RNA–Protein interactions for RNA: ENST00000584336.1

CDK12-208, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 1,963 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-208ENST00000584336 ANKRD26Q9UPS8 1709 aa13.89□□□□□ -0.19
CDK12-208ENST00000584336 EDC4Q6P2E9 1401 aaKnown RBP13.89□□□□□ -0.19
CDK12-208ENST00000584336 MON2Q7Z3U7 1717 aa13.88□□□□□ -0.19
CDK12-208ENST00000584336 NALCNQ8IZF0 1738 aa13.88□□□□□ -0.19
CDK12-208ENST00000584336 APAF1O14727 1248 aa13.87□□□□□ -0.19
CDK12-208ENST00000584336 NUDCQ9Y266 331 aa13.87□□□□□ -0.19
CDK12-208ENST00000584336 TTC21BQ7Z4L5 1316 aa13.87□□□□□ -0.19
CDK12-208ENST00000584336 ITSN1Q15811 1721 aa13.87□□□□□ -0.19
CDK12-208ENST00000584336 SMG6Q86US8 1419 aaKnown RBP13.87□□□□□ -0.19
CDK12-208ENST00000584336 IQSEC2Q5JU85 1478 aa13.86□□□□□ -0.19
CDK12-208ENST00000584336 PPM1GO15355 546 aaPredicted RBP13.86□□□□□ -0.19
CDK12-208ENST00000584336 FBXO41Q8TF61 875 aa13.86□□□□□ -0.19
CDK12-208ENST00000584336 POLKQ9UBT6 870 aa13.86□□□□□ -0.19
CDK12-208ENST00000584336 EMILIN1Q9Y6C2 1016 aa13.86□□□□□ -0.19
CDK12-208ENST00000584336 RRS1Q15050 365 aaKnown RBP13.85□□□□□ -0.19
CDK12-208ENST00000584336 INSRP06213 1382 aa13.85□□□□□ -0.19
CDK12-208ENST00000584336 COL3A1P02461 1466 aaPredicted RBP13.85□□□□□ -0.19
CDK12-208ENST00000584336 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
CDK12-208ENST00000584336 STRCP1A6NGW2 1772 aa13.85□□□□□ -0.19
CDK12-208ENST00000584336 USP6P35125 1406 aa13.85□□□□□ -0.19
CDK12-208ENST00000584336 NRKQ7Z2Y5 1582 aa13.84□□□□□ -0.19
CDK12-208ENST00000584336 FMN2Q9NZ56 1722 aa13.84□□□□□ -0.19
CDK12-208ENST00000584336 ILDR1Q86SU0 546 aaPredicted RBP13.84□□□□□ -0.19
CDK12-208ENST00000584336 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
CDK12-208ENST00000584336 NGDNQ8NEJ9 315 aaKnown RBP13.83□□□□□ -0.19
CDK12-208ENST00000584336 CFAP53Q96M91 514 aa13.83□□□□□ -0.19
CDK12-208ENST00000584336 SOX12O15370 315 aa13.83□□□□□ -0.2
CDK12-208ENST00000584336 SSH2Q76I76 1423 aa13.83□□□□□ -0.2
CDK12-208ENST00000584336 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
CDK12-208ENST00000584336 U2SURPO15042 1029 aaKnown RBP13.82□□□□□ -0.2
CDK12-208ENST00000584336 U2AF1L5P0DN76 240 aaPredicted RBP13.82□□□□□ -0.2
CDK12-208ENST00000584336 U2AF1Q01081 240 aaKnown RBP eCLIP13.82□□□□□ -0.2
CDK12-208ENST00000584336 NEUROD2Q15784 382 aa13.82□□□□□ -0.2
CDK12-208ENST00000584336 NUTM2GQ5VZR2 741 aa13.82□□□□□ -0.2
CDK12-208ENST00000584336 PROSER2Q86WR7 435 aaPredicted RBP13.82□□□□□ -0.2
CDK12-208ENST00000584336 COG3Q96JB2 828 aa13.82□□□□□ -0.2
CDK12-208ENST00000584336 C14orf37Q86TY3 774 aa13.82□□□□□ -0.2
CDK12-208ENST00000584336 ZNF521Q96K83 1311 aa13.81□□□□□ -0.2
CDK12-208ENST00000584336 POTEDQ86YR6 584 aa13.81□□□□□ -0.2
CDK12-208ENST00000584336 MAP2P11137 1827 aaKnown RBP13.81□□□□□ -0.2
CDK12-208ENST00000584336 ORAI2Q96SN7 254 aa13.8□□□□□ -0.2
CDK12-208ENST00000584336 NWD1Q149M9 1564 aa13.8□□□□□ -0.2
CDK12-208ENST00000584336 LRRC7Q96NW7 1537 aa13.8□□□□□ -0.2
CDK12-208ENST00000584336 ADGRL3Q9HAR2 1447 aa13.8□□□□□ -0.2
CDK12-208ENST00000584336 PNPLA6Q8IY17 1366 aa13.79□□□□□ -0.2
CDK12-208ENST00000584336 DIAPH1O60610 1272 aaKnown RBP13.79□□□□□ -0.2
CDK12-208ENST00000584336 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
CDK12-208ENST00000584336 RUNDC1Q96C34 613 aa13.79□□□□□ -0.2
CDK12-208ENST00000584336 ANKARQ7Z5J8 1434 aa13.79□□□□□ -0.2
CDK12-208ENST00000584336 ESCO1Q5FWF5 840 aa13.78□□□□□ -0.2
CDK12-208ENST00000584336 PHF8Q9UPP1 1060 aa13.78□□□□□ -0.2
CDK12-208ENST00000584336 OVOS2A0A0J9YW53 1432 aa13.78□□□□□ -0.2
CDK12-208ENST00000584336 OVOS2Q6IE36 1432 aa13.78□□□□□ -0.2
CDK12-208ENST00000584336 NEFLP07196 543 aa13.78□□□□□ -0.2
CDK12-208ENST00000584336 XPCQ01831 940 aaPredicted RBP13.78□□□□□ -0.2
CDK12-208ENST00000584336 PLEKHF1Q96S99 279 aa13.78□□□□□ -0.2
CDK12-208ENST00000584336 PAK3O75914 559 aaPredicted RBP13.76□□□□□ -0.21
CDK12-208ENST00000584336 PDE3BQ13370 1112 aa13.76□□□□□ -0.21
CDK12-208ENST00000584336 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
CDK12-208ENST00000584336 HMOX1P09601 288 aa13.76□□□□□ -0.21
CDK12-208ENST00000584336 IL13P35225 146 aa13.76□□□□□ -0.21
CDK12-208ENST00000584336 DUSP27Q5VZP5 1158 aa13.76□□□□□ -0.21
CDK12-208ENST00000584336 AATKQ6ZMQ8 1374 aa13.76□□□□□ -0.21
CDK12-208ENST00000584336 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
CDK12-208ENST00000584336 PEAK1Q9H792 1746 aa13.75□□□□□ -0.21
CDK12-208ENST00000584336 TMEM94Q12767 1356 aa13.74□□□□□ -0.21
CDK12-208ENST00000584336 GOLGA2Q08379 1002 aa13.74□□□□□ -0.21
CDK12-208ENST00000584336 SLFN5Q08AF3 891 aa13.74□□□□□ -0.21
CDK12-208ENST00000584336 WWC1Q8IX03 1113 aa13.74□□□□□ -0.21
CDK12-208ENST00000584336 XIRP1Q702N8 1843 aaKnown RBP13.74□□□□□ -0.21
CDK12-208ENST00000584336 NLRP6P59044 892 aa13.74□□□□□ -0.21
CDK12-208ENST00000584336 DDX17Q92841 729 aaKnown RBP13.74□□□□□ -0.21
CDK12-208ENST00000584336 TTC21AQ8NDW8 1320 aa13.73□□□□□ -0.21
CDK12-208ENST00000584336 USP31Q70CQ4 1352 aa13.73□□□□□ -0.21
CDK12-208ENST00000584336 UBAP1LF5GYI3 381 aa13.73□□□□□ -0.21
CDK12-208ENST00000584336 FOXO3O43524 673 aa13.73□□□□□ -0.21
CDK12-208ENST00000584336 HSP90AB2PQ58FF8 381 aa13.73□□□□□ -0.21
CDK12-208ENST00000584336 ABTB2Q8N961 1025 aa13.72□□□□□ -0.21
CDK12-208ENST00000584336 RCAN3Q9UKA8 241 aa13.72□□□□□ -0.21
CDK12-208ENST00000584336 MARF1Q9Y4F3 1742 aaKnown RBP13.72□□□□□ -0.21
CDK12-208ENST00000584336 RNF123Q5XPI4 1314 aa13.72□□□□□ -0.21
CDK12-208ENST00000584336 PLIN1O60240 522 aa13.72□□□□□ -0.21
CDK12-208ENST00000584336 TRMT2AQ8IZ69 625 aaKnown RBP13.72□□□□□ -0.21
CDK12-208ENST00000584336 PHACTR3Q96KR7 559 aa13.72□□□□□ -0.21
CDK12-208ENST00000584336 RSPH6AQ9H0K4 717 aa13.72□□□□□ -0.21
CDK12-208ENST00000584336 MAP3K19Q56UN5 1328 aa13.72□□□□□ -0.21
CDK12-208ENST00000584336 TOM1O60784 492 aa13.71□□□□□ -0.21
CDK12-208ENST00000584336 PRKAR2BP31323 418 aa13.71□□□□□ -0.21
CDK12-208ENST00000584336 EIF4A2Q14240 407 aaKnown RBP13.71□□□□□ -0.21
CDK12-208ENST00000584336 CDK12Q9NYV4 1490 aaPredicted RBP13.71□□□□□ -0.21
CDK12-208ENST00000584336 PSME1Q06323 249 aa13.71□□□□□ -0.22
CDK12-208ENST00000584336 C19orf44Q9H6X5 657 aa13.71□□□□□ -0.22
CDK12-208ENST00000584336 NCOA3Q9Y6Q9 1424 aa13.7□□□□□ -0.22
CDK12-208ENST00000584336 C1orf167Q5SNV9 1468 aa13.7□□□□□ -0.22
CDK12-208ENST00000584336 TMPOP42166 694 aaKnown RBP13.7□□□□□ -0.22
CDK12-208ENST00000584336 AEBP1Q8IUX7 1158 aa13.7□□□□□ -0.22
CDK12-208ENST00000584336 PHF23Q9BUL5 403 aaPredicted RBP13.7□□□□□ -0.22
CDK12-208ENST00000584336 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
CDK12-208ENST00000584336 RRP1P56182 461 aaKnown RBP13.68□□□□□ -0.22
CDK12-208ENST00000584336 MST1RQ04912 1400 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms