RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 KIF20BQ96Q89 1820 aa19.46■□□□□ 0.71
GGA3-216ENST00000583282 COL22A1Q8NFW1 1626 aaPredicted RBP19.45■□□□□ 0.7
GGA3-216ENST00000583282 PAK3O75914 559 aaPredicted RBP19.45■□□□□ 0.7
GGA3-216ENST00000583282 HDGFL2Q7Z4V5 671 aaPredicted RBP19.45■□□□□ 0.7
GGA3-216ENST00000583282 PLEKHG5O94827 1062 aa19.44■□□□□ 0.7
GGA3-216ENST00000583282 LMOD2Q6P5Q4 547 aa19.44■□□□□ 0.7
GGA3-216ENST00000583282 SBNO1A3KN83 1393 aa19.44■□□□□ 0.7
GGA3-216ENST00000583282 PNPLA6Q8IY17 1366 aa19.44■□□□□ 0.7
GGA3-216ENST00000583282 CRYBG1Q9Y4K1 1723 aa19.43■□□□□ 0.7
GGA3-216ENST00000583282 TERF2IPQ9NYB0 399 aa19.43■□□□□ 0.7
GGA3-216ENST00000583282 PHRF1Q9P1Y6 1649 aaKnown RBP19.43■□□□□ 0.7
GGA3-216ENST00000583282 JCADQ9P266 1359 aa19.43■□□□□ 0.7
GGA3-216ENST00000583282 SPATA31A3Q5VYP0 1347 aa19.42■□□□□ 0.7
GGA3-216ENST00000583282 MARF1Q9Y4F3 1742 aaKnown RBP19.42■□□□□ 0.7
GGA3-216ENST00000583282 EDC4Q6P2E9 1401 aaKnown RBP19.42■□□□□ 0.7
GGA3-216ENST00000583282 NSD3Q9BZ95 1437 aa19.42■□□□□ 0.7
GGA3-216ENST00000583282 MED1Q15648 1581 aaPredicted RBP19.41■□□□□ 0.7
GGA3-216ENST00000583282 LRRC59Q96AG4 307 aaKnown RBP19.4■□□□□ 0.7
GGA3-216ENST00000583282 ARHGEF10O15013 1369 aa19.4■□□□□ 0.7
GGA3-216ENST00000583282 SSH2Q76I76 1423 aa19.4■□□□□ 0.7
GGA3-216ENST00000583282 NUTM2GQ5VZR2 741 aa19.39■□□□□ 0.69
GGA3-216ENST00000583282 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.39■□□□□ 0.69
GGA3-216ENST00000583282 TTC21BQ7Z4L5 1316 aa19.38■□□□□ 0.69
GGA3-216ENST00000583282 USP54Q70EL1 1684 aa19.37■□□□□ 0.69
GGA3-216ENST00000583282 LRP6O75581 1613 aa19.37■□□□□ 0.69
GGA3-216ENST00000583282 ZNF692Q9BU19 519 aaPredicted RBP19.37■□□□□ 0.69
GGA3-216ENST00000583282 BRD4O60885 1362 aaPredicted RBP19.36■□□□□ 0.69
GGA3-216ENST00000583282 ANKRD26Q9UPS8 1709 aa19.35■□□□□ 0.69
GGA3-216ENST00000583282 TTC21AQ8NDW8 1320 aa19.34■□□□□ 0.69
GGA3-216ENST00000583282 NUTM2BA6NNL0 878 aaPredicted RBP19.34■□□□□ 0.69
GGA3-216ENST00000583282 NUTM2EB1AL46 878 aaPredicted RBP19.34■□□□□ 0.69
GGA3-216ENST00000583282 NME9Q86XW9 330 aa19.34■□□□□ 0.69
GGA3-216ENST00000583282 NUTM2AQ8IVF1 878 aaPredicted RBP19.34■□□□□ 0.69
GGA3-216ENST00000583282 ABTB2Q8N961 1025 aa19.34■□□□□ 0.69
GGA3-216ENST00000583282 PANK3Q9H999 370 aa19.34■□□□□ 0.69
GGA3-216ENST00000583282 SLIT3O75094 1523 aa19.32■□□□□ 0.68
GGA3-216ENST00000583282 HAP1P54257 671 aaPredicted RBP19.32■□□□□ 0.68
GGA3-216ENST00000583282 CABLES1Q8TDN4 633 aa19.32■□□□□ 0.68
GGA3-216ENST00000583282 CARD14Q9BXL6 1004 aa19.32■□□□□ 0.68
GGA3-216ENST00000583282 ZRANB1Q9UGI0 708 aa19.31■□□□□ 0.68
GGA3-216ENST00000583282 OVOS2A0A0J9YW53 1432 aa19.31■□□□□ 0.68
GGA3-216ENST00000583282 OVOS2Q6IE36 1432 aa19.31■□□□□ 0.68
GGA3-216ENST00000583282 SPATA31A6Q5VVP1 1343 aa19.3■□□□□ 0.68
GGA3-216ENST00000583282 ZNF316A6NFI3 1004 aaPredicted RBP19.29■□□□□ 0.68
GGA3-216ENST00000583282 SOX12O15370 315 aa19.29■□□□□ 0.68
GGA3-216ENST00000583282 NLRP6P59044 892 aa19.29■□□□□ 0.68
GGA3-216ENST00000583282 USP19O94966 1318 aa19.28■□□□□ 0.68
GGA3-216ENST00000583282 PLCH1Q4KWH8 1693 aa19.28■□□□□ 0.68
GGA3-216ENST00000583282 LTN1O94822 1766 aa19.27■□□□□ 0.68
GGA3-216ENST00000583282 NFAT5O94916 1531 aa19.27■□□□□ 0.68
GGA3-216ENST00000583282 ADAMTS2O95450 1211 aa19.27■□□□□ 0.68
GGA3-216ENST00000583282 GGNBP2Q9H3C7 697 aa19.27■□□□□ 0.68
GGA3-216ENST00000583282 CGNL1Q0VF96 1302 aa19.26■□□□□ 0.67
GGA3-216ENST00000583282 MEX3CQ5U5Q3 659 aaKnown RBP19.26■□□□□ 0.67
GGA3-216ENST00000583282 NLRP13Q86W25 1043 aa19.26■□□□□ 0.67
GGA3-216ENST00000583282 USP31Q70CQ4 1352 aa19.25■□□□□ 0.67
GGA3-216ENST00000583282 CNGB1Q14028 1251 aaPredicted RBP19.25■□□□□ 0.67
GGA3-216ENST00000583282 ZBTB7CA1YPR0 619 aa19.24■□□□□ 0.67
GGA3-216ENST00000583282 KNSTRNQ9Y448 316 aa19.24■□□□□ 0.67
GGA3-216ENST00000583282 DDX10Q13206 875 aaKnown RBP19.23■□□□□ 0.67
GGA3-216ENST00000583282 COG3Q96JB2 828 aa19.23■□□□□ 0.67
GGA3-216ENST00000583282 COL14A1Q05707 1796 aaKnown RBP19.22■□□□□ 0.67
GGA3-216ENST00000583282 FYB1O15117 783 aa19.22■□□□□ 0.67
GGA3-216ENST00000583282 NSD2O96028 1365 aa19.21■□□□□ 0.67
GGA3-216ENST00000583282 KIAA0232Q92628 1395 aa19.21■□□□□ 0.67
GGA3-216ENST00000583282 C8orf37Q96NL8 207 aa19.21■□□□□ 0.67
GGA3-216ENST00000583282 ZC3H6P61129 1189 aaKnown RBP19.2■□□□□ 0.66
GGA3-216ENST00000583282 NRAPQ86VF7 1730 aa19.2■□□□□ 0.66
GGA3-216ENST00000583282 GCP02774 474 aa19.19■□□□□ 0.66
GGA3-216ENST00000583282 CC2D1BQ5T0F9 858 aaKnown RBP19.19■□□□□ 0.66
GGA3-216ENST00000583282 LMO7Q8WWI1 1683 aa19.19■□□□□ 0.66
GGA3-216ENST00000583282 NWD2Q9ULI1 1742 aa19.18■□□□□ 0.66
GGA3-216ENST00000583282 PRDM11Q9NQV5 511 aa19.18■□□□□ 0.66
GGA3-216ENST00000583282 RGPD5Q99666 1765 aa19.17■□□□□ 0.66
GGA3-216ENST00000583282 TNNT2P45379 298 aaPredicted RBP19.17■□□□□ 0.66
GGA3-216ENST00000583282 CHRNA2Q15822 529 aa19.17■□□□□ 0.66
GGA3-216ENST00000583282 AMER1Q5JTC6 1135 aaPredicted RBP19.17■□□□□ 0.66
GGA3-216ENST00000583282 PEAK1Q9H792 1746 aa19.17■□□□□ 0.66
GGA3-216ENST00000583282 PER1O15534 1290 aaPredicted RBP19.16■□□□□ 0.66
GGA3-216ENST00000583282 KCNH5Q8NCM2 988 aa19.16■□□□□ 0.66
GGA3-216ENST00000583282 COL18A1P39060 1754 aa19.16■□□□□ 0.66
GGA3-216ENST00000583282 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.15■□□□□ 0.66
GGA3-216ENST00000583282 FBLN1P23142 703 aa19.15■□□□□ 0.66
GGA3-216ENST00000583282 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
GGA3-216ENST00000583282 CPDO75976 1380 aa19.15■□□□□ 0.66
GGA3-216ENST00000583282 MAP2P11137 1827 aaKnown RBP19.14■□□□□ 0.65
GGA3-216ENST00000583282 AFF2P51816 1311 aa19.14■□□□□ 0.65
GGA3-216ENST00000583282 RRS1Q15050 365 aaKnown RBP19.13■□□□□ 0.65
GGA3-216ENST00000583282 MORC1Q86VD1 984 aa19.13■□□□□ 0.65
GGA3-216ENST00000583282 NGLY1Q96IV0 654 aa19.13■□□□□ 0.65
GGA3-216ENST00000583282 SLIT2O94813 1529 aa19.13■□□□□ 0.65
GGA3-216ENST00000583282 ABCC6O95255 1503 aa19.13■□□□□ 0.65
GGA3-216ENST00000583282 NPC1L1Q9UHC9 1359 aa19.11■□□□□ 0.65
GGA3-216ENST00000583282 MAP3K19Q56UN5 1328 aa19.11■□□□□ 0.65
GGA3-216ENST00000583282 CAMTA1Q9Y6Y1 1673 aa19.11■□□□□ 0.65
GGA3-216ENST00000583282 FAM83GA6ND36 823 aa19.1■□□□□ 0.65
GGA3-216ENST00000583282 COL5A2P05997 1499 aaPredicted RBP19.09■□□□□ 0.65
GGA3-216ENST00000583282 ARHGEF25Q86VW2 580 aa19.09■□□□□ 0.65
GGA3-216ENST00000583282 BTG4Q9NY30 223 aa19.08■□□□□ 0.64
GGA3-216ENST00000583282 EMILIN1Q9Y6C2 1016 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms