RNA–Protein interactions for RNA: ENST00000584335.5

SNX11-213, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-213ENST00000584335 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
SNX11-213ENST00000584335 A0A1W2PP64 1363 aa12.71□□□□□ -0.37
SNX11-213ENST00000584335 TOPAZ1Q8N9V7 1692 aa12.71□□□□□ -0.37
SNX11-213ENST00000584335 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
SNX11-213ENST00000584335 TERF2IPQ9NYB0 399 aa12.71□□□□□ -0.37
SNX11-213ENST00000584335 AMOTL2Q9Y2J4 779 aa12.71□□□□□ -0.37
SNX11-213ENST00000584335 ANKRD26Q9UPS8 1709 aa12.71□□□□□ -0.38
SNX11-213ENST00000584335 NPHP4O75161 1426 aaPredicted RBP12.71□□□□□ -0.38
SNX11-213ENST00000584335 CGNL1Q0VF96 1302 aa12.7□□□□□ -0.38
SNX11-213ENST00000584335 CDC42BPGQ6DT37 1551 aa12.69□□□□□ -0.38
SNX11-213ENST00000584335 PPP2R1AP30153 589 aa12.69□□□□□ -0.38
SNX11-213ENST00000584335 VASPP50552 380 aaPredicted RBP12.69□□□□□ -0.38
SNX11-213ENST00000584335 CNGB1Q14028 1251 aaPredicted RBP12.69□□□□□ -0.38
SNX11-213ENST00000584335 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
SNX11-213ENST00000584335 CPSF1Q10570 1443 aaKnown RBP12.69□□□□□ -0.38
SNX11-213ENST00000584335 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
SNX11-213ENST00000584335 HDGFL2Q7Z4V5 671 aaPredicted RBP12.68□□□□□ -0.38
SNX11-213ENST00000584335 AKAP12Q02952 1782 aa12.68□□□□□ -0.38
SNX11-213ENST00000584335 PPIP5K1Q6PFW1 1433 aa12.67□□□□□ -0.38
SNX11-213ENST00000584335 ITSN1Q15811 1721 aa12.67□□□□□ -0.38
SNX11-213ENST00000584335 MON2Q7Z3U7 1717 aa12.67□□□□□ -0.38
SNX11-213ENST00000584335 KIF20BQ96Q89 1820 aa12.67□□□□□ -0.38
SNX11-213ENST00000584335 HNRNPUQ00839 825 aaKnown RBP eCLIP12.66□□□□□ -0.38
SNX11-213ENST00000584335 NUDT16Q96DE0 195 aaKnown RBP12.66□□□□□ -0.38
SNX11-213ENST00000584335 CABP1Q9NZU7 370 aa12.66□□□□□ -0.38
SNX11-213ENST00000584335 CCDC61Q9Y6R9 512 aa12.66□□□□□ -0.38
SNX11-213ENST00000584335 EDC4Q6P2E9 1401 aaKnown RBP12.65□□□□□ -0.38
SNX11-213ENST00000584335 HAX1O00165 279 aa12.65□□□□□ -0.38
SNX11-213ENST00000584335 FMN2Q9NZ56 1722 aa12.65□□□□□ -0.38
SNX11-213ENST00000584335 ZBED9Q6R2W3 1325 aa12.64□□□□□ -0.39
SNX11-213ENST00000584335 ANKARQ7Z5J8 1434 aa12.64□□□□□ -0.39
SNX11-213ENST00000584335 KCNA6P17658 529 aa12.64□□□□□ -0.39
SNX11-213ENST00000584335 MORC1Q86VD1 984 aa12.64□□□□□ -0.39
SNX11-213ENST00000584335 POLR3AO14802 1390 aaPredicted RBP12.64□□□□□ -0.39
SNX11-213ENST00000584335 PRR36Q9H6K5 1346 aa12.63□□□□□ -0.39
SNX11-213ENST00000584335 BLMP54132 1417 aaPredicted RBP12.63□□□□□ -0.39
SNX11-213ENST00000584335 NALCNQ8IZF0 1738 aa12.63□□□□□ -0.39
SNX11-213ENST00000584335 KDM4FA0A1W2PPD8 638 aa12.63□□□□□ -0.39
SNX11-213ENST00000584335 PLEKHG3A1L390 1219 aa12.63□□□□□ -0.39
SNX11-213ENST00000584335 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
SNX11-213ENST00000584335 NRKQ7Z2Y5 1582 aa12.63□□□□□ -0.39
SNX11-213ENST00000584335 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
SNX11-213ENST00000584335 NKTRP30414 1462 aaKnown RBP12.61□□□□□ -0.39
SNX11-213ENST00000584335 FYB1O15117 783 aa12.61□□□□□ -0.39
SNX11-213ENST00000584335 ADGRL3Q9HAR2 1447 aa12.6□□□□□ -0.39
SNX11-213ENST00000584335 LMTK3Q96Q04 1460 aa12.59□□□□□ -0.39
SNX11-213ENST00000584335 SHPRHQ149N8 1683 aa12.59□□□□□ -0.39
SNX11-213ENST00000584335 KLHL34Q8N239 644 aa12.58□□□□□ -0.4
SNX11-213ENST00000584335 USP6P35125 1406 aa12.57□□□□□ -0.4
SNX11-213ENST00000584335 SSH2Q76I76 1423 aa12.57□□□□□ -0.4
SNX11-213ENST00000584335 WDR43Q15061 677 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNX11-213ENST00000584335 ZBTB47Q9UFB7 747 aaPredicted RBP12.57□□□□□ -0.4
SNX11-213ENST00000584335 RGPD8O14715 1765 aaPredicted RBP12.56□□□□□ -0.4
SNX11-213ENST00000584335 NCOA3Q9Y6Q9 1424 aa12.56□□□□□ -0.4
SNX11-213ENST00000584335 GGNBP2Q9H3C7 697 aa12.56□□□□□ -0.4
SNX11-213ENST00000584335 ACEP12821 1306 aa12.56□□□□□ -0.4
SNX11-213ENST00000584335 CFAP53Q96M91 514 aa12.55□□□□□ -0.4
SNX11-213ENST00000584335 ADAMTS8Q9UP79 889 aa12.55□□□□□ -0.4
SNX11-213ENST00000584335 STRCQ7RTU9 1775 aa12.55□□□□□ -0.4
SNX11-213ENST00000584335 AATKQ6ZMQ8 1374 aa12.55□□□□□ -0.4
SNX11-213ENST00000584335 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
SNX11-213ENST00000584335 SMG6Q86US8 1419 aaKnown RBP12.54□□□□□ -0.4
SNX11-213ENST00000584335 COL3A1P02461 1466 aaPredicted RBP12.54□□□□□ -0.4
SNX11-213ENST00000584335 MTHFSP49914 203 aa12.54□□□□□ -0.4
SNX11-213ENST00000584335 TTC21AQ8NDW8 1320 aa12.54□□□□□ -0.4
SNX11-213ENST00000584335 PNPLA6Q8IY17 1366 aa12.54□□□□□ -0.4
SNX11-213ENST00000584335 C19orf67A6NJJ6 358 aa12.53□□□□□ -0.4
SNX11-213ENST00000584335 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
SNX11-213ENST00000584335 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
SNX11-213ENST00000584335 STRCP1A6NGW2 1772 aa12.53□□□□□ -0.4
SNX11-213ENST00000584335 OVOS2A0A0J9YW53 1432 aa12.53□□□□□ -0.4
SNX11-213ENST00000584335 OVOS2Q6IE36 1432 aa12.53□□□□□ -0.4
SNX11-213ENST00000584335 LRRC7Q96NW7 1537 aa12.52□□□□□ -0.4
SNX11-213ENST00000584335 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
SNX11-213ENST00000584335 TNNT2P45379 298 aaPredicted RBP12.52□□□□□ -0.41
SNX11-213ENST00000584335 IFNLR1Q8IU57 520 aaPredicted RBP12.52□□□□□ -0.41
SNX11-213ENST00000584335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNX11-213ENST00000584335 NGEFQ8N5V2 710 aa12.52□□□□□ -0.41
SNX11-213ENST00000584335 DCCP43146 1447 aa12.52□□□□□ -0.41
SNX11-213ENST00000584335 EVX2Q03828 476 aa12.51□□□□□ -0.41
SNX11-213ENST00000584335 PDE3BQ13370 1112 aa12.51□□□□□ -0.41
SNX11-213ENST00000584335 COG3Q96JB2 828 aa12.51□□□□□ -0.41
SNX11-213ENST00000584335 USP31Q70CQ4 1352 aa12.51□□□□□ -0.41
SNX11-213ENST00000584335 NME9Q86XW9 330 aa12.5□□□□□ -0.41
SNX11-213ENST00000584335 CDK12Q9NYV4 1490 aaPredicted RBP12.5□□□□□ -0.41
SNX11-213ENST00000584335 MAP2P11137 1827 aaKnown RBP12.49□□□□□ -0.41
SNX11-213ENST00000584335 PIK3C2AO00443 1686 aa12.49□□□□□ -0.41
SNX11-213ENST00000584335 KIF1AQ12756 1690 aa12.49□□□□□ -0.41
SNX11-213ENST00000584335 NUTM2FA1L443 756 aa12.49□□□□□ -0.41
SNX11-213ENST00000584335 HSPA2P54652 639 aa12.49□□□□□ -0.41
SNX11-213ENST00000584335 PROSER2Q86WR7 435 aaPredicted RBP12.49□□□□□ -0.41
SNX11-213ENST00000584335 NGDNQ8NEJ9 315 aaKnown RBP12.49□□□□□ -0.41
SNX11-213ENST00000584335 PMFBP1Q8TBY8 1022 aa12.48□□□□□ -0.41
SNX11-213ENST00000584335 C19orf44Q9H6X5 657 aa12.48□□□□□ -0.41
SNX11-213ENST00000584335 POLKQ9UBT6 870 aa12.48□□□□□ -0.41
SNX11-213ENST00000584335 PHF8Q9UPP1 1060 aa12.47□□□□□ -0.41
SNX11-213ENST00000584335 NUDCQ9Y266 331 aa12.47□□□□□ -0.41
SNX11-213ENST00000584335 IQSEC2Q5JU85 1478 aa12.46□□□□□ -0.41
SNX11-213ENST00000584335 MARF1Q9Y4F3 1742 aaKnown RBP12.46□□□□□ -0.41
SNX11-213ENST00000584335 ZNF521Q96K83 1311 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms