RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 USP21Q9UK80 565 aa23.88■■□□□ 1.41
CSNK1D-225ENST00000584913 SRPK2P78362 688 aaKnown RBP23.87■■□□□ 1.41
CSNK1D-225ENST00000584913 QTRT2Q9H974 415 aaKnown RBP23.87■■□□□ 1.41
CSNK1D-225ENST00000584913 CARD11Q9BXL7 1154 aa23.85■■□□□ 1.41
CSNK1D-225ENST00000584913 ACEP12821 1306 aa23.84■■□□□ 1.41
CSNK1D-225ENST00000584913 ATAD2Q6PL18 1390 aa23.84■■□□□ 1.41
CSNK1D-225ENST00000584913 HAP1P54257 671 aaPredicted RBP23.83■■□□□ 1.41
CSNK1D-225ENST00000584913 PLCH1Q4KWH8 1693 aa23.83■■□□□ 1.4
CSNK1D-225ENST00000584913 SLC24A1O60721 1099 aa23.82■■□□□ 1.4
CSNK1D-225ENST00000584913 RGS12O14924 1447 aa23.82■■□□□ 1.4
CSNK1D-225ENST00000584913 COL14A1Q05707 1796 aaKnown RBP23.81■■□□□ 1.4
CSNK1D-225ENST00000584913 LMOD2Q6P5Q4 547 aa23.81■■□□□ 1.4
CSNK1D-225ENST00000584913 PHRF1Q9P1Y6 1649 aaKnown RBP23.81■■□□□ 1.4
CSNK1D-225ENST00000584913 UNC5CLQ8IV45 518 aa23.8■■□□□ 1.4
CSNK1D-225ENST00000584913 CABP2Q9NPB3 220 aa23.8■■□□□ 1.4
CSNK1D-225ENST00000584913 USP6P35125 1406 aa23.79■■□□□ 1.4
CSNK1D-225ENST00000584913 PUS7Q96PZ0 661 aaKnown RBP23.79■■□□□ 1.4
CSNK1D-225ENST00000584913 PAK3O75914 559 aaPredicted RBP23.77■■□□□ 1.4
CSNK1D-225ENST00000584913 CABLES1Q8TDN4 633 aa23.77■■□□□ 1.4
CSNK1D-225ENST00000584913 NRAPQ86VF7 1730 aa23.76■■□□□ 1.39
CSNK1D-225ENST00000584913 SSH2Q76I76 1423 aa23.76■■□□□ 1.39
CSNK1D-225ENST00000584913 USP19O94966 1318 aa23.75■■□□□ 1.39
CSNK1D-225ENST00000584913 AKAP12Q02952 1782 aa23.75■■□□□ 1.39
CSNK1D-225ENST00000584913 NRKQ7Z2Y5 1582 aa23.74■■□□□ 1.39
CSNK1D-225ENST00000584913 GJD4Q96KN9 370 aaPredicted RBP23.74■■□□□ 1.39
CSNK1D-225ENST00000584913 ZNF692Q9BU19 519 aaPredicted RBP23.74■■□□□ 1.39
CSNK1D-225ENST00000584913 CABP1Q9NZU7 370 aa23.74■■□□□ 1.39
CSNK1D-225ENST00000584913 CPSF1Q10570 1443 aaKnown RBP23.74■■□□□ 1.39
CSNK1D-225ENST00000584913 VPS72Q15906 364 aa23.73■■□□□ 1.39
CSNK1D-225ENST00000584913 PCGF6Q9BYE7 350 aa23.73■■□□□ 1.39
CSNK1D-225ENST00000584913 GLI3P10071 1580 aa23.73■■□□□ 1.39
CSNK1D-225ENST00000584913 CPDO75976 1380 aa23.71■■□□□ 1.39
CSNK1D-225ENST00000584913 SLIT3O75094 1523 aa23.7■■□□□ 1.38
CSNK1D-225ENST00000584913 NINLQ9Y2I6 1382 aa23.7■■□□□ 1.38
CSNK1D-225ENST00000584913 FAM83GA6ND36 823 aa23.7■■□□□ 1.38
CSNK1D-225ENST00000584913 NLRP13Q86W25 1043 aa23.7■■□□□ 1.38
CSNK1D-225ENST00000584913 ABTB2Q8N961 1025 aa23.69■■□□□ 1.38
CSNK1D-225ENST00000584913 MON2Q7Z3U7 1717 aa23.69■■□□□ 1.38
CSNK1D-225ENST00000584913 TTC21AQ8NDW8 1320 aa23.68■■□□□ 1.38
CSNK1D-225ENST00000584913 PIK3C2AO00443 1686 aa23.67■■□□□ 1.38
CSNK1D-225ENST00000584913 TESK2Q96S53 571 aa23.66■■□□□ 1.38
CSNK1D-225ENST00000584913 PRDM11Q9NQV5 511 aa23.66■■□□□ 1.38
CSNK1D-225ENST00000584913 USP54Q70EL1 1684 aa23.66■■□□□ 1.38
CSNK1D-225ENST00000584913 KIAA0232Q92628 1395 aa23.65■■□□□ 1.38
CSNK1D-225ENST00000584913 ONECUT3O60422 494 aaPredicted RBP23.65■■□□□ 1.38
CSNK1D-225ENST00000584913 LMO7Q8WWI1 1683 aa23.64■■□□□ 1.38
CSNK1D-225ENST00000584913 UPF1Q92900 1129 aaKnown RBP eCLIP23.64■■□□□ 1.37
CSNK1D-225ENST00000584913 USP47Q96K76 1375 aa23.64■■□□□ 1.37
CSNK1D-225ENST00000584913 CD163L1Q9NR16 1453 aa23.63■■□□□ 1.37
CSNK1D-225ENST00000584913 BTG4Q9NY30 223 aa23.63■■□□□ 1.37
CSNK1D-225ENST00000584913 ST20-MTHFSA0A0A6YYL1 179 aa23.62■■□□□ 1.37
CSNK1D-225ENST00000584913 KTN1Q86UP2 1357 aaKnown RBP23.62■■□□□ 1.37
CSNK1D-225ENST00000584913 TTC21BQ7Z4L5 1316 aa23.61■■□□□ 1.37
CSNK1D-225ENST00000584913 ABCC6O95255 1503 aa23.6■■□□□ 1.37
CSNK1D-225ENST00000584913 GCP02774 474 aa23.6■■□□□ 1.37
CSNK1D-225ENST00000584913 EDC4Q6P2E9 1401 aaKnown RBP23.59■■□□□ 1.37
CSNK1D-225ENST00000584913 USP31Q70CQ4 1352 aa23.58■■□□□ 1.37
CSNK1D-225ENST00000584913 PLEKHG5O94827 1062 aa23.58■■□□□ 1.37
CSNK1D-225ENST00000584913 NLRP6P59044 892 aa23.58■■□□□ 1.37
CSNK1D-225ENST00000584913 SPATA31A5Q5VU36 1347 aa23.58■■□□□ 1.36
CSNK1D-225ENST00000584913 SPATA31A7Q8IWB4 1347 aa23.58■■□□□ 1.36
CSNK1D-225ENST00000584913 NUTM2GQ5VZR2 741 aa23.57■■□□□ 1.36
CSNK1D-225ENST00000584913 HDGFL2Q7Z4V5 671 aaPredicted RBP23.57■■□□□ 1.36
CSNK1D-225ENST00000584913 KCNH5Q8NCM2 988 aa23.57■■□□□ 1.36
CSNK1D-225ENST00000584913 TERF2IPQ9NYB0 399 aa23.57■■□□□ 1.36
CSNK1D-225ENST00000584913 AATKQ6ZMQ8 1374 aa23.56■■□□□ 1.36
CSNK1D-225ENST00000584913 THSD7AQ9UPZ6 1657 aa23.56■■□□□ 1.36
CSNK1D-225ENST00000584913 ZC3H6P61129 1189 aaKnown RBP23.55■■□□□ 1.36
CSNK1D-225ENST00000584913 TMF1P82094 1093 aa23.55■■□□□ 1.36
CSNK1D-225ENST00000584913 CDCA8Q53HL2 280 aa23.55■■□□□ 1.36
CSNK1D-225ENST00000584913 CCER1Q8TC90 406 aaPredicted RBP23.55■■□□□ 1.36
CSNK1D-225ENST00000584913 CAMTA1Q9Y6Y1 1673 aa23.54■■□□□ 1.36
CSNK1D-225ENST00000584913 CCDC125Q86Z20 511 aa23.54■■□□□ 1.36
CSNK1D-225ENST00000584913 A0A1W2PP64 1363 aa23.53■■□□□ 1.36
CSNK1D-225ENST00000584913 CCDC9Q9Y3X0 531 aaKnown RBP23.53■■□□□ 1.36
CSNK1D-225ENST00000584913 NFAT5O94916 1531 aa23.53■■□□□ 1.36
CSNK1D-225ENST00000584913 COL5A2P05997 1499 aaPredicted RBP23.52■■□□□ 1.36
CSNK1D-225ENST00000584913 SEPT12Q8IYM1 358 aa23.52■■□□□ 1.36
CSNK1D-225ENST00000584913 SPATA31A1Q5TZJ5 1347 aa23.52■■□□□ 1.36
CSNK1D-225ENST00000584913 BRWD3Q6RI45 1802 aa23.52■■□□□ 1.36
CSNK1D-225ENST00000584913 COL18A1P39060 1754 aa23.5■■□□□ 1.35
CSNK1D-225ENST00000584913 CHRNA2Q15822 529 aa23.5■■□□□ 1.35
CSNK1D-225ENST00000584913 TMC1Q8TDI8 760 aa23.5■■□□□ 1.35
CSNK1D-225ENST00000584913 SLC12A5Q9H2X9 1139 aa23.5■■□□□ 1.35
CSNK1D-225ENST00000584913 ANKRD36BQ8N2N9 1353 aa23.5■■□□□ 1.35
CSNK1D-225ENST00000584913 BARGINQ6ZT62 677 aa23.48■■□□□ 1.35
CSNK1D-225ENST00000584913 THRAP3Q9Y2W1 955 aaKnown RBP23.48■■□□□ 1.35
CSNK1D-225ENST00000584913 OVOS2A0A0J9YW53 1432 aa23.48■■□□□ 1.35
CSNK1D-225ENST00000584913 OVOS2Q6IE36 1432 aa23.48■■□□□ 1.35
CSNK1D-225ENST00000584913 ARHGEF25Q86VW2 580 aa23.47■■□□□ 1.35
CSNK1D-225ENST00000584913 BLMP54132 1417 aaPredicted RBP23.46■■□□□ 1.35
CSNK1D-225ENST00000584913 CRB1P82279 1406 aa23.46■■□□□ 1.35
CSNK1D-225ENST00000584913 KRT27Q7Z3Y8 459 aa23.46■■□□□ 1.35
CSNK1D-225ENST00000584913 EP400Q96L91 3159 aa23.46■■□□□ 1.35
CSNK1D-225ENST00000584913 EVA1CP58658 441 aa23.45■■□□□ 1.34
CSNK1D-225ENST00000584913 FAM98CQ17RN3 349 aaKnown RBP23.45■■□□□ 1.34
CSNK1D-225ENST00000584913 STRN4Q9NRL3 753 aa23.43■■□□□ 1.34
CSNK1D-225ENST00000584913 MYOM1P52179 1685 aa23.41■■□□□ 1.34
CSNK1D-225ENST00000584913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.41■■□□□ 1.34
CSNK1D-225ENST00000584913 TCP11L2Q8N4U5 519 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms