RNA–Protein interactions for RNA: ENST00000583382.1

CDH8-209, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 1,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-209ENST00000583382 PRXQ9BXM0 1461 aa7.75□□□□□ -1.17
CDH8-209ENST00000583382 OATP04181 439 aa7.74□□□□□ -1.17
CDH8-209ENST00000583382 AFAP1Q8N556 730 aa7.74□□□□□ -1.17
CDH8-209ENST00000583382 RBM46Q8TBY0 533 aaKnown RBP7.74□□□□□ -1.17
CDH8-209ENST00000583382 AK7Q96M32 723 aa7.74□□□□□ -1.17
CDH8-209ENST00000583382 NBPF3Q9H094 633 aa7.74□□□□□ -1.17
CDH8-209ENST00000583382 ABCA6Q8N139 1617 aa7.74□□□□□ -1.17
CDH8-209ENST00000583382 MLH3Q9UHC1 1453 aa7.74□□□□□ -1.17
CDH8-209ENST00000583382 MRPL50Q8N5N7 158 aaKnown RBP7.73□□□□□ -1.17
CDH8-209ENST00000583382 SHANK2Q9UPX8 1470 aa7.73□□□□□ -1.17
CDH8-209ENST00000583382 ZMYM3Q14202 1370 aa7.72□□□□□ -1.17
CDH8-209ENST00000583382 ARHGAP5Q13017 1502 aa7.72□□□□□ -1.17
CDH8-209ENST00000583382 TRIM66O15016 1216 aa7.72□□□□□ -1.17
CDH8-209ENST00000583382 FAM98CQ17RN3 349 aaKnown RBP7.72□□□□□ -1.17
CDH8-209ENST00000583382 NLRP7Q8WX94 980 aa7.72□□□□□ -1.17
CDH8-209ENST00000583382 RCCD1A6NED2 376 aa7.71□□□□□ -1.18
CDH8-209ENST00000583382 RANGAP1P46060 587 aaPredicted RBP7.71□□□□□ -1.18
CDH8-209ENST00000583382 LAPTM4BQ86VI4 370 aa7.71□□□□□ -1.18
CDH8-209ENST00000583382 STAC3Q96MF2 364 aa7.71□□□□□ -1.18
CDH8-209ENST00000583382 KIF14Q15058 1648 aa7.7□□□□□ -1.18
CDH8-209ENST00000583382 RNF17Q9BXT8 1623 aaKnown RBP7.7□□□□□ -1.18
CDH8-209ENST00000583382 CLTCQ00610 1675 aaKnown RBP7.7□□□□□ -1.18
CDH8-209ENST00000583382 CDK11AQ9UQ88 783 aaPredicted RBP7.7□□□□□ -1.18
CDH8-209ENST00000583382 SPNS2Q8IVW8 549 aa7.69□□□□□ -1.18
CDH8-209ENST00000583382 ZFRQ96KR1 1074 aaKnown RBP7.69□□□□□ -1.18
CDH8-209ENST00000583382 A2ML1A8K2U0 1454 aa7.69□□□□□ -1.18
CDH8-209ENST00000583382 KIDINS220Q9ULH0 1771 aa7.69□□□□□ -1.18
CDH8-209ENST00000583382 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.68□□□□□ -1.18
CDH8-209ENST00000583382 DNAJB2P25686 324 aa7.68□□□□□ -1.18
CDH8-209ENST00000583382 SYNMO15061 1565 aa7.68□□□□□ -1.18
CDH8-209ENST00000583382 DNMT1P26358 1616 aaKnown RBP7.68□□□□□ -1.18
CDH8-209ENST00000583382 ALKQ9UM73 1620 aa7.68□□□□□ -1.18
CDH8-209ENST00000583382 ITSN2Q9NZM3 1697 aa7.68□□□□□ -1.18
CDH8-209ENST00000583382 SETD1AO15047 1707 aaKnown RBP7.68□□□□□ -1.18
CDH8-209ENST00000583382 AMHR2Q16671 573 aa7.68□□□□□ -1.18
CDH8-209ENST00000583382 TMEM134Q9H6X4 195 aa7.68□□□□□ -1.18
CDH8-209ENST00000583382 CDK13Q14004 1512 aaKnown RBP7.67□□□□□ -1.18
CDH8-209ENST00000583382 CLIP1P30622 1438 aa7.67□□□□□ -1.18
CDH8-209ENST00000583382 GOLGA8CPA6NN73 597 aa7.67□□□□□ -1.18
CDH8-209ENST00000583382 MDM2Q00987 491 aaPredicted RBP7.67□□□□□ -1.18
CDH8-209ENST00000583382 CDC42BPBQ9Y5S2 1711 aa7.66□□□□□ -1.18
CDH8-209ENST00000583382 VWDEQ8N2E2 1590 aa7.66□□□□□ -1.18
CDH8-209ENST00000583382 NEURL4Q96JN8 1562 aa7.66□□□□□ -1.18
CDH8-209ENST00000583382 PDE4DQ08499 809 aa7.66□□□□□ -1.18
CDH8-209ENST00000583382 SWT1Q5T5J6 900 aaKnown RBP7.66□□□□□ -1.18
CDH8-209ENST00000583382 SAMD7Q7Z3H4 446 aa7.66□□□□□ -1.18
CDH8-209ENST00000583382 ANKLE2Q86XL3 938 aa7.66□□□□□ -1.18
CDH8-209ENST00000583382 REPIN1Q9BWE0 567 aaKnown RBP7.66□□□□□ -1.18
CDH8-209ENST00000583382 DEPDC5O75140 1603 aa7.66□□□□□ -1.18
CDH8-209ENST00000583382 ABCC1P33527 1531 aa7.65□□□□□ -1.18
CDH8-209ENST00000583382 WNT2BQ93097 391 aa7.65□□□□□ -1.18
CDH8-209ENST00000583382 TMUB1Q9BVT8 246 aa7.65□□□□□ -1.18
CDH8-209ENST00000583382 PREX2Q70Z35 1606 aa7.64□□□□□ -1.19
CDH8-209ENST00000583382 PARP9Q8IXQ6 854 aa7.64□□□□□ -1.19
CDH8-209ENST00000583382 ANKK1Q8NFD2 765 aa7.64□□□□□ -1.19
CDH8-209ENST00000583382 DAXXQ9UER7 740 aaPredicted RBP7.64□□□□□ -1.19
CDH8-209ENST00000583382 IQGAP1P46940 1657 aa7.64□□□□□ -1.19
CDH8-209ENST00000583382 TTLL12Q14166 644 aaPredicted RBP7.63□□□□□ -1.19
CDH8-209ENST00000583382 KCTD12Q96CX2 325 aaKnown RBP7.63□□□□□ -1.19
CDH8-209ENST00000583382 MED14O60244 1454 aa7.63□□□□□ -1.19
CDH8-209ENST00000583382 TROQ12816 1431 aaPredicted RBP7.63□□□□□ -1.19
CDH8-209ENST00000583382 LRRC7Q96NW7 1537 aa7.63□□□□□ -1.19
CDH8-209ENST00000583382 CLCN1P35523 988 aa7.62□□□□□ -1.19
CDH8-209ENST00000583382 BCAMP50895 628 aa7.62□□□□□ -1.19
CDH8-209ENST00000583382 HDGFP51858 240 aaKnown RBP7.62□□□□□ -1.19
CDH8-209ENST00000583382 THEMISQ8N1K5 641 aaPredicted RBP7.62□□□□□ -1.19
CDH8-209ENST00000583382 TRIM52Q96A61 297 aa7.62□□□□□ -1.19
CDH8-209ENST00000583382 LRCH3Q96II8 777 aa7.62□□□□□ -1.19
CDH8-209ENST00000583382 GPCPD1Q9NPB8 672 aa7.62□□□□□ -1.19
CDH8-209ENST00000583382 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.62□□□□□ -1.19
CDH8-209ENST00000583382 ATP1B4Q9UN42 357 aaPredicted RBP7.62□□□□□ -1.19
CDH8-209ENST00000583382 NPHP4O75161 1426 aaPredicted RBP7.62□□□□□ -1.19
CDH8-209ENST00000583382 SRCAPQ6ZRS2 3230 aa7.62□□□□□ -1.19
CDH8-209ENST00000583382 SOWAHBA6NEL2 793 aa7.62□□□□□ -1.19
CDH8-209ENST00000583382 GGT6Q6P531 493 aa7.62□□□□□ -1.19
CDH8-209ENST00000583382 GIGYF2Q6Y7W6 1299 aaKnown RBP7.62□□□□□ -1.19
CDH8-209ENST00000583382 GPBP1L1Q9HC44 474 aaPredicted RBP7.62□□□□□ -1.19
CDH8-209ENST00000583382 STRCP1A6NGW2 1772 aa7.61□□□□□ -1.19
CDH8-209ENST00000583382 BRPF1P55201 1214 aaPredicted RBP7.61□□□□□ -1.19
CDH8-209ENST00000583382 THSD4Q6ZMP0 1018 aa7.61□□□□□ -1.19
CDH8-209ENST00000583382 FMN1Q68DA7 1419 aa7.61□□□□□ -1.19
CDH8-209ENST00000583382 PLXNC1O60486 1568 aa7.61□□□□□ -1.19
CDH8-209ENST00000583382 SAMD9LQ8IVG5 1584 aa7.61□□□□□ -1.19
CDH8-209ENST00000583382 FAM135AQ9P2D6 1515 aa7.61□□□□□ -1.19
CDH8-209ENST00000583382 ADGBQ8N7X0 1667 aa7.61□□□□□ -1.19
CDH8-209ENST00000583382 FAM135BQ49AJ0 1406 aa7.6□□□□□ -1.19
CDH8-209ENST00000583382 RNF40O75150 1001 aa7.6□□□□□ -1.19
CDH8-209ENST00000583382 SLF2Q8IX21 1173 aa7.6□□□□□ -1.19
CDH8-209ENST00000583382 FAM217BQ9NTX9 383 aaPredicted RBP7.6□□□□□ -1.19
CDH8-209ENST00000583382 TNRQ92752 1358 aa7.6□□□□□ -1.19
CDH8-209ENST00000583382 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.6□□□□□ -1.19
CDH8-209ENST00000583382 A2MP01023 1474 aa7.6□□□□□ -1.19
CDH8-209ENST00000583382 SPAG9O60271 1321 aaKnown RBP7.59□□□□□ -1.19
CDH8-209ENST00000583382 DDX11L8A8MPP1 907 aa7.59□□□□□ -1.19
CDH8-209ENST00000583382 MMRN1Q13201 1228 aa7.59□□□□□ -1.19
CDH8-209ENST00000583382 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
CDH8-209ENST00000583382 RNF166Q96A37 237 aaPredicted RBP7.59□□□□□ -1.19
CDH8-209ENST00000583382 ATP7AQ04656 1500 aa7.59□□□□□ -1.19
CDH8-209ENST00000583382 NLRP1Q9C000 1473 aa7.59□□□□□ -1.19
CDH8-209ENST00000583382 UGGT1Q9NYU2 1555 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms