RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 CABP1Q9NZU7 370 aa38.38■■■■□ 3.73
SMARCD2-210ENST00000584400 ATAD2Q6PL18 1390 aa38.37■■■■□ 3.73
SMARCD2-210ENST00000584400 BRD4O60885 1362 aaPredicted RBP38.35■■■■□ 3.73
SMARCD2-210ENST00000584400 PLEKHG5O94827 1062 aa38.35■■■■□ 3.73
SMARCD2-210ENST00000584400 TRPC5Q9UL62 973 aaPredicted RBP38.33■■■■□ 3.73
SMARCD2-210ENST00000584400 ALS2Q96Q42 1657 aa38.32■■■■□ 3.72
SMARCD2-210ENST00000584400 RBM6P78332 1123 aaKnown RBP38.31■■■■□ 3.72
SMARCD2-210ENST00000584400 ZNF692Q9BU19 519 aaPredicted RBP38.28■■■■□ 3.72
SMARCD2-210ENST00000584400 MARF1Q9Y4F3 1742 aaKnown RBP38.28■■■■□ 3.72
SMARCD2-210ENST00000584400 ST20-MTHFSA0A0A6YYL1 179 aa38.27■■■■□ 3.72
SMARCD2-210ENST00000584400 ABTB2Q8N961 1025 aa38.26■■■■□ 3.72
SMARCD2-210ENST00000584400 PUS7Q96PZ0 661 aaKnown RBP38.25■■■■□ 3.71
SMARCD2-210ENST00000584400 CDK12Q9NYV4 1490 aaPredicted RBP38.24■■■■□ 3.71
SMARCD2-210ENST00000584400 BCL9LQ86UU0 1499 aa38.23■■■■□ 3.71
SMARCD2-210ENST00000584400 UNC5CLQ8IV45 518 aa38.23■■■■□ 3.71
SMARCD2-210ENST00000584400 USP6P35125 1406 aa38.22■■■■□ 3.71
SMARCD2-210ENST00000584400 SLIT2O94813 1529 aa38.22■■■■□ 3.71
SMARCD2-210ENST00000584400 USP47Q96K76 1375 aa38.21■■■■□ 3.71
SMARCD2-210ENST00000584400 NLRP13Q86W25 1043 aa38.2■■■■□ 3.71
SMARCD2-210ENST00000584400 ATRNO75882 1429 aa38.2■■■■□ 3.71
SMARCD2-210ENST00000584400 ABCA3Q99758 1704 aa38.19■■■■□ 3.7
SMARCD2-210ENST00000584400 TESK2Q96S53 571 aa38.19■■■■□ 3.7
SMARCD2-210ENST00000584400 NUTM2GQ5VZR2 741 aa38.18■■■■□ 3.7
SMARCD2-210ENST00000584400 FAM83GA6ND36 823 aa38.16■■■■□ 3.7
SMARCD2-210ENST00000584400 TMC1Q8TDI8 760 aa38.15■■■■□ 3.7
SMARCD2-210ENST00000584400 TMF1P82094 1093 aa38.13■■■■□ 3.69
SMARCD2-210ENST00000584400 GJD4Q96KN9 370 aaPredicted RBP38.13■■■■□ 3.69
SMARCD2-210ENST00000584400 PRDM11Q9NQV5 511 aa38.13■■■■□ 3.69
SMARCD2-210ENST00000584400 CPSF1Q10570 1443 aaKnown RBP38.12■■■■□ 3.69
SMARCD2-210ENST00000584400 SSH2Q76I76 1423 aa38.11■■■■□ 3.69
SMARCD2-210ENST00000584400 KTN1Q86UP2 1357 aaKnown RBP38.1■■■■□ 3.69
SMARCD2-210ENST00000584400 HDGFL2Q7Z4V5 671 aaPredicted RBP38.1■■■■□ 3.69
SMARCD2-210ENST00000584400 TTC21AQ8NDW8 1320 aa38.1■■■■□ 3.69
SMARCD2-210ENST00000584400 NLRP6P59044 892 aa38.09■■■■□ 3.69
SMARCD2-210ENST00000584400 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.09■■■■□ 3.69
SMARCD2-210ENST00000584400 USP19O94966 1318 aa38.09■■■■□ 3.69
SMARCD2-210ENST00000584400 NINLQ9Y2I6 1382 aa38.08■■■■□ 3.69
SMARCD2-210ENST00000584400 BTG4Q9NY30 223 aa38.08■■■■□ 3.69
SMARCD2-210ENST00000584400 TERF2IPQ9NYB0 399 aa38.08■■■■□ 3.69
SMARCD2-210ENST00000584400 TTC21BQ7Z4L5 1316 aa38.08■■■■□ 3.69
SMARCD2-210ENST00000584400 VPS72Q15906 364 aa38.07■■■■□ 3.68
SMARCD2-210ENST00000584400 CDCA8Q53HL2 280 aa38.07■■■■□ 3.68
SMARCD2-210ENST00000584400 CRYBG1Q9Y4K1 1723 aa38.07■■■■□ 3.68
SMARCD2-210ENST00000584400 NWD2Q9ULI1 1742 aa38.06■■■■□ 3.68
SMARCD2-210ENST00000584400 KIAA0232Q92628 1395 aa38.06■■■■□ 3.68
SMARCD2-210ENST00000584400 RGS12O14924 1447 aa38.05■■■■□ 3.68
SMARCD2-210ENST00000584400 SLC12A5Q9H2X9 1139 aa38.05■■■■□ 3.68
SMARCD2-210ENST00000584400 COL14A1Q05707 1796 aaKnown RBP38.05■■■■□ 3.68
SMARCD2-210ENST00000584400 ZC3H6P61129 1189 aaKnown RBP38.04■■■■□ 3.68
SMARCD2-210ENST00000584400 CCDC9Q9Y3X0 531 aaKnown RBP38.04■■■■□ 3.68
SMARCD2-210ENST00000584400 PHRF1Q9P1Y6 1649 aaKnown RBP38.03■■■■□ 3.68
SMARCD2-210ENST00000584400 GCP02774 474 aa38.03■■■■□ 3.68
SMARCD2-210ENST00000584400 PLCH1Q4KWH8 1693 aa38.02■■■■□ 3.68
SMARCD2-210ENST00000584400 AKAP12Q02952 1782 aa38.01■■■■□ 3.67
SMARCD2-210ENST00000584400 CPDO75976 1380 aa38■■■■□ 3.67
SMARCD2-210ENST00000584400 NRKQ7Z2Y5 1582 aa37.97■■■■□ 3.67
SMARCD2-210ENST00000584400 CHRNA2Q15822 529 aa37.96■■■■□ 3.67
SMARCD2-210ENST00000584400 KCNH5Q8NCM2 988 aa37.96■■■■□ 3.67
SMARCD2-210ENST00000584400 CD163L1Q9NR16 1453 aa37.96■■■■□ 3.67
SMARCD2-210ENST00000584400 EIF4G2P78344 907 aaKnown RBP eCLIP37.93■■■■□ 3.66
SMARCD2-210ENST00000584400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.93■■■■□ 3.66
SMARCD2-210ENST00000584400 EDC4Q6P2E9 1401 aaKnown RBP37.93■■■■□ 3.66
SMARCD2-210ENST00000584400 A0A1W2PP64 1363 aa37.93■■■■□ 3.66
SMARCD2-210ENST00000584400 PIK3C2AO00443 1686 aa37.92■■■■□ 3.66
SMARCD2-210ENST00000584400 MON2Q7Z3U7 1717 aa37.91■■■■□ 3.66
SMARCD2-210ENST00000584400 SLIT3O75094 1523 aa37.91■■■■□ 3.66
SMARCD2-210ENST00000584400 EVA1CP58658 441 aa37.9■■■■□ 3.66
SMARCD2-210ENST00000584400 GLI3P10071 1580 aa37.89■■■■□ 3.66
SMARCD2-210ENST00000584400 NRAPQ86VF7 1730 aa37.88■■■■□ 3.65
SMARCD2-210ENST00000584400 STRN4Q9NRL3 753 aa37.87■■■■□ 3.65
SMARCD2-210ENST00000584400 USP31Q70CQ4 1352 aa37.87■■■■□ 3.65
SMARCD2-210ENST00000584400 ONECUT3O60422 494 aaPredicted RBP37.86■■■■□ 3.65
SMARCD2-210ENST00000584400 ANKRD36BQ8N2N9 1353 aa37.85■■■■□ 3.65
SMARCD2-210ENST00000584400 SPATA31A5Q5VU36 1347 aa37.85■■■■□ 3.65
SMARCD2-210ENST00000584400 SPATA31A7Q8IWB4 1347 aa37.85■■■■□ 3.65
SMARCD2-210ENST00000584400 ZBTB7CA1YPR0 619 aa37.83■■■■□ 3.65
SMARCD2-210ENST00000584400 NME9Q86XW9 330 aa37.83■■■■□ 3.65
SMARCD2-210ENST00000584400 SEPT12Q8IYM1 358 aa37.83■■■■□ 3.65
SMARCD2-210ENST00000584400 UPF1Q92900 1129 aaKnown RBP eCLIP37.83■■■■□ 3.65
SMARCD2-210ENST00000584400 AATKQ6ZMQ8 1374 aa37.82■■■■□ 3.65
SMARCD2-210ENST00000584400 A0A0G2JS52 829 aa37.8■■■■□ 3.64
SMARCD2-210ENST00000584400 MYT1Q01538 1121 aa37.8■■■■□ 3.64
SMARCD2-210ENST00000584400 SOX12O15370 315 aa37.78■■■■□ 3.64
SMARCD2-210ENST00000584400 HSPA5P11021 654 aaKnown RBP37.78■■■■□ 3.64
SMARCD2-210ENST00000584400 FAM98CQ17RN3 349 aaKnown RBP37.78■■■■□ 3.64
SMARCD2-210ENST00000584400 ARHGEF25Q86VW2 580 aa37.78■■■■□ 3.64
SMARCD2-210ENST00000584400 CAMTA1Q9Y6Y1 1673 aa37.77■■■■□ 3.64
SMARCD2-210ENST00000584400 SPATA31A1Q5TZJ5 1347 aa37.77■■■■□ 3.64
SMARCD2-210ENST00000584400 ZRANB1Q9UGI0 708 aa37.75■■■■□ 3.63
SMARCD2-210ENST00000584400 LMO7Q8WWI1 1683 aa37.75■■■■□ 3.63
SMARCD2-210ENST00000584400 COL5A2P05997 1499 aaPredicted RBP37.71■■■■□ 3.63
SMARCD2-210ENST00000584400 LARP1Q6PKG0 1096 aaKnown RBP37.71■■■■□ 3.63
SMARCD2-210ENST00000584400 COG3Q96JB2 828 aa37.71■■■■□ 3.63
SMARCD2-210ENST00000584400 KRT27Q7Z3Y8 459 aa37.7■■■■□ 3.63
SMARCD2-210ENST00000584400 USP54Q70EL1 1684 aa37.69■■■■□ 3.62
SMARCD2-210ENST00000584400 USP35Q9P2H5 1018 aa37.69■■■■□ 3.62
SMARCD2-210ENST00000584400 NFAT5O94916 1531 aa37.68■■■■□ 3.62
SMARCD2-210ENST00000584400 THRAP3Q9Y2W1 955 aaKnown RBP37.68■■■■□ 3.62
SMARCD2-210ENST00000584400 OVOS2A0A0J9YW53 1432 aa37.68■■■■□ 3.62
SMARCD2-210ENST00000584400 OVOS2Q6IE36 1432 aa37.68■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms