RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 USP21Q9UK80 565 aa14.13□□□□□ -0.15
SKA2-208ENST00000583927 PHRF1Q9P1Y6 1649 aaKnown RBP14.12□□□□□ -0.15
SKA2-208ENST00000583927 COL14A1Q05707 1796 aaKnown RBP14.12□□□□□ -0.15
SKA2-208ENST00000583927 TRPC5Q9UL62 973 aaPredicted RBP14.12□□□□□ -0.15
SKA2-208ENST00000583927 ACEP12821 1306 aa14.12□□□□□ -0.15
SKA2-208ENST00000583927 EVC2Q86UK5 1308 aa14.12□□□□□ -0.15
SKA2-208ENST00000583927 PPIP5K1Q6PFW1 1433 aa14.11□□□□□ -0.15
SKA2-208ENST00000583927 NRAPQ86VF7 1730 aa14.11□□□□□ -0.15
SKA2-208ENST00000583927 TIMELESSQ9UNS1 1208 aa14.11□□□□□ -0.15
SKA2-208ENST00000583927 SRPK2P78362 688 aaKnown RBP14.1□□□□□ -0.15
SKA2-208ENST00000583927 CARD11Q9BXL7 1154 aa14.09□□□□□ -0.15
SKA2-208ENST00000583927 RGS12O14924 1447 aa14.08□□□□□ -0.15
SKA2-208ENST00000583927 LMOD2Q6P5Q4 547 aa14.08□□□□□ -0.16
SKA2-208ENST00000583927 UNC5CLQ8IV45 518 aa14.08□□□□□ -0.16
SKA2-208ENST00000583927 CABP2Q9NPB3 220 aa14.08□□□□□ -0.16
SKA2-208ENST00000583927 ATAD2Q6PL18 1390 aa14.08□□□□□ -0.16
SKA2-208ENST00000583927 MON2Q7Z3U7 1717 aa14.07□□□□□ -0.16
SKA2-208ENST00000583927 HAP1P54257 671 aaPredicted RBP14.07□□□□□ -0.16
SKA2-208ENST00000583927 CABLES1Q8TDN4 633 aa14.07□□□□□ -0.16
SKA2-208ENST00000583927 GLI3P10071 1580 aa14.07□□□□□ -0.16
SKA2-208ENST00000583927 NRKQ7Z2Y5 1582 aa14.06□□□□□ -0.16
SKA2-208ENST00000583927 SLC24A1O60721 1099 aa14.06□□□□□ -0.16
SKA2-208ENST00000583927 PUS7Q96PZ0 661 aaKnown RBP14.06□□□□□ -0.16
SKA2-208ENST00000583927 BRWD3Q6RI45 1802 aa14.06□□□□□ -0.16
SKA2-208ENST00000583927 USP6P35125 1406 aa14.06□□□□□ -0.16
SKA2-208ENST00000583927 SSH2Q76I76 1423 aa14.06□□□□□ -0.16
SKA2-208ENST00000583927 PAK3O75914 559 aaPredicted RBP14.05□□□□□ -0.16
SKA2-208ENST00000583927 GJD4Q96KN9 370 aaPredicted RBP14.05□□□□□ -0.16
SKA2-208ENST00000583927 PIK3C2AO00443 1686 aa14.04□□□□□ -0.16
SKA2-208ENST00000583927 USP54Q70EL1 1684 aa14.04□□□□□ -0.16
SKA2-208ENST00000583927 FAM83GA6ND36 823 aa14.04□□□□□ -0.16
SKA2-208ENST00000583927 ZNF692Q9BU19 519 aaPredicted RBP14.04□□□□□ -0.16
SKA2-208ENST00000583927 CABP1Q9NZU7 370 aa14.04□□□□□ -0.16
SKA2-208ENST00000583927 USP19O94966 1318 aa14.04□□□□□ -0.16
SKA2-208ENST00000583927 CPSF1Q10570 1443 aaKnown RBP14.04□□□□□ -0.16
SKA2-208ENST00000583927 VPS72Q15906 364 aa14.03□□□□□ -0.16
SKA2-208ENST00000583927 LMO7Q8WWI1 1683 aa14.02□□□□□ -0.16
SKA2-208ENST00000583927 SLIT3O75094 1523 aa14.02□□□□□ -0.16
SKA2-208ENST00000583927 CPDO75976 1380 aa14.02□□□□□ -0.17
SKA2-208ENST00000583927 ABTB2Q8N961 1025 aa14.02□□□□□ -0.17
SKA2-208ENST00000583927 PCGF6Q9BYE7 350 aa14.02□□□□□ -0.17
SKA2-208ENST00000583927 ONECUT3O60422 494 aaPredicted RBP14.01□□□□□ -0.17
SKA2-208ENST00000583927 NLRP13Q86W25 1043 aa14.01□□□□□ -0.17
SKA2-208ENST00000583927 UPF1Q92900 1129 aaKnown RBP eCLIP14□□□□□ -0.17
SKA2-208ENST00000583927 TESK2Q96S53 571 aa14□□□□□ -0.17
SKA2-208ENST00000583927 KIAA0232Q92628 1395 aa13.99□□□□□ -0.17
SKA2-208ENST00000583927 TTC21AQ8NDW8 1320 aa13.99□□□□□ -0.17
SKA2-208ENST00000583927 BTG4Q9NY30 223 aa13.99□□□□□ -0.17
SKA2-208ENST00000583927 CD163L1Q9NR16 1453 aa13.99□□□□□ -0.17
SKA2-208ENST00000583927 COL18A1P39060 1754 aa13.99□□□□□ -0.17
SKA2-208ENST00000583927 NINLQ9Y2I6 1382 aa13.98□□□□□ -0.17
SKA2-208ENST00000583927 PRDM11Q9NQV5 511 aa13.98□□□□□ -0.17
SKA2-208ENST00000583927 ST20-MTHFSA0A0A6YYL1 179 aa13.97□□□□□ -0.17
SKA2-208ENST00000583927 GCP02774 474 aa13.97□□□□□ -0.17
SKA2-208ENST00000583927 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.17
SKA2-208ENST00000583927 TTC21BQ7Z4L5 1316 aa13.96□□□□□ -0.17
SKA2-208ENST00000583927 THSD7AQ9UPZ6 1657 aa13.96□□□□□ -0.17
SKA2-208ENST00000583927 RGPD5Q99666 1765 aa13.96□□□□□ -0.18
SKA2-208ENST00000583927 USP47Q96K76 1375 aa13.96□□□□□ -0.18
SKA2-208ENST00000583927 ABCC6O95255 1503 aa13.95□□□□□ -0.18
SKA2-208ENST00000583927 CAMTA1Q9Y6Y1 1673 aa13.95□□□□□ -0.18
SKA2-208ENST00000583927 PLEKHG5O94827 1062 aa13.95□□□□□ -0.18
SKA2-208ENST00000583927 NLRP6P59044 892 aa13.95□□□□□ -0.18
SKA2-208ENST00000583927 NUTM2GQ5VZR2 741 aa13.95□□□□□ -0.18
SKA2-208ENST00000583927 SPATA31A5Q5VU36 1347 aa13.94□□□□□ -0.18
SKA2-208ENST00000583927 SPATA31A7Q8IWB4 1347 aa13.94□□□□□ -0.18
SKA2-208ENST00000583927 ZC3H6P61129 1189 aaKnown RBP13.94□□□□□ -0.18
SKA2-208ENST00000583927 EDC4Q6P2E9 1401 aaKnown RBP13.94□□□□□ -0.18
SKA2-208ENST00000583927 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
SKA2-208ENST00000583927 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
SKA2-208ENST00000583927 NFAT5O94916 1531 aa13.93□□□□□ -0.18
SKA2-208ENST00000583927 LTN1O94822 1766 aa13.93□□□□□ -0.18
SKA2-208ENST00000583927 AATKQ6ZMQ8 1374 aa13.93□□□□□ -0.18
SKA2-208ENST00000583927 HDGFL2Q7Z4V5 671 aaPredicted RBP13.92□□□□□ -0.18
SKA2-208ENST00000583927 SEPT12Q8IYM1 358 aa13.92□□□□□ -0.18
SKA2-208ENST00000583927 KCNH5Q8NCM2 988 aa13.92□□□□□ -0.18
SKA2-208ENST00000583927 TERF2IPQ9NYB0 399 aa13.92□□□□□ -0.18
SKA2-208ENST00000583927 COL5A2P05997 1499 aaPredicted RBP13.92□□□□□ -0.18
SKA2-208ENST00000583927 TMF1P82094 1093 aa13.91□□□□□ -0.18
SKA2-208ENST00000583927 CHRNA2Q15822 529 aa13.91□□□□□ -0.18
SKA2-208ENST00000583927 SLC12A5Q9H2X9 1139 aa13.91□□□□□ -0.18
SKA2-208ENST00000583927 CCDC9Q9Y3X0 531 aaKnown RBP13.91□□□□□ -0.18
SKA2-208ENST00000583927 WNK3Q9BYP7 1800 aa13.91□□□□□ -0.18
SKA2-208ENST00000583927 A0A1W2PP64 1363 aa13.91□□□□□ -0.18
SKA2-208ENST00000583927 SPATA31A1Q5TZJ5 1347 aa13.9□□□□□ -0.18
SKA2-208ENST00000583927 PARP4Q9UKK3 1724 aaKnown RBP13.9□□□□□ -0.18
SKA2-208ENST00000583927 CCER1Q8TC90 406 aaPredicted RBP13.9□□□□□ -0.18
SKA2-208ENST00000583927 MYOM1P52179 1685 aa13.9□□□□□ -0.18
SKA2-208ENST00000583927 CDCA8Q53HL2 280 aa13.89□□□□□ -0.19
SKA2-208ENST00000583927 ARHGEF25Q86VW2 580 aa13.89□□□□□ -0.19
SKA2-208ENST00000583927 TMC1Q8TDI8 760 aa13.89□□□□□ -0.19
SKA2-208ENST00000583927 ANKRD36BQ8N2N9 1353 aa13.88□□□□□ -0.19
SKA2-208ENST00000583927 RGPD1P0DJD0 1748 aa13.88□□□□□ -0.19
SKA2-208ENST00000583927 FAM98CQ17RN3 349 aaKnown RBP13.88□□□□□ -0.19
SKA2-208ENST00000583927 BARGINQ6ZT62 677 aa13.88□□□□□ -0.19
SKA2-208ENST00000583927 KRT27Q7Z3Y8 459 aa13.88□□□□□ -0.19
SKA2-208ENST00000583927 POTEDQ86YR6 584 aa13.88□□□□□ -0.19
SKA2-208ENST00000583927 THRAP3Q9Y2W1 955 aaKnown RBP13.88□□□□□ -0.19
SKA2-208ENST00000583927 KIF20BQ96Q89 1820 aa13.87□□□□□ -0.19
SKA2-208ENST00000583927 EVA1CP58658 441 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms