RNA–Protein interactions for RNA: ENST00000584527.1

SPECC1-223, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3 BASIC

Gene SPECC1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-223ENST00000584527 FAM83GA6ND36 823 aa21.96■■□□□ 1.11
SPECC1-223ENST00000584527 TOPAZ1Q8N9V7 1692 aa21.93■■□□□ 1.1
SPECC1-223ENST00000584527 SRCAPQ6ZRS2 3230 aa21.92■■□□□ 1.1
SPECC1-223ENST00000584527 KRT27Q7Z3Y8 459 aa21.91■■□□□ 1.1
SPECC1-223ENST00000584527 NGDNQ8NEJ9 315 aaKnown RBP21.91■■□□□ 1.1
SPECC1-223ENST00000584527 BTG4Q9NY30 223 aa21.91■■□□□ 1.1
SPECC1-223ENST00000584527 CCDC9Q9Y3X0 531 aaKnown RBP21.91■■□□□ 1.1
SPECC1-223ENST00000584527 POLR3AO14802 1390 aaPredicted RBP21.9■■□□□ 1.1
SPECC1-223ENST00000584527 PHRF1Q9P1Y6 1649 aaKnown RBP21.89■■□□□ 1.09
SPECC1-223ENST00000584527 PLEKHG5O94827 1062 aa21.89■■□□□ 1.09
SPECC1-223ENST00000584527 NUDT16Q96DE0 195 aaKnown RBP21.89■■□□□ 1.09
SPECC1-223ENST00000584527 THSD7AQ9UPZ6 1657 aa21.88■■□□□ 1.09
SPECC1-223ENST00000584527 SF3B2Q13435 895 aaKnown RBP21.88■■□□□ 1.09
SPECC1-223ENST00000584527 SPATA31A5Q5VU36 1347 aa21.86■■□□□ 1.09
SPECC1-223ENST00000584527 SPATA31A7Q8IWB4 1347 aa21.86■■□□□ 1.09
SPECC1-223ENST00000584527 PAK3O75914 559 aaPredicted RBP21.84■■□□□ 1.09
SPECC1-223ENST00000584527 FAM98CQ17RN3 349 aaKnown RBP21.84■■□□□ 1.09
SPECC1-223ENST00000584527 DEFB132Q7Z7B7 95 aa21.84■■□□□ 1.09
SPECC1-223ENST00000584527 CDK19Q9BWU1 502 aa21.84■■□□□ 1.09
SPECC1-223ENST00000584527 PRDM11Q9NQV5 511 aa21.84■■□□□ 1.09
SPECC1-223ENST00000584527 CCDC61Q9Y6R9 512 aa21.84■■□□□ 1.09
SPECC1-223ENST00000584527 PLEKHG3A1L390 1219 aa21.82■■□□□ 1.08
SPECC1-223ENST00000584527 RGPD1P0DJD0 1748 aa21.82■■□□□ 1.08
SPECC1-223ENST00000584527 KIAA0232Q92628 1395 aa21.82■■□□□ 1.08
SPECC1-223ENST00000584527 NRKQ7Z2Y5 1582 aa21.81■■□□□ 1.08
SPECC1-223ENST00000584527 ACEP12821 1306 aa21.8■■□□□ 1.08
SPECC1-223ENST00000584527 A0A0G2JS52 829 aa21.8■■□□□ 1.08
SPECC1-223ENST00000584527 MYT1Q01538 1121 aa21.8■■□□□ 1.08
SPECC1-223ENST00000584527 DISP2A7MBM2 1401 aa21.8■■□□□ 1.08
SPECC1-223ENST00000584527 BAG6P46379 1132 aa21.79■■□□□ 1.08
SPECC1-223ENST00000584527 LRP5O75197 1615 aa21.79■■□□□ 1.08
SPECC1-223ENST00000584527 BRD4O60885 1362 aaPredicted RBP21.78■■□□□ 1.08
SPECC1-223ENST00000584527 NBPF8Q3BBV2 869 aa21.78■■□□□ 1.08
SPECC1-223ENST00000584527 SPATA31A1Q5TZJ5 1347 aa21.78■■□□□ 1.08
SPECC1-223ENST00000584527 CPDO75976 1380 aa21.77■■□□□ 1.08
SPECC1-223ENST00000584527 USP19O94966 1318 aa21.77■■□□□ 1.07
SPECC1-223ENST00000584527 LMO7Q8WWI1 1683 aa21.76■■□□□ 1.07
SPECC1-223ENST00000584527 NBPF1Q3BBV0 1214 aa21.76■■□□□ 1.07
SPECC1-223ENST00000584527 CENPJQ9HC77 1338 aaPredicted RBP21.76■■□□□ 1.07
SPECC1-223ENST00000584527 TNS1Q9HBL0 1735 aaKnown RBP21.75■■□□□ 1.07
SPECC1-223ENST00000584527 SIN3AQ96ST3 1273 aa21.75■■□□□ 1.07
SPECC1-223ENST00000584527 PPIP5K1Q6PFW1 1433 aa21.74■■□□□ 1.07
SPECC1-223ENST00000584527 SSH2Q76I76 1423 aa21.74■■□□□ 1.07
SPECC1-223ENST00000584527 QRICH2Q9H0J4 1663 aa21.74■■□□□ 1.07
SPECC1-223ENST00000584527 NEUROD1Q13562 356 aa21.72■■□□□ 1.07
SPECC1-223ENST00000584527 CHRNA2Q15822 529 aa21.72■■□□□ 1.07
SPECC1-223ENST00000584527 ZC3H6P61129 1189 aaKnown RBP21.71■■□□□ 1.07
SPECC1-223ENST00000584527 BARGINQ6ZT62 677 aa21.71■■□□□ 1.07
SPECC1-223ENST00000584527 ABTB2Q8N961 1025 aa21.71■■□□□ 1.07
SPECC1-223ENST00000584527 CAMTA1Q9Y6Y1 1673 aa21.71■■□□□ 1.07
SPECC1-223ENST00000584527 CLSPNQ9HAW4 1339 aa21.71■■□□□ 1.07
SPECC1-223ENST00000584527 SRPK2P78362 688 aaKnown RBP21.69■■□□□ 1.06
SPECC1-223ENST00000584527 NUTM2GQ5VZR2 741 aa21.69■■□□□ 1.06
SPECC1-223ENST00000584527 STRN4Q9NRL3 753 aa21.69■■□□□ 1.06
SPECC1-223ENST00000584527 FAM196AQ6ZSG2 479 aa21.68■■□□□ 1.06
SPECC1-223ENST00000584527 NLRP13Q86W25 1043 aa21.68■■□□□ 1.06
SPECC1-223ENST00000584527 USP6P35125 1406 aa21.68■■□□□ 1.06
SPECC1-223ENST00000584527 TRPM1Q7Z4N2 1603 aa21.68■■□□□ 1.06
SPECC1-223ENST00000584527 SLIT3O75094 1523 aa21.67■■□□□ 1.06
SPECC1-223ENST00000584527 PARD3Q8TEW0 1356 aa21.67■■□□□ 1.06
SPECC1-223ENST00000584527 EN1Q05925 392 aaPredicted RBP21.66■■□□□ 1.06
SPECC1-223ENST00000584527 FAM182BQ5T319 152 aa21.66■■□□□ 1.06
SPECC1-223ENST00000584527 L3MBTL2Q969R5 705 aa21.66■■□□□ 1.06
SPECC1-223ENST00000584527 COL5A2P05997 1499 aaPredicted RBP21.65■■□□□ 1.06
SPECC1-223ENST00000584527 GCP02774 474 aa21.65■■□□□ 1.06
SPECC1-223ENST00000584527 CABP2Q9NPB3 220 aa21.65■■□□□ 1.06
SPECC1-223ENST00000584527 THRAP3Q9Y2W1 955 aaKnown RBP21.65■■□□□ 1.06
SPECC1-223ENST00000584527 PARP4Q9UKK3 1724 aaKnown RBP21.64■■□□□ 1.06
SPECC1-223ENST00000584527 EVA1CP58658 441 aa21.63■■□□□ 1.05
SPECC1-223ENST00000584527 TCP11L2Q8N4U5 519 aa21.63■■□□□ 1.05
SPECC1-223ENST00000584527 LARP1Q6PKG0 1096 aaKnown RBP21.62■■□□□ 1.05
SPECC1-223ENST00000584527 AATKQ6ZMQ8 1374 aa21.61■■□□□ 1.05
SPECC1-223ENST00000584527 TONSLQ96HA7 1378 aa21.61■■□□□ 1.05
SPECC1-223ENST00000584527 EVC2Q86UK5 1308 aa21.61■■□□□ 1.05
SPECC1-223ENST00000584527 PIK3C2AO00443 1686 aa21.61■■□□□ 1.05
SPECC1-223ENST00000584527 RREB1Q92766 1687 aa21.61■■□□□ 1.05
SPECC1-223ENST00000584527 CCER1Q8TC90 406 aaPredicted RBP21.61■■□□□ 1.05
SPECC1-223ENST00000584527 CRB1P82279 1406 aa21.61■■□□□ 1.05
SPECC1-223ENST00000584527 PSDA5PKW4 1024 aaPredicted RBP21.6■■□□□ 1.05
SPECC1-223ENST00000584527 CAMKK2Q96RR4 588 aa21.6■■□□□ 1.05
SPECC1-223ENST00000584527 CABP1Q9NZU7 370 aa21.6■■□□□ 1.05
SPECC1-223ENST00000584527 USP35Q9P2H5 1018 aa21.6■■□□□ 1.05
SPECC1-223ENST00000584527 TRIM37O94972 964 aa21.59■■□□□ 1.05
SPECC1-223ENST00000584527 PDE3BQ13370 1112 aa21.59■■□□□ 1.05
SPECC1-223ENST00000584527 C11orf95C9JLR9 678 aaPredicted RBP21.58■■□□□ 1.05
SPECC1-223ENST00000584527 EZH2Q15910 746 aaKnown RBP21.58■■□□□ 1.05
SPECC1-223ENST00000584527 COL18A1P39060 1754 aa21.57■■□□□ 1.04
SPECC1-223ENST00000584527 NLRP6P59044 892 aa21.57■■□□□ 1.04
SPECC1-223ENST00000584527 ROCK2O75116 1388 aaKnown RBP21.57■■□□□ 1.04
SPECC1-223ENST00000584527 AKAP12Q02952 1782 aa21.56■■□□□ 1.04
SPECC1-223ENST00000584527 PEAK1Q9H792 1746 aa21.55■■□□□ 1.04
SPECC1-223ENST00000584527 R3HDM1Q15032 1099 aaKnown RBP21.55■■□□□ 1.04
SPECC1-223ENST00000584527 ZNF692Q9BU19 519 aaPredicted RBP21.55■■□□□ 1.04
SPECC1-223ENST00000584527 TIMELESSQ9UNS1 1208 aa21.55■■□□□ 1.04
SPECC1-223ENST00000584527 SBNO2Q9Y2G9 1366 aa21.55■■□□□ 1.04
SPECC1-223ENST00000584527 NUP188Q5SRE5 1749 aa21.55■■□□□ 1.04
SPECC1-223ENST00000584527 LRRC37A3O60309 1634 aa21.55■■□□□ 1.04
SPECC1-223ENST00000584527 CPSF1Q10570 1443 aaKnown RBP21.55■■□□□ 1.04
SPECC1-223ENST00000584527 APBA3O96018 575 aa21.54■■□□□ 1.04
SPECC1-223ENST00000584527 RGPD3A6NKT7 1758 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms