RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 METP08581 1390 aa16.26■□□□□ 0.19
ITGB4-212ENST00000584558 TECPR2O15040 1411 aa16.26■□□□□ 0.19
ITGB4-212ENST00000584558 ATAD2Q6PL18 1390 aa16.26■□□□□ 0.19
ITGB4-212ENST00000584558 CPS1P31327 1500 aa16.25■□□□□ 0.19
ITGB4-212ENST00000584558 MINK1Q8N4C8 1332 aaPredicted RBP16.25■□□□□ 0.19
ITGB4-212ENST00000584558 BECN1Q14457 450 aa16.25■□□□□ 0.19
ITGB4-212ENST00000584558 A0A1W2PP64 1363 aa16.25■□□□□ 0.19
ITGB4-212ENST00000584558 POLR3AO14802 1390 aaPredicted RBP16.25■□□□□ 0.19
ITGB4-212ENST00000584558 PLEKHH1Q9ULM0 1364 aa16.25■□□□□ 0.19
ITGB4-212ENST00000584558 NSD2O96028 1365 aa16.24■□□□□ 0.19
ITGB4-212ENST00000584558 ANKRD26Q9UPS8 1709 aa16.24■□□□□ 0.19
ITGB4-212ENST00000584558 ADAMTS13Q76LX8 1427 aa16.23■□□□□ 0.19
ITGB4-212ENST00000584558 HSPA2P54652 639 aa16.23■□□□□ 0.19
ITGB4-212ENST00000584558 CGNL1Q0VF96 1302 aa16.23■□□□□ 0.19
ITGB4-212ENST00000584558 SLIT1O75093 1534 aa16.22■□□□□ 0.19
ITGB4-212ENST00000584558 ARHGAP23Q9P227 1491 aa16.22■□□□□ 0.19
ITGB4-212ENST00000584558 SRPK2P78362 688 aaKnown RBP16.22■□□□□ 0.19
ITGB4-212ENST00000584558 FAM135BQ49AJ0 1406 aa16.22■□□□□ 0.19
ITGB4-212ENST00000584558 HDGFP51858 240 aaKnown RBP16.21■□□□□ 0.19
ITGB4-212ENST00000584558 WDR43Q15061 677 aaKnown RBP eCLIP16.21■□□□□ 0.19
ITGB4-212ENST00000584558 MED14O60244 1454 aa16.21■□□□□ 0.19
ITGB4-212ENST00000584558 SIRT1Q96EB6 747 aa16.21■□□□□ 0.19
ITGB4-212ENST00000584558 CDK19Q9BWU1 502 aa16.21■□□□□ 0.19
ITGB4-212ENST00000584558 PLEKHG1Q9ULL1 1385 aa16.21■□□□□ 0.18
ITGB4-212ENST00000584558 WAPLQ7Z5K2 1190 aa16.2■□□□□ 0.18
ITGB4-212ENST00000584558 ADAMTSL3P82987 1691 aa16.2■□□□□ 0.18
ITGB4-212ENST00000584558 MORC1Q86VD1 984 aa16.2■□□□□ 0.18
ITGB4-212ENST00000584558 USP19O94966 1318 aa16.2■□□□□ 0.18
ITGB4-212ENST00000584558 ZNF521Q96K83 1311 aa16.19■□□□□ 0.18
ITGB4-212ENST00000584558 SEC24BO95487 1268 aa16.19■□□□□ 0.18
ITGB4-212ENST00000584558 FSD2A1L4K1 749 aa16.18■□□□□ 0.18
ITGB4-212ENST00000584558 LTKP29376 864 aa16.18■□□□□ 0.18
ITGB4-212ENST00000584558 SPRYD3Q8NCJ5 442 aa16.18■□□□□ 0.18
ITGB4-212ENST00000584558 KIF20BQ96Q89 1820 aa16.18■□□□□ 0.18
ITGB4-212ENST00000584558 ATP7BP35670 1465 aa16.17■□□□□ 0.18
ITGB4-212ENST00000584558 ESPNB1AK53 854 aa16.16■□□□□ 0.18
ITGB4-212ENST00000584558 ADGRB2O60241 1585 aa16.16■□□□□ 0.18
ITGB4-212ENST00000584558 A0A0U1RQG5 324 aaPredicted RBP16.16■□□□□ 0.18
ITGB4-212ENST00000584558 ANTXR1Q9H6X2 564 aa16.16■□□□□ 0.18
ITGB4-212ENST00000584558 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
ITGB4-212ENST00000584558 TERF2IPQ9NYB0 399 aa16.15■□□□□ 0.18
ITGB4-212ENST00000584558 ERBB4Q15303 1308 aa16.15■□□□□ 0.18
ITGB4-212ENST00000584558 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.14■□□□□ 0.17
ITGB4-212ENST00000584558 TXNDC2Q86VQ3 553 aa16.14■□□□□ 0.17
ITGB4-212ENST00000584558 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.17
ITGB4-212ENST00000584558 ROBO2Q9HCK4 1378 aa16.14■□□□□ 0.17
ITGB4-212ENST00000584558 CABP1Q9NZU7 370 aa16.13■□□□□ 0.17
ITGB4-212ENST00000584558 CPSF1Q10570 1443 aaKnown RBP16.13■□□□□ 0.17
ITGB4-212ENST00000584558 WASLO00401 505 aaPredicted RBP16.13■□□□□ 0.17
ITGB4-212ENST00000584558 MRE11P49959 708 aa16.13■□□□□ 0.17
ITGB4-212ENST00000584558 SLC26A8Q96RN1 970 aa16.13■□□□□ 0.17
ITGB4-212ENST00000584558 PDCL3Q9H2J4 239 aa16.13■□□□□ 0.17
ITGB4-212ENST00000584558 PTPRUQ92729 1446 aa16.13■□□□□ 0.17
ITGB4-212ENST00000584558 FYB1O15117 783 aa16.12■□□□□ 0.17
ITGB4-212ENST00000584558 MCM4P33991 863 aa16.12■□□□□ 0.17
ITGB4-212ENST00000584558 TRIM44Q96DX7 344 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-212ENST00000584558 COL3A1P02461 1466 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-212ENST00000584558 TNNT2P45379 298 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-212ENST00000584558 MTHFSP49914 203 aa16.12■□□□□ 0.17
ITGB4-212ENST00000584558 IQSEC2Q5JU85 1478 aa16.12■□□□□ 0.17
ITGB4-212ENST00000584558 MON2Q7Z3U7 1717 aa16.11■□□□□ 0.17
ITGB4-212ENST00000584558 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
ITGB4-212ENST00000584558 DIP2AQ14689 1571 aa16.11■□□□□ 0.17
ITGB4-212ENST00000584558 CDC42BPGQ6DT37 1551 aa16.11■□□□□ 0.17
ITGB4-212ENST00000584558 CCDC146Q8IYE0 955 aa16.11■□□□□ 0.17
ITGB4-212ENST00000584558 HDGFL2Q7Z4V5 671 aaPredicted RBP16.11■□□□□ 0.17
ITGB4-212ENST00000584558 TOPAZ1Q8N9V7 1692 aa16.11■□□□□ 0.17
ITGB4-212ENST00000584558 TPM2P07951 284 aa16.1■□□□□ 0.17
ITGB4-212ENST00000584558 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
ITGB4-212ENST00000584558 TRAK2O60296 914 aa16.1■□□□□ 0.17
ITGB4-212ENST00000584558 GRPEL1Q9HAV7 217 aa16.1■□□□□ 0.17
ITGB4-212ENST00000584558 CEP170BQ9Y4F5 1589 aaPredicted RBP16.1■□□□□ 0.17
ITGB4-212ENST00000584558 TBC1D2Q9BYX2 928 aa16.09■□□□□ 0.17
ITGB4-212ENST00000584558 GGNBP2Q9H3C7 697 aa16.09■□□□□ 0.17
ITGB4-212ENST00000584558 PPIP5K1Q6PFW1 1433 aa16.09■□□□□ 0.17
ITGB4-212ENST00000584558 RBM33Q96EV2 1170 aaKnown RBP16.09■□□□□ 0.17
ITGB4-212ENST00000584558 APAF1O14727 1248 aa16.09■□□□□ 0.17
ITGB4-212ENST00000584558 RBM10P98175 930 aaKnown RBP16.09■□□□□ 0.17
ITGB4-212ENST00000584558 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
ITGB4-212ENST00000584558 TRMT2AQ8IZ69 625 aaKnown RBP16.09■□□□□ 0.17
ITGB4-212ENST00000584558 NCKAP5LQ9HCH0 1330 aa16.08■□□□□ 0.17
ITGB4-212ENST00000584558 UPF2Q9HAU5 1272 aaKnown RBP16.08■□□□□ 0.16
ITGB4-212ENST00000584558 ZNF142P52746 1687 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-212ENST00000584558 IGHDP01880 384 aa16.08■□□□□ 0.16
ITGB4-212ENST00000584558 XRN1Q8IZH2 1706 aaKnown RBP16.07■□□□□ 0.16
ITGB4-212ENST00000584558 NGEFQ8N5V2 710 aa16.07■□□□□ 0.16
ITGB4-212ENST00000584558 EID1Q9Y6B2 187 aa16.07■□□□□ 0.16
ITGB4-212ENST00000584558 ITSN1Q15811 1721 aa16.07■□□□□ 0.16
ITGB4-212ENST00000584558 EDC4Q6P2E9 1401 aaKnown RBP16.07■□□□□ 0.16
ITGB4-212ENST00000584558 CALD1Q05682 793 aaKnown RBP16.06■□□□□ 0.16
ITGB4-212ENST00000584558 KIAA1211Q6ZU35 1233 aa16.06■□□□□ 0.16
ITGB4-212ENST00000584558 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
ITGB4-212ENST00000584558 SLFN5Q08AF3 891 aa16.06■□□□□ 0.16
ITGB4-212ENST00000584558 PTCH1Q13635 1447 aa16.06■□□□□ 0.16
ITGB4-212ENST00000584558 THEMISQ8N1K5 641 aaPredicted RBP16.06■□□□□ 0.16
ITGB4-212ENST00000584558 CFAP53Q96M91 514 aa16.06■□□□□ 0.16
ITGB4-212ENST00000584558 PRR36Q9H6K5 1346 aa16.06■□□□□ 0.16
ITGB4-212ENST00000584558 TBX22Q9Y458 520 aa16.06■□□□□ 0.16
ITGB4-212ENST00000584558 NUDT16Q96DE0 195 aaKnown RBP16.05■□□□□ 0.16
ITGB4-212ENST00000584558 NRKQ7Z2Y5 1582 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms