RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 COL14A1Q05707 1796 aaKnown RBP14.22□□□□□ -0.13
MKS1-212ENST00000583577 GIGYF1O75420 1035 aaPredicted RBP14.21□□□□□ -0.13
MKS1-212ENST00000583577 PSME1Q06323 249 aa14.21□□□□□ -0.13
MKS1-212ENST00000583577 MYOM1P52179 1685 aa14.2□□□□□ -0.14
MKS1-212ENST00000583577 GOLGB1Q14789 3259 aaKnown RBP14.2□□□□□ -0.14
MKS1-212ENST00000583577 WAPLQ7Z5K2 1190 aa14.2□□□□□ -0.14
MKS1-212ENST00000583577 VGFO15240 615 aaPredicted RBP14.19□□□□□ -0.14
MKS1-212ENST00000583577 STK26Q9P289 416 aa14.18□□□□□ -0.14
MKS1-212ENST00000583577 ARHGEF10O15013 1369 aa14.18□□□□□ -0.14
MKS1-212ENST00000583577 RAB3GAP2Q9H2M9 1393 aa14.18□□□□□ -0.14
MKS1-212ENST00000583577 PHF8Q9UPP1 1060 aa14.17□□□□□ -0.14
MKS1-212ENST00000583577 IFT172Q9UG01 1749 aa14.17□□□□□ -0.14
MKS1-212ENST00000583577 CASZ1Q86V15 1759 aa14.17□□□□□ -0.14
MKS1-212ENST00000583577 ZBTB7AO95365 584 aa14.16□□□□□ -0.14
MKS1-212ENST00000583577 SBNO1A3KN83 1393 aa14.15□□□□□ -0.14
MKS1-212ENST00000583577 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
MKS1-212ENST00000583577 PPLO60437 1756 aa14.14□□□□□ -0.15
MKS1-212ENST00000583577 PDE3BQ13370 1112 aa14.14□□□□□ -0.15
MKS1-212ENST00000583577 PDGFDQ9GZP0 370 aaPredicted RBP14.14□□□□□ -0.15
MKS1-212ENST00000583577 PLEKHH1Q9ULM0 1364 aa14.13□□□□□ -0.15
MKS1-212ENST00000583577 SYT17Q9BSW7 474 aa14.13□□□□□ -0.15
MKS1-212ENST00000583577 FHDC1Q9C0D6 1143 aaPredicted RBP14.13□□□□□ -0.15
MKS1-212ENST00000583577 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
MKS1-212ENST00000583577 SPATA31A1Q5TZJ5 1347 aa14.13□□□□□ -0.15
MKS1-212ENST00000583577 USP35Q9P2H5 1018 aa14.12□□□□□ -0.15
MKS1-212ENST00000583577 PTGER2P43116 358 aa14.11□□□□□ -0.15
MKS1-212ENST00000583577 STRN4Q9NRL3 753 aa14.11□□□□□ -0.15
MKS1-212ENST00000583577 MPHOSPH9Q99550 1183 aa14.1□□□□□ -0.15
MKS1-212ENST00000583577 ANO8Q9HCE9 1232 aaPredicted RBP14.1□□□□□ -0.15
MKS1-212ENST00000583577 NRXN1Q9ULB1 1477 aa14.1□□□□□ -0.15
MKS1-212ENST00000583577 PMFBP1Q8TBY8 1022 aa14.09□□□□□ -0.15
MKS1-212ENST00000583577 PRDM11Q9NQV5 511 aa14.09□□□□□ -0.15
MKS1-212ENST00000583577 KNDC1Q76NI1 1749 aa14.09□□□□□ -0.15
MKS1-212ENST00000583577 TRPM3Q9HCF6 1732 aaPredicted RBP14.09□□□□□ -0.15
MKS1-212ENST00000583577 SBF2Q86WG5 1849 aa14.08□□□□□ -0.15
MKS1-212ENST00000583577 ALS2Q96Q42 1657 aa14.08□□□□□ -0.16
MKS1-212ENST00000583577 DLC1Q96QB1 1528 aa14.08□□□□□ -0.16
MKS1-212ENST00000583577 TECPR2O15040 1411 aa14.07□□□□□ -0.16
MKS1-212ENST00000583577 RPGRIP1LQ68CZ1 1315 aa14.07□□□□□ -0.16
MKS1-212ENST00000583577 CRYBG1Q9Y4K1 1723 aa14.07□□□□□ -0.16
MKS1-212ENST00000583577 RGPD3A6NKT7 1758 aaPredicted RBP14.06□□□□□ -0.16
MKS1-212ENST00000583577 RGPD4Q7Z3J3 1758 aa14.06□□□□□ -0.16
MKS1-212ENST00000583577 CHRNA2Q15822 529 aa14.06□□□□□ -0.16
MKS1-212ENST00000583577 GPR162Q16538 588 aa14.06□□□□□ -0.16
MKS1-212ENST00000583577 TMEM132EQ6IEE7 984 aa14.06□□□□□ -0.16
MKS1-212ENST00000583577 BCL11BQ9C0K0 894 aaPredicted RBP14.06□□□□□ -0.16
MKS1-212ENST00000583577 NEUROD1Q13562 356 aa14.05□□□□□ -0.16
MKS1-212ENST00000583577 SHANK3Q9BYB0 1731 aa14.04□□□□□ -0.16
MKS1-212ENST00000583577 ABCC11Q96J66 1382 aa14.04□□□□□ -0.16
MKS1-212ENST00000583577 EVA1CP58658 441 aa14.03□□□□□ -0.16
MKS1-212ENST00000583577 DHX57Q6P158 1386 aaKnown RBP14.03□□□□□ -0.16
MKS1-212ENST00000583577 KIAA0232Q92628 1395 aa14.02□□□□□ -0.17
MKS1-212ENST00000583577 ADGRF5Q8IZF2 1346 aa14.02□□□□□ -0.17
MKS1-212ENST00000583577 BARGINQ6ZT62 677 aa14.02□□□□□ -0.17
MKS1-212ENST00000583577 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
MKS1-212ENST00000583577 SAFB2Q14151 953 aaKnown RBP eCLIP14.01□□□□□ -0.17
MKS1-212ENST00000583577 GPRASP1Q5JY77 1395 aa14□□□□□ -0.17
MKS1-212ENST00000583577 PLSCR1O15162 318 aa14□□□□□ -0.17
MKS1-212ENST00000583577 ZC3H6P61129 1189 aaKnown RBP14□□□□□ -0.17
MKS1-212ENST00000583577 ARXQ96QS3 562 aa14□□□□□ -0.17
MKS1-212ENST00000583577 MTFR1LQ9H019 292 aa14□□□□□ -0.17
MKS1-212ENST00000583577 STK32BQ9NY57 414 aa14□□□□□ -0.17
MKS1-212ENST00000583577 PARP4Q9UKK3 1724 aaKnown RBP13.99□□□□□ -0.17
MKS1-212ENST00000583577 CAPN15O75808 1086 aa13.99□□□□□ -0.17
MKS1-212ENST00000583577 TCP11L2Q8N4U5 519 aa13.99□□□□□ -0.17
MKS1-212ENST00000583577 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
MKS1-212ENST00000583577 PHRF1Q9P1Y6 1649 aaKnown RBP13.98□□□□□ -0.17
MKS1-212ENST00000583577 LARP1Q6PKG0 1096 aaKnown RBP13.98□□□□□ -0.17
MKS1-212ENST00000583577 KLHL34Q8N239 644 aa13.98□□□□□ -0.17
MKS1-212ENST00000583577 KAT6BQ8WYB5 2073 aa13.98□□□□□ -0.17
MKS1-212ENST00000583577 PEAK1Q9H792 1746 aa13.98□□□□□ -0.17
MKS1-212ENST00000583577 SSH2Q76I76 1423 aa13.98□□□□□ -0.17
MKS1-212ENST00000583577 HSPA6P17066 643 aa13.97□□□□□ -0.17
MKS1-212ENST00000583577 PTF1AQ7RTS3 328 aa13.97□□□□□ -0.17
MKS1-212ENST00000583577 PROM2Q8N271 834 aa13.97□□□□□ -0.17
MKS1-212ENST00000583577 SGIP1Q9BQI5 828 aa13.97□□□□□ -0.17
MKS1-212ENST00000583577 TIMELESSQ9UNS1 1208 aa13.97□□□□□ -0.17
MKS1-212ENST00000583577 C11orf95C9JLR9 678 aaPredicted RBP13.96□□□□□ -0.17
MKS1-212ENST00000583577 SLC15A2Q16348 729 aa13.96□□□□□ -0.17
MKS1-212ENST00000583577 GTF3C3Q9Y5Q9 886 aa13.96□□□□□ -0.17
MKS1-212ENST00000583577 OVOS2A0A0G2JMS6 1433 aa13.96□□□□□ -0.18
MKS1-212ENST00000583577 OVOS2A0A0J9YW53 1432 aa13.96□□□□□ -0.18
MKS1-212ENST00000583577 OVOS2Q6IE36 1432 aa13.96□□□□□ -0.18
MKS1-212ENST00000583577 ANKRD30BQ9BXX2 1392 aa13.96□□□□□ -0.18
MKS1-212ENST00000583577 ANKARQ7Z5J8 1434 aa13.95□□□□□ -0.18
MKS1-212ENST00000583577 RGL3Q3MIN7 710 aa13.94□□□□□ -0.18
MKS1-212ENST00000583577 MAP3K5Q99683 1374 aa13.94□□□□□ -0.18
MKS1-212ENST00000583577 NUTM2GQ5VZR2 741 aa13.93□□□□□ -0.18
MKS1-212ENST00000583577 NGDNQ8NEJ9 315 aaKnown RBP13.93□□□□□ -0.18
MKS1-212ENST00000583577 SIRT1Q96EB6 747 aa13.93□□□□□ -0.18
MKS1-212ENST00000583577 PRAM1Q96QH2 718 aa13.93□□□□□ -0.18
MKS1-212ENST00000583577 AKAP12Q02952 1782 aa13.92□□□□□ -0.18
MKS1-212ENST00000583577 TXNRD1Q16881 649 aa13.92□□□□□ -0.18
MKS1-212ENST00000583577 PCNTO95613 3336 aa13.92□□□□□ -0.18
MKS1-212ENST00000583577 ATP10DQ9P241 1426 aa13.91□□□□□ -0.18
MKS1-212ENST00000583577 THRAP3Q9Y2W1 955 aaKnown RBP13.91□□□□□ -0.18
MKS1-212ENST00000583577 HIRIP3Q9BW71 556 aaPredicted RBP13.9□□□□□ -0.18
MKS1-212ENST00000583577 GPBP1L1Q9HC44 474 aaPredicted RBP13.9□□□□□ -0.18
MKS1-212ENST00000583577 POGKQ9P215 609 aa13.9□□□□□ -0.18
MKS1-212ENST00000583577 LRRC37A3O60309 1634 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms