3P25205 808 aa8.66□□□□□ -1.02
CDH8-214ENST00000585315 ME1P48163 572 aa8.66□□□□□ -1.02
CDH8-214ENST00000585315 HSP90AB2PQ58FF8 381 aa8.66□□□□□ -1.02
CDH8-214ENST00000585315 BLOC1S2Q6QNY1 142 aa8.66□□□□□ -1.02
CDH8-214ENST00000585315 ZNF692Q9BU19 519 aaPredicted RBP8.66□□□□□ -1.02
CDH8-214ENST00000585315 FAM107BQ9H098 131 aa8.66□□□□□ -1.02
CDH8-214ENST00000585315 CHD1LQ86WJ1 897 aa8.66□□□□□ -1.02
CDH8-214ENST00000585315 NUP62CLQ9H1M0 184 aa8.66□□□□□ -1.02
CDH8-214ENST00000585315 CDCA7LQ96GN5 454 aa8.66□□□□□ -1.02
CDH8-214ENST00000585315 AKNAQ7Z591 1439 aa8.65□□□□□ -1.02
CDH8-214ENST00000585315 EHBP1L1Q8N3D4 1523 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms