RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 PRR20DP86480 221 aa8.77□□□□□ -1.01
CDH8-213ENST00000584966 PRR20BP86481 221 aa8.77□□□□□ -1.01
CDH8-213ENST00000584966 PRR20AP86496 221 aa8.77□□□□□ -1.01
CDH8-213ENST00000584966 EFCAB2Q5VUJ9 269 aa8.77□□□□□ -1.01
CDH8-213ENST00000584966 TNFRSF10AO00220 468 aa8.76□□□□□ -1.01
CDH8-213ENST00000584966 ST8SIA5O15466 376 aa8.76□□□□□ -1.01
CDH8-213ENST00000584966 PPARGC1BQ86YN6 1023 aaKnown RBP8.76□□□□□ -1.01
CDH8-213ENST00000584966 SLF2Q8IX21 1173 aa8.76□□□□□ -1.01
CDH8-213ENST00000584966 MYOM3Q5VTT5 1437 aa8.76□□□□□ -1.01
CDH8-213ENST00000584966 ZNF644Q9H582 1327 aaPredicted RBP8.76□□□□□ -1.01
CDH8-213ENST00000584966 ADGRL1O94910 1474 aa8.76□□□□□ -1.01
CDH8-213ENST00000584966 SCAPERQ9BY12 1400 aa8.75□□□□□ -1.01
CDH8-213ENST00000584966 GRXCR2A6NFK2 248 aa8.75□□□□□ -1.01
CDH8-213ENST00000584966 PPEF1O14829 653 aaPredicted RBP8.75□□□□□ -1.01
CDH8-213ENST00000584966 ZNF697Q5TEC3 545 aa8.75□□□□□ -1.01
CDH8-213ENST00000584966 CDHR5Q9HBB8 845 aa8.75□□□□□ -1.01
CDH8-213ENST00000584966 CFDP1Q9UEE9 299 aaPredicted RBP8.75□□□□□ -1.01
CDH8-213ENST00000584966 PTPN23Q9H3S7 1636 aa8.75□□□□□ -1.01
CDH8-213ENST00000584966 MBD5Q9P267 1494 aa8.75□□□□□ -1.01
CDH8-213ENST00000584966 KDM5CP41229 1560 aa8.74□□□□□ -1.01
CDH8-213ENST00000584966 KIDINS220Q9ULH0 1771 aa8.74□□□□□ -1.01
CDH8-213ENST00000584966 MIA2Q96PC5 1412 aa8.74□□□□□ -1.01
CDH8-213ENST00000584966 KIAA1107Q9UPP5 1409 aa8.74□□□□□ -1.01
CDH8-213ENST00000584966 TRAPPC8Q9Y2L5 1435 aa8.74□□□□□ -1.01
CDH8-213ENST00000584966 RAPGEF3O95398 923 aa8.74□□□□□ -1.01
CDH8-213ENST00000584966 PCDHB3Q9Y5E6 796 aa8.74□□□□□ -1.01
CDH8-213ENST00000584966 DENND4BO75064 1496 aaPredicted RBP8.74□□□□□ -1.01
CDH8-213ENST00000584966 CAMSAP2Q08AD1 1489 aa8.74□□□□□ -1.01
CDH8-213ENST00000584966 ZMYM4Q5VZL5 1548 aa8.74□□□□□ -1.01
CDH8-213ENST00000584966 SYCP2Q9BX26 1530 aa8.74□□□□□ -1.01
CDH8-213ENST00000584966 POGZQ7Z3K3 1410 aa8.73□□□□□ -1.01
CDH8-213ENST00000584966 TCOF1Q13428 1488 aaKnown RBP8.73□□□□□ -1.01
CDH8-213ENST00000584966 SPDYE16A6NNV3 312 aaPredicted RBP8.73□□□□□ -1.01
CDH8-213ENST00000584966 TLL1O43897 1013 aa8.73□□□□□ -1.01
CDH8-213ENST00000584966 BLOC1S3Q6QNY0 202 aa8.73□□□□□ -1.01
CDH8-213ENST00000584966 LIAT1Q6ZQX7 453 aa8.73□□□□□ -1.01
CDH8-213ENST00000584966 AAASQ9NRG9 546 aa8.73□□□□□ -1.01
CDH8-213ENST00000584966 SIGLEC1Q9BZZ2 1709 aa8.73□□□□□ -1.01
CDH8-213ENST00000584966 ARHGEF5Q12774 1597 aa8.73□□□□□ -1.01
CDH8-213ENST00000584966 FGD6Q6ZV73 1430 aa8.72□□□□□ -1.01
CDH8-213ENST00000584966 GDF9O60383 454 aa8.72□□□□□ -1.01
CDH8-213ENST00000584966 HNRNPMP52272 730 aaKnown RBP eCLIP8.72□□□□□ -1.01
CDH8-213ENST00000584966 AFAP1Q8N556 730 aa8.72□□□□□ -1.01
CDH8-213ENST00000584966 ZNF777Q9ULD5 760 aaPredicted RBP8.72□□□□□ -1.01
CDH8-213ENST00000584966 CROCC2H7BZ55 1655 aa8.72□□□□□ -1.01
CDH8-213ENST00000584966 PLEKHH2Q8IVE3 1493 aa8.71□□□□□ -1.01
CDH8-213ENST00000584966 ANKLE1Q8NAG6 615 aa8.71□□□□□ -1.02
CDH8-213ENST00000584966 ZNF518AQ6AHZ1 1483 aa8.7□□□□□ -1.02
CDH8-213ENST00000584966 INO80Q9ULG1 1556 aaPredicted RBP8.7□□□□□ -1.02
CDH8-213ENST00000584966 DNMT1P26358 1616 aaKnown RBP8.7□□□□□ -1.02
CDH8-213ENST00000584966 S1PR4O95977 384 aa8.7□□□□□ -1.02
CDH8-213ENST00000584966 SLC4A3P48751 1232 aa8.7□□□□□ -1.02
CDH8-213ENST00000584966 RBM27Q9P2N5 1060 aaKnown RBP8.7□□□□□ -1.02
CDH8-213ENST00000584966 MLH3Q9UHC1 1453 aa8.7□□□□□ -1.02
CDH8-213ENST00000584966 HECW2Q9P2P5 1572 aa8.69□□□□□ -1.02
CDH8-213ENST00000584966 ABCA6Q8N139 1617 aa8.69□□□□□ -1.02
CDH8-213ENST00000584966 PADI6Q6TGC4 694 aa8.69□□□□□ -1.02
CDH8-213ENST00000584966 PRR14Q9BWN1 585 aa8.69□□□□□ -1.02
CDH8-213ENST00000584966 MAGI2Q86UL8 1455 aa8.69□□□□□ -1.02
CDH8-213ENST00000584966 MAST1Q9Y2H9 1570 aa8.69□□□□□ -1.02
CDH8-213ENST00000584966 ADGBQ8N7X0 1667 aa8.69□□□□□ -1.02
CDH8-213ENST00000584966 WFS1O76024 890 aa8.68□□□□□ -1.02
CDH8-213ENST00000584966 RRBP1Q9P2E9 1410 aaKnown RBP8.68□□□□□ -1.02
CDH8-213ENST00000584966 YEATS2Q9ULM3 1422 aa8.68□□□□□ -1.02
CDH8-213ENST00000584966 ARHGEF40Q8TER5 1519 aa8.68□□□□□ -1.02
CDH8-213ENST00000584966 DIP2CQ9Y2E4 1556 aa8.68□□□□□ -1.02
CDH8-213ENST00000584966 ABCC5O15440 1437 aa8.67□□□□□ -1.02
CDH8-213ENST00000584966 CCDC141Q6ZP82 1450 aa8.67□□□□□ -1.02
CDH8-213ENST00000584966 ZFYVE16Q7Z3T8 1539 aa8.67□□□□□ -1.02
CDH8-213ENST00000584966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.67□□□□□ -1.02
CDH8-213ENST00000584966 ATP7AQ04656 1500 aa8.66□□□□□ -1.02
CDH8-213ENST00000584966 RTEL1-TNFRSF6BF6WH68 1400 aa8.66□□□□□ -1.02
CDH8-213ENST00000584966 PTPRKQ15262 1439 aa8.66□□□□□ -1.02
CDH8-213ENST00000584966 RSPH4AQ5TD94 716 aa8.66□□□□□ -1.02
CDH8-213ENST00000584966 TTC13Q8NBP0 860 aa8.66□□□□□ -1.02
CDH8-213ENST00000584966 STK17AQ9UEE5 414 aa8.66□□□□□ -1.02
CDH8-213ENST00000584966 DACH1Q9UI36 760 aa8.66□□□□□ -1.02
CDH8-213ENST00000584966 REREQ9P2R6 1566 aa8.65□□□□□ -1.02
CDH8-213ENST00000584966 DAPK1P53355 1430 aa8.65□□□□□ -1.02
CDH8-213ENST00000584966 OSBPP22059 807 aa8.65□□□□□ -1.02
CDH8-213ENST00000584966 ATP10AO60312 1499 aa8.64□□□□□ -1.03
CDH8-213ENST00000584966 SPAG9O60271 1321 aaKnown RBP8.64□□□□□ -1.03
CDH8-213ENST00000584966 PLXNC1O60486 1568 aa8.64□□□□□ -1.03
CDH8-213ENST00000584966 SHANK2Q9UPX8 1470 aa8.64□□□□□ -1.03
CDH8-213ENST00000584966 BCORL1Q5H9F3 1711 aa8.63□□□□□ -1.03
CDH8-213ENST00000584966 FOXC1Q12948 553 aa8.63□□□□□ -1.03
CDH8-213ENST00000584966 PLA2G2CQ5R387 149 aa8.63□□□□□ -1.03
CDH8-213ENST00000584966 C9orf84Q5VXU9 1444 aa8.63□□□□□ -1.03
CDH8-213ENST00000584966 FAM50AQ14320 339 aaKnown RBP8.62□□□□□ -1.03
CDH8-213ENST00000584966 EYA1Q99502 592 aa8.62□□□□□ -1.03
CDH8-213ENST00000584966 GMPR2Q9P2T1 348 aaKnown RBP8.62□□□□□ -1.03
CDH8-213ENST00000584966 ADGRL2O95490 1459 aa8.62□□□□□ -1.03
CDH8-213ENST00000584966 ADAMTSL3P82987 1691 aa8.62□□□□□ -1.03
CDH8-213ENST00000584966 AGLP35573 1532 aa8.61□□□□□ -1.03
CDH8-213ENST00000584966 C11orf95C9JLR9 678 aaPredicted RBP8.61□□□□□ -1.03
CDH8-213ENST00000584966 TSPY4P0CV99 314 aa8.61□□□□□ -1.03
CDH8-213ENST00000584966 TSPY10P0CW01 314 aa8.61□□□□□ -1.03
CDH8-213ENST00000584966 NPDC1Q9NQX5 325 aaPredicted RBP8.61□□□□□ -1.03
CDH8-213ENST00000584966 NCOA1Q15788 1441 aa8.61□□□□□ -1.03
CDH8-213ENST00000584966 A2MP01023 1474 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms