RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 ACEP12821 1306 aa25.84■■□□□ 1.73
SRSF1-208ENST00000584773 UNC5CLQ8IV45 518 aa25.84■■□□□ 1.73
SRSF1-208ENST00000584773 CCDC61Q9Y6R9 512 aa25.84■■□□□ 1.73
SRSF1-208ENST00000584773 POLR3AO14802 1390 aaPredicted RBP25.83■■□□□ 1.73
SRSF1-208ENST00000584773 GLI3P10071 1580 aa25.82■■□□□ 1.72
SRSF1-208ENST00000584773 PPIP5K1Q6PFW1 1433 aa25.81■■□□□ 1.72
SRSF1-208ENST00000584773 FAM83GA6ND36 823 aa25.81■■□□□ 1.72
SRSF1-208ENST00000584773 GJD4Q96KN9 370 aaPredicted RBP25.81■■□□□ 1.72
SRSF1-208ENST00000584773 RALGAPBQ86X10 1494 aa25.8■■□□□ 1.72
SRSF1-208ENST00000584773 PLEKHG3A1L390 1219 aa25.8■■□□□ 1.72
SRSF1-208ENST00000584773 NUTM2GQ5VZR2 741 aa25.8■■□□□ 1.72
SRSF1-208ENST00000584773 NWD2Q9ULI1 1742 aa25.8■■□□□ 1.72
SRSF1-208ENST00000584773 TONSLQ96HA7 1378 aa25.8■■□□□ 1.72
SRSF1-208ENST00000584773 PHRF1Q9P1Y6 1649 aaKnown RBP25.78■■□□□ 1.72
SRSF1-208ENST00000584773 NRAPQ86VF7 1730 aa25.77■■□□□ 1.72
SRSF1-208ENST00000584773 COL14A1Q05707 1796 aaKnown RBP25.74■■□□□ 1.71
SRSF1-208ENST00000584773 CABP1Q9NZU7 370 aa25.73■■□□□ 1.71
SRSF1-208ENST00000584773 EVC2Q86UK5 1308 aa25.72■■□□□ 1.71
SRSF1-208ENST00000584773 VPS72Q15906 364 aa25.72■■□□□ 1.71
SRSF1-208ENST00000584773 CARD11Q9BXL7 1154 aa25.72■■□□□ 1.71
SRSF1-208ENST00000584773 BTG4Q9NY30 223 aa25.72■■□□□ 1.71
SRSF1-208ENST00000584773 CCDC9Q9Y3X0 531 aaKnown RBP25.72■■□□□ 1.71
SRSF1-208ENST00000584773 BRWD3Q6RI45 1802 aa25.71■■□□□ 1.71
SRSF1-208ENST00000584773 KIAA0232Q92628 1395 aa25.7■■□□□ 1.7
SRSF1-208ENST00000584773 NRKQ7Z2Y5 1582 aa25.69■■□□□ 1.7
SRSF1-208ENST00000584773 ATAD2Q6PL18 1390 aa25.69■■□□□ 1.7
SRSF1-208ENST00000584773 CHRNA2Q15822 529 aa25.68■■□□□ 1.7
SRSF1-208ENST00000584773 ABTB2Q8N961 1025 aa25.68■■□□□ 1.7
SRSF1-208ENST00000584773 PRDM11Q9NQV5 511 aa25.68■■□□□ 1.7
SRSF1-208ENST00000584773 EP400Q96L91 3159 aa25.67■■□□□ 1.7
SRSF1-208ENST00000584773 ZC3H6P61129 1189 aaKnown RBP25.67■■□□□ 1.7
SRSF1-208ENST00000584773 USP6P35125 1406 aa25.67■■□□□ 1.7
SRSF1-208ENST00000584773 SEPT12Q8IYM1 358 aa25.63■■□□□ 1.69
SRSF1-208ENST00000584773 USP19O94966 1318 aa25.63■■□□□ 1.69
SRSF1-208ENST00000584773 AKAP12Q02952 1782 aa25.63■■□□□ 1.69
SRSF1-208ENST00000584773 PIK3C2AO00443 1686 aa25.61■■□□□ 1.69
SRSF1-208ENST00000584773 SSH2Q76I76 1423 aa25.61■■□□□ 1.69
SRSF1-208ENST00000584773 SBNO2Q9Y2G9 1366 aa25.6■■□□□ 1.69
SRSF1-208ENST00000584773 FAM98CQ17RN3 349 aaKnown RBP25.6■■□□□ 1.69
SRSF1-208ENST00000584773 STRN4Q9NRL3 753 aa25.59■■□□□ 1.69
SRSF1-208ENST00000584773 A0A0G2JS52 829 aa25.58■■□□□ 1.69
SRSF1-208ENST00000584773 ONECUT3O60422 494 aaPredicted RBP25.58■■□□□ 1.69
SRSF1-208ENST00000584773 MYT1Q01538 1121 aa25.58■■□□□ 1.69
SRSF1-208ENST00000584773 NLRP13Q86W25 1043 aa25.58■■□□□ 1.69
SRSF1-208ENST00000584773 PCGF6Q9BYE7 350 aa25.58■■□□□ 1.69
SRSF1-208ENST00000584773 SPATA31A5Q5VU36 1347 aa25.57■■□□□ 1.68
SRSF1-208ENST00000584773 SPATA31A7Q8IWB4 1347 aa25.57■■□□□ 1.68
SRSF1-208ENST00000584773 BRD4O60885 1362 aaPredicted RBP25.56■■□□□ 1.68
SRSF1-208ENST00000584773 LMO7Q8WWI1 1683 aa25.56■■□□□ 1.68
SRSF1-208ENST00000584773 GCP02774 474 aa25.56■■□□□ 1.68
SRSF1-208ENST00000584773 NLRP6P59044 892 aa25.56■■□□□ 1.68
SRSF1-208ENST00000584773 CAMTA1Q9Y6Y1 1673 aa25.56■■□□□ 1.68
SRSF1-208ENST00000584773 CPSF1Q10570 1443 aaKnown RBP25.55■■□□□ 1.68
SRSF1-208ENST00000584773 SLIT3O75094 1523 aa25.54■■□□□ 1.68
SRSF1-208ENST00000584773 ZBTB7CA1YPR0 619 aa25.54■■□□□ 1.68
SRSF1-208ENST00000584773 TTC21BQ7Z4L5 1316 aa25.54■■□□□ 1.68
SRSF1-208ENST00000584773 CPDO75976 1380 aa25.54■■□□□ 1.68
SRSF1-208ENST00000584773 MON2Q7Z3U7 1717 aa25.53■■□□□ 1.68
SRSF1-208ENST00000584773 KRT27Q7Z3Y8 459 aa25.52■■□□□ 1.68
SRSF1-208ENST00000584773 CD163L1Q9NR16 1453 aa25.52■■□□□ 1.68
SRSF1-208ENST00000584773 THSD7AQ9UPZ6 1657 aa25.52■■□□□ 1.68
SRSF1-208ENST00000584773 KTN1Q86UP2 1357 aaKnown RBP25.51■■□□□ 1.67
SRSF1-208ENST00000584773 SPATA31A1Q5TZJ5 1347 aa25.51■■□□□ 1.67
SRSF1-208ENST00000584773 ST20-MTHFSA0A0A6YYL1 179 aa25.51■■□□□ 1.67
SRSF1-208ENST00000584773 TMC1Q8TDI8 760 aa25.5■■□□□ 1.67
SRSF1-208ENST00000584773 TESK2Q96S53 571 aa25.5■■□□□ 1.67
SRSF1-208ENST00000584773 ZNF692Q9BU19 519 aaPredicted RBP25.5■■□□□ 1.67
SRSF1-208ENST00000584773 USP35Q9P2H5 1018 aa25.49■■□□□ 1.67
SRSF1-208ENST00000584773 SOX12O15370 315 aa25.48■■□□□ 1.67
SRSF1-208ENST00000584773 FAM182BQ5T319 152 aa25.48■■□□□ 1.67
SRSF1-208ENST00000584773 LARP1Q6PKG0 1096 aaKnown RBP25.48■■□□□ 1.67
SRSF1-208ENST00000584773 SLC12A5Q9H2X9 1139 aa25.48■■□□□ 1.67
SRSF1-208ENST00000584773 ZRANB1Q9UGI0 708 aa25.48■■□□□ 1.67
SRSF1-208ENST00000584773 EVA1CP58658 441 aa25.47■■□□□ 1.67
SRSF1-208ENST00000584773 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.46■■□□□ 1.67
SRSF1-208ENST00000584773 COL5A2P05997 1499 aaPredicted RBP25.46■■□□□ 1.67
SRSF1-208ENST00000584773 BLMP54132 1417 aaPredicted RBP25.45■■□□□ 1.66
SRSF1-208ENST00000584773 COL18A1P39060 1754 aa25.45■■□□□ 1.66
SRSF1-208ENST00000584773 TTC21AQ8NDW8 1320 aa25.45■■□□□ 1.66
SRSF1-208ENST00000584773 USP47Q96K76 1375 aa25.43■■□□□ 1.66
SRSF1-208ENST00000584773 DEFB132Q7Z7B7 95 aa25.42■■□□□ 1.66
SRSF1-208ENST00000584773 NME9Q86XW9 330 aa25.42■■□□□ 1.66
SRSF1-208ENST00000584773 RGPD5Q99666 1765 aa25.42■■□□□ 1.66
SRSF1-208ENST00000584773 CCDC125Q86Z20 511 aa25.41■■□□□ 1.66
SRSF1-208ENST00000584773 A0A1W2PP64 1363 aa25.41■■□□□ 1.66
SRSF1-208ENST00000584773 NFAT5O94916 1531 aa25.41■■□□□ 1.66
SRSF1-208ENST00000584773 AXIN2Q9Y2T1 843 aa25.4■■□□□ 1.66
SRSF1-208ENST00000584773 AATKQ6ZMQ8 1374 aa25.4■■□□□ 1.66
SRSF1-208ENST00000584773 HDGFL2Q7Z4V5 671 aaPredicted RBP25.38■■□□□ 1.65
SRSF1-208ENST00000584773 ARHGEF25Q86VW2 580 aa25.37■■□□□ 1.65
SRSF1-208ENST00000584773 USP54Q70EL1 1684 aa25.37■■□□□ 1.65
SRSF1-208ENST00000584773 TCP11L2Q8N4U5 519 aa25.37■■□□□ 1.65
SRSF1-208ENST00000584773 CLSPNQ9HAW4 1339 aa25.36■■□□□ 1.65
SRSF1-208ENST00000584773 USP31Q70CQ4 1352 aa25.36■■□□□ 1.65
SRSF1-208ENST00000584773 CRB1P82279 1406 aa25.36■■□□□ 1.65
SRSF1-208ENST00000584773 EDC4Q6P2E9 1401 aaKnown RBP25.36■■□□□ 1.65
SRSF1-208ENST00000584773 BARGINQ6ZT62 677 aa25.36■■□□□ 1.65
SRSF1-208ENST00000584773 KCNH5Q8NCM2 988 aa25.36■■□□□ 1.65
SRSF1-208ENST00000584773 PUS7Q96PZ0 661 aaKnown RBP25.36■■□□□ 1.65
SRSF1-208ENST00000584773 SF3B2Q13435 895 aaKnown RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms