RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 NWD2Q9ULI1 1742 aa25.59■■□□□ 1.69
ERBB2-221ENST00000584888 PLCH1Q4KWH8 1693 aa25.58■■□□□ 1.69
ERBB2-221ENST00000584888 SEPT12Q8IYM1 358 aa25.58■■□□□ 1.69
ERBB2-221ENST00000584888 CCDC61Q9Y6R9 512 aa25.58■■□□□ 1.69
ERBB2-221ENST00000584888 ONECUT3O60422 494 aaPredicted RBP25.57■■□□□ 1.68
ERBB2-221ENST00000584888 BTG4Q9NY30 223 aa25.57■■□□□ 1.68
ERBB2-221ENST00000584888 ITSN1Q15811 1721 aa25.55■■□□□ 1.68
ERBB2-221ENST00000584888 ACEP12821 1306 aa25.54■■□□□ 1.68
ERBB2-221ENST00000584888 CENPJQ9HC77 1338 aaPredicted RBP25.54■■□□□ 1.68
ERBB2-221ENST00000584888 POLR3AO14802 1390 aaPredicted RBP25.54■■□□□ 1.68
ERBB2-221ENST00000584888 PLEKHG3A1L390 1219 aa25.53■■□□□ 1.68
ERBB2-221ENST00000584888 TONSLQ96HA7 1378 aa25.53■■□□□ 1.68
ERBB2-221ENST00000584888 ROCK2O75116 1388 aaKnown RBP25.51■■□□□ 1.67
ERBB2-221ENST00000584888 PCGF6Q9BYE7 350 aa25.5■■□□□ 1.67
ERBB2-221ENST00000584888 PRDM11Q9NQV5 511 aa25.5■■□□□ 1.67
ERBB2-221ENST00000584888 BRWD3Q6RI45 1802 aa25.49■■□□□ 1.67
ERBB2-221ENST00000584888 COL14A1Q05707 1796 aaKnown RBP25.49■■□□□ 1.67
ERBB2-221ENST00000584888 QRICH2Q9H0J4 1663 aa25.49■■□□□ 1.67
ERBB2-221ENST00000584888 SRPK2P78362 688 aaKnown RBP25.49■■□□□ 1.67
ERBB2-221ENST00000584888 NUTM2GQ5VZR2 741 aa25.49■■□□□ 1.67
ERBB2-221ENST00000584888 KRT27Q7Z3Y8 459 aa25.49■■□□□ 1.67
ERBB2-221ENST00000584888 EP400Q96L91 3159 aa25.49■■□□□ 1.67
ERBB2-221ENST00000584888 NRAPQ86VF7 1730 aa25.49■■□□□ 1.67
ERBB2-221ENST00000584888 FAM98CQ17RN3 349 aaKnown RBP25.48■■□□□ 1.67
ERBB2-221ENST00000584888 CRYBG1Q9Y4K1 1723 aa25.48■■□□□ 1.67
ERBB2-221ENST00000584888 TOPAZ1Q8N9V7 1692 aa25.48■■□□□ 1.67
ERBB2-221ENST00000584888 BLMP54132 1417 aaPredicted RBP25.47■■□□□ 1.67
ERBB2-221ENST00000584888 A0A0G2JS52 829 aa25.47■■□□□ 1.67
ERBB2-221ENST00000584888 MYT1Q01538 1121 aa25.47■■□□□ 1.67
ERBB2-221ENST00000584888 CABP2Q9NPB3 220 aa25.47■■□□□ 1.67
ERBB2-221ENST00000584888 KIAA0232Q92628 1395 aa25.46■■□□□ 1.67
ERBB2-221ENST00000584888 SPATA31A5Q5VU36 1347 aa25.45■■□□□ 1.66
ERBB2-221ENST00000584888 SPATA31A7Q8IWB4 1347 aa25.45■■□□□ 1.66
ERBB2-221ENST00000584888 ZRANB1Q9UGI0 708 aa25.45■■□□□ 1.66
ERBB2-221ENST00000584888 ZC3H6P61129 1189 aaKnown RBP25.44■■□□□ 1.66
ERBB2-221ENST00000584888 CHRNA2Q15822 529 aa25.44■■□□□ 1.66
ERBB2-221ENST00000584888 ABTB2Q8N961 1025 aa25.44■■□□□ 1.66
ERBB2-221ENST00000584888 PPIP5K1Q6PFW1 1433 aa25.44■■□□□ 1.66
ERBB2-221ENST00000584888 CLSPNQ9HAW4 1339 aa25.42■■□□□ 1.66
ERBB2-221ENST00000584888 SF3B2Q13435 895 aaKnown RBP25.41■■□□□ 1.66
ERBB2-221ENST00000584888 DEFB132Q7Z7B7 95 aa25.4■■□□□ 1.66
ERBB2-221ENST00000584888 CABP1Q9NZU7 370 aa25.4■■□□□ 1.66
ERBB2-221ENST00000584888 CARD11Q9BXL7 1154 aa25.39■■□□□ 1.66
ERBB2-221ENST00000584888 PHRF1Q9P1Y6 1649 aaKnown RBP25.38■■□□□ 1.65
ERBB2-221ENST00000584888 STRN4Q9NRL3 753 aa25.38■■□□□ 1.65
ERBB2-221ENST00000584888 NLRP13Q86W25 1043 aa25.37■■□□□ 1.65
ERBB2-221ENST00000584888 USP19O94966 1318 aa25.37■■□□□ 1.65
ERBB2-221ENST00000584888 SPATA31A1Q5TZJ5 1347 aa25.37■■□□□ 1.65
ERBB2-221ENST00000584888 EVC2Q86UK5 1308 aa25.37■■□□□ 1.65
ERBB2-221ENST00000584888 SBNO2Q9Y2G9 1366 aa25.35■■□□□ 1.65
ERBB2-221ENST00000584888 BRD4O60885 1362 aaPredicted RBP25.34■■□□□ 1.65
ERBB2-221ENST00000584888 EVA1CP58658 441 aa25.34■■□□□ 1.65
ERBB2-221ENST00000584888 TIMELESSQ9UNS1 1208 aa25.34■■□□□ 1.65
ERBB2-221ENST00000584888 GCP02774 474 aa25.33■■□□□ 1.65
ERBB2-221ENST00000584888 FAM182BQ5T319 152 aa25.33■■□□□ 1.65
ERBB2-221ENST00000584888 CPDO75976 1380 aa25.32■■□□□ 1.64
ERBB2-221ENST00000584888 NRKQ7Z2Y5 1582 aa25.31■■□□□ 1.64
ERBB2-221ENST00000584888 USP6P35125 1406 aa25.31■■□□□ 1.64
ERBB2-221ENST00000584888 THSD7AQ9UPZ6 1657 aa25.3■■□□□ 1.64
ERBB2-221ENST00000584888 USP35Q9P2H5 1018 aa25.3■■□□□ 1.64
ERBB2-221ENST00000584888 CAMTA1Q9Y6Y1 1673 aa25.29■■□□□ 1.64
ERBB2-221ENST00000584888 SSH2Q76I76 1423 aa25.29■■□□□ 1.64
ERBB2-221ENST00000584888 NLRP6P59044 892 aa25.29■■□□□ 1.64
ERBB2-221ENST00000584888 BAG6P46379 1132 aa25.28■■□□□ 1.64
ERBB2-221ENST00000584888 LARP1Q6PKG0 1096 aaKnown RBP25.28■■□□□ 1.64
ERBB2-221ENST00000584888 BARGINQ6ZT62 677 aa25.26■■□□□ 1.63
ERBB2-221ENST00000584888 ZNF692Q9BU19 519 aaPredicted RBP25.25■■□□□ 1.63
ERBB2-221ENST00000584888 LMO7Q8WWI1 1683 aa25.24■■□□□ 1.63
ERBB2-221ENST00000584888 TCP11L2Q8N4U5 519 aa25.23■■□□□ 1.63
ERBB2-221ENST00000584888 TESK2Q96S53 571 aa25.23■■□□□ 1.63
ERBB2-221ENST00000584888 ZBTB7CA1YPR0 619 aa25.22■■□□□ 1.63
ERBB2-221ENST00000584888 EN1Q05925 392 aaPredicted RBP25.21■■□□□ 1.63
ERBB2-221ENST00000584888 FAM196AQ6ZSG2 479 aa25.21■■□□□ 1.63
ERBB2-221ENST00000584888 AKAP12Q02952 1782 aa25.21■■□□□ 1.63
ERBB2-221ENST00000584888 TTC21BQ7Z4L5 1316 aa25.2■■□□□ 1.62
ERBB2-221ENST00000584888 ST20-MTHFSA0A0A6YYL1 179 aa25.2■■□□□ 1.62
ERBB2-221ENST00000584888 PUS7Q96PZ0 661 aaKnown RBP25.2■■□□□ 1.62
ERBB2-221ENST00000584888 SRCAPQ6ZRS2 3230 aa25.2■■□□□ 1.62
ERBB2-221ENST00000584888 SLIT3O75094 1523 aa25.2■■□□□ 1.62
ERBB2-221ENST00000584888 AATKQ6ZMQ8 1374 aa25.19■■□□□ 1.62
ERBB2-221ENST00000584888 PDE3BQ13370 1112 aa25.19■■□□□ 1.62
ERBB2-221ENST00000584888 THRAP3Q9Y2W1 955 aaKnown RBP25.19■■□□□ 1.62
ERBB2-221ENST00000584888 COL5A2P05997 1499 aaPredicted RBP25.19■■□□□ 1.62
ERBB2-221ENST00000584888 CPSF1Q10570 1443 aaKnown RBP25.19■■□□□ 1.62
ERBB2-221ENST00000584888 TRIM37O94972 964 aa25.18■■□□□ 1.62
ERBB2-221ENST00000584888 CCER1Q8TC90 406 aaPredicted RBP25.18■■□□□ 1.62
ERBB2-221ENST00000584888 RGPD1P0DJD0 1748 aa25.17■■□□□ 1.62
ERBB2-221ENST00000584888 PIK3C2AO00443 1686 aa25.17■■□□□ 1.62
ERBB2-221ENST00000584888 TTC21AQ8NDW8 1320 aa25.15■■□□□ 1.62
ERBB2-221ENST00000584888 DISP2A7MBM2 1401 aa25.15■■□□□ 1.62
ERBB2-221ENST00000584888 KTN1Q86UP2 1357 aaKnown RBP25.15■■□□□ 1.62
ERBB2-221ENST00000584888 CRB1P82279 1406 aa25.14■■□□□ 1.62
ERBB2-221ENST00000584888 KCNH5Q8NCM2 988 aa25.14■■□□□ 1.62
ERBB2-221ENST00000584888 PSDA5PKW4 1024 aaPredicted RBP25.13■■□□□ 1.61
ERBB2-221ENST00000584888 SLC24A1O60721 1099 aa25.13■■□□□ 1.61
ERBB2-221ENST00000584888 ARHGEF25Q86VW2 580 aa25.13■■□□□ 1.61
ERBB2-221ENST00000584888 AXIN2Q9Y2T1 843 aa25.13■■□□□ 1.61
ERBB2-221ENST00000584888 USP47Q96K76 1375 aa25.13■■□□□ 1.61
ERBB2-221ENST00000584888 CD163L1Q9NR16 1453 aa25.13■■□□□ 1.61
ERBB2-221ENST00000584888 SOX12O15370 315 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms