RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 RC3H1Q5TC82 1133 aaKnown RBP10.57□□□□□ -0.72
NLK-206ENST00000584878 BAP1Q92560 729 aa10.57□□□□□ -0.72
NLK-206ENST00000584878 SH3BP2P78314 561 aa10.56□□□□□ -0.72
NLK-206ENST00000584878 PKDCCQ504Y2 493 aa10.56□□□□□ -0.72
NLK-206ENST00000584878 CYP4X1Q8N118 509 aa10.56□□□□□ -0.72
NLK-206ENST00000584878 TOR4AQ9NXH8 423 aa10.56□□□□□ -0.72
NLK-206ENST00000584878 WNT7BP56706 349 aa10.55□□□□□ -0.72
NLK-206ENST00000584878 TRAF7Q6Q0C0 670 aa10.55□□□□□ -0.72
NLK-206ENST00000584878 TTC24A2A3L6 582 aaPredicted RBP10.53□□□□□ -0.72
NLK-206ENST00000584878 PPP2R2DQ66LE6 453 aa10.53□□□□□ -0.72
NLK-206ENST00000584878 LRRN4Q8WUT4 740 aa10.53□□□□□ -0.72
NLK-206ENST00000584878 ZNF511Q8NB15 262 aa10.52□□□□□ -0.73
NLK-206ENST00000584878 EHBP1Q8NDI1 1231 aa10.52□□□□□ -0.73
NLK-206ENST00000584878 PCMTD1Q96MG8 357 aaPredicted RBP10.52□□□□□ -0.73
NLK-206ENST00000584878 J3QL48 77 aa10.51□□□□□ -0.73
NLK-206ENST00000584878 AP1G2O75843 785 aa10.51□□□□□ -0.73
NLK-206ENST00000584878 DGAT1O75907 488 aa10.51□□□□□ -0.73
NLK-206ENST00000584878 MYT1Q01538 1121 aa10.5□□□□□ -0.73
NLK-206ENST00000584878 SNIP1Q8TAD8 396 aaKnown RBP10.5□□□□□ -0.73
NLK-206ENST00000584878 ST8SIA5O15466 376 aa10.49□□□□□ -0.73
NLK-206ENST00000584878 SMPD1P17405 629 aa10.49□□□□□ -0.73
NLK-206ENST00000584878 RFC5P40937 340 aa10.49□□□□□ -0.73
NLK-206ENST00000584878 FOXJ1Q92949 421 aa10.49□□□□□ -0.73
NLK-206ENST00000584878 GOPCQ9HD26 462 aa10.49□□□□□ -0.73
NLK-206ENST00000584878 TLL2Q9Y6L7 1015 aa10.48□□□□□ -0.73
NLK-206ENST00000584878 SIAH2O43255 324 aa10.47□□□□□ -0.73
NLK-206ENST00000584878 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
NLK-206ENST00000584878 NR6A1Q15406 480 aa10.46□□□□□ -0.73
NLK-206ENST00000584878 HMX1Q9NP08 348 aaPredicted RBP10.46□□□□□ -0.73
NLK-206ENST00000584878 USP17L8P0C7I0 530 aa10.45□□□□□ -0.74
NLK-206ENST00000584878 C4orf48Q5BLP8 95 aa10.45□□□□□ -0.74
NLK-206ENST00000584878 EPS8L1Q8TE68 723 aa10.45□□□□□ -0.74
NLK-206ENST00000584878 HPS1Q92902 700 aa10.44□□□□□ -0.74
NLK-206ENST00000584878 AGERQ15109 404 aa10.43□□□□□ -0.74
NLK-206ENST00000584878 AAASQ9NRG9 546 aa10.43□□□□□ -0.74
NLK-206ENST00000584878 AVPP01185 164 aa10.41□□□□□ -0.74
NLK-206ENST00000584878 VARSP26640 1264 aaKnown RBP10.41□□□□□ -0.74
NLK-206ENST00000584878 DACH1Q9UI36 760 aa10.41□□□□□ -0.74
NLK-206ENST00000584878 ARMC2Q8NEN0 867 aa10.4□□□□□ -0.74
NLK-206ENST00000584878 MAGEB6P1A0A0J9YX57 407 aa10.39□□□□□ -0.75
NLK-206ENST00000584878 NBPF14Q5TI25 921 aa10.39□□□□□ -0.75
NLK-206ENST00000584878 CARD14Q9BXL6 1004 aa10.39□□□□□ -0.75
NLK-206ENST00000584878 FKBPLQ9UIM3 349 aa10.39□□□□□ -0.75
NLK-206ENST00000584878 AXIN1O15169 862 aa10.38□□□□□ -0.75
NLK-206ENST00000584878 ARID5BQ14865 1188 aa10.38□□□□□ -0.75
NLK-206ENST00000584878 SH3BP5LQ7L8J4 393 aa10.38□□□□□ -0.75
NLK-206ENST00000584878 BPHLQ86WA6 291 aaPredicted RBP10.38□□□□□ -0.75
NLK-206ENST00000584878 FAM174AQ8TBP5 190 aa10.38□□□□□ -0.75
NLK-206ENST00000584878 WASF2Q9Y6W5 498 aa10.38□□□□□ -0.75
NLK-206ENST00000584878 POTECB2RU33 542 aa10.37□□□□□ -0.75
NLK-206ENST00000584878 SH3RF1Q7Z6J0 888 aa10.37□□□□□ -0.75
NLK-206ENST00000584878 TMEM259Q4ZIN3 620 aa10.36□□□□□ -0.75
NLK-206ENST00000584878 CRIPAKQ8N1N5 446 aa10.36□□□□□ -0.75
NLK-206ENST00000584878 TRIM34Q9BYJ4 488 aa10.35□□□□□ -0.75
NLK-206ENST00000584878 CTC1Q2NKJ3 1217 aa10.34□□□□□ -0.75
NLK-206ENST00000584878 ZNF787Q6DD87 383 aa10.34□□□□□ -0.75
NLK-206ENST00000584878 SMCPP49901 116 aaPredicted RBP10.33□□□□□ -0.76
NLK-206ENST00000584878 NNTQ13423 1086 aa10.33□□□□□ -0.76
NLK-206ENST00000584878 GPKOWQ92917 476 aaPredicted RBP eCLIP10.33□□□□□ -0.76
NLK-206ENST00000584878 C1QTNF2Q9BXJ5 285 aa10.33□□□□□ -0.76
NLK-206ENST00000584878 PDXDC2PQ6P474 469 aa10.32□□□□□ -0.76
NLK-206ENST00000584878 GJD4Q96KN9 370 aaPredicted RBP10.32□□□□□ -0.76
NLK-206ENST00000584878 OCSTAMPQ9BR26 566 aa10.32□□□□□ -0.76
NLK-206ENST00000584878 ARHGAP9Q9BRR9 750 aa10.32□□□□□ -0.76
NLK-206ENST00000584878 ADH1CP00326 375 aa10.31□□□□□ -0.76
NLK-206ENST00000584878 ERFEQ4G0M1 354 aa10.31□□□□□ -0.76
NLK-206ENST00000584878 MPNDQ8N594 471 aa10.31□□□□□ -0.76
NLK-206ENST00000584878 CDK15Q96Q40 435 aa10.31□□□□□ -0.76
NLK-206ENST00000584878 SNRKQ9NRH2 765 aa10.31□□□□□ -0.76
NLK-206ENST00000584878 GMPR2Q9P2T1 348 aaKnown RBP10.31□□□□□ -0.76
NLK-206ENST00000584878 NR3C2P08235 984 aa10.3□□□□□ -0.76
NLK-206ENST00000584878 FSHRP23945 695 aa10.29□□□□□ -0.76
NLK-206ENST00000584878 GRM5P41594 1212 aa10.29□□□□□ -0.76
NLK-206ENST00000584878 MTMR14Q8NCE2 650 aa10.29□□□□□ -0.76
NLK-206ENST00000584878 ZC3H4Q9UPT8 1303 aaKnown RBP10.29□□□□□ -0.76
NLK-206ENST00000584878 BMP1P13497 986 aa10.28□□□□□ -0.76
NLK-206ENST00000584878 TRMT44Q8IYL2 757 aaKnown RBP10.28□□□□□ -0.76
NLK-206ENST00000584878 ATP13A2Q9NQ11 1180 aa10.28□□□□□ -0.76
NLK-206ENST00000584878 CAPN5O15484 640 aaPredicted RBP10.27□□□□□ -0.77
NLK-206ENST00000584878 PTK2Q05397 1052 aa10.27□□□□□ -0.77
NLK-206ENST00000584878 VASH1Q7L8A9 365 aaPredicted RBP10.27□□□□□ -0.77
NLK-206ENST00000584878 ZBTB33Q86T24 672 aa10.27□□□□□ -0.77
NLK-206ENST00000584878 ADAM32Q8TC27 787 aa10.27□□□□□ -0.77
NLK-206ENST00000584878 WDR4P57081 412 aaKnown RBP10.26□□□□□ -0.77
NLK-206ENST00000584878 BANK1Q8NDB2 785 aa10.26□□□□□ -0.77
NLK-206ENST00000584878 TIMP2P16035 220 aa10.25□□□□□ -0.77
NLK-206ENST00000584878 PNMA1Q8ND90 353 aa10.25□□□□□ -0.77
NLK-206ENST00000584878 SLC10A4Q96EP9 437 aa10.25□□□□□ -0.77
NLK-206ENST00000584878 ZFAND3Q9H8U3 227 aa10.25□□□□□ -0.77
NLK-206ENST00000584878 TRIM46Q7Z4K8 759 aa10.24□□□□□ -0.77
NLK-206ENST00000584878 KLF16Q9BXK1 252 aaPredicted RBP10.24□□□□□ -0.77
NLK-206ENST00000584878 MAP4K5Q9Y4K4 846 aa10.24□□□□□ -0.77
NLK-206ENST00000584878 GPR37L1O60883 481 aa10.23□□□□□ -0.77
NLK-206ENST00000584878 NR5A1Q13285 461 aa10.23□□□□□ -0.77
NLK-206ENST00000584878 ITPKCQ96DU7 683 aa10.23□□□□□ -0.77
NLK-206ENST00000584878 ZIC2O95409 532 aaPredicted RBP10.22□□□□□ -0.77
NLK-206ENST00000584878 GPSM3Q9Y4H4 160 aa10.22□□□□□ -0.77
NLK-206ENST00000584878 C11orf95C9JLR9 678 aaPredicted RBP10.21□□□□□ -0.77
NLK-206ENST00000584878 KCTD15Q96SI1 283 aaPredicted RBP10.21□□□□□ -0.77
NLK-206ENST00000584878 FBXO45P0C2W1 286 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms