RNA–Protein interactions for RNA: ENST00000582951.5

CUEDC1-211, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-211ENST00000582951 SSH2Q76I76 1423 aa21■□□□□ 0.95
CUEDC1-211ENST00000582951 NCOA3Q9Y6Q9 1424 aa21■□□□□ 0.95
CUEDC1-211ENST00000582951 MTHFSP49914 203 aa20.99■□□□□ 0.95
CUEDC1-211ENST00000582951 C14orf37Q86TY3 774 aa20.99■□□□□ 0.95
CUEDC1-211ENST00000582951 PROSER2Q86WR7 435 aaPredicted RBP20.99■□□□□ 0.95
CUEDC1-211ENST00000582951 TTC21BQ7Z4L5 1316 aa20.99■□□□□ 0.95
CUEDC1-211ENST00000582951 TTC21AQ8NDW8 1320 aa20.99■□□□□ 0.95
CUEDC1-211ENST00000582951 MAP2P11137 1827 aaKnown RBP20.99■□□□□ 0.95
CUEDC1-211ENST00000582951 NME9Q86XW9 330 aa20.98■□□□□ 0.95
CUEDC1-211ENST00000582951 ADAMTS8Q9UP79 889 aa20.98■□□□□ 0.95
CUEDC1-211ENST00000582951 USP54Q70EL1 1684 aa20.98■□□□□ 0.95
CUEDC1-211ENST00000582951 COL3A1P02461 1466 aaPredicted RBP20.97■□□□□ 0.95
CUEDC1-211ENST00000582951 NGDNQ8NEJ9 315 aaKnown RBP20.97■□□□□ 0.95
CUEDC1-211ENST00000582951 COG3Q96JB2 828 aa20.97■□□□□ 0.95
CUEDC1-211ENST00000582951 DMRT2Q9Y5R5 561 aa20.97■□□□□ 0.95
CUEDC1-211ENST00000582951 AATKQ6ZMQ8 1374 aa20.97■□□□□ 0.95
CUEDC1-211ENST00000582951 OVOS2A0A0J9YW53 1432 aa20.96■□□□□ 0.95
CUEDC1-211ENST00000582951 OVOS2Q6IE36 1432 aa20.96■□□□□ 0.95
CUEDC1-211ENST00000582951 SMG6Q86US8 1419 aaKnown RBP20.96■□□□□ 0.95
CUEDC1-211ENST00000582951 KIF1AQ12756 1690 aa20.96■□□□□ 0.95
CUEDC1-211ENST00000582951 PMFBP1Q8TBY8 1022 aa20.96■□□□□ 0.95
CUEDC1-211ENST00000582951 DCCP43146 1447 aa20.95■□□□□ 0.95
CUEDC1-211ENST00000582951 PIK3C2AO00443 1686 aa20.95■□□□□ 0.94
CUEDC1-211ENST00000582951 LRRC7Q96NW7 1537 aa20.94■□□□□ 0.94
CUEDC1-211ENST00000582951 RBM33Q96EV2 1170 aaKnown RBP20.94■□□□□ 0.94
CUEDC1-211ENST00000582951 PHF8Q9UPP1 1060 aa20.93■□□□□ 0.94
CUEDC1-211ENST00000582951 CDK12Q9NYV4 1490 aaPredicted RBP20.93■□□□□ 0.94
CUEDC1-211ENST00000582951 XIRP1Q702N8 1843 aaKnown RBP20.92■□□□□ 0.94
CUEDC1-211ENST00000582951 CERKQ8TCT0 537 aa20.92■□□□□ 0.94
CUEDC1-211ENST00000582951 TMEM94Q12767 1356 aa20.92■□□□□ 0.94
CUEDC1-211ENST00000582951 USP31Q70CQ4 1352 aa20.91■□□□□ 0.94
CUEDC1-211ENST00000582951 PNPLA6Q8IY17 1366 aa20.91■□□□□ 0.94
CUEDC1-211ENST00000582951 C19orf44Q9H6X5 657 aa20.91■□□□□ 0.94
CUEDC1-211ENST00000582951 GTF3C3Q9Y5Q9 886 aa20.91■□□□□ 0.94
CUEDC1-211ENST00000582951 MARF1Q9Y4F3 1742 aaKnown RBP20.9■□□□□ 0.94
CUEDC1-211ENST00000582951 ZRANB1Q9UGI0 708 aa20.89■□□□□ 0.93
CUEDC1-211ENST00000582951 NUDCQ9Y266 331 aa20.88■□□□□ 0.93
CUEDC1-211ENST00000582951 C1orf167Q5SNV9 1468 aa20.88■□□□□ 0.93
CUEDC1-211ENST00000582951 PDE3BQ13370 1112 aa20.87■□□□□ 0.93
CUEDC1-211ENST00000582951 POLKQ9UBT6 870 aa20.87■□□□□ 0.93
CUEDC1-211ENST00000582951 NGEFQ8N5V2 710 aa20.86■□□□□ 0.93
CUEDC1-211ENST00000582951 ESCO1Q5FWF5 840 aa20.85■□□□□ 0.93
CUEDC1-211ENST00000582951 MST1RQ04912 1400 aa20.85■□□□□ 0.93
CUEDC1-211ENST00000582951 MSH6P52701 1360 aa20.85■□□□□ 0.93
CUEDC1-211ENST00000582951 IQSEC2Q5JU85 1478 aa20.84■□□□□ 0.93
CUEDC1-211ENST00000582951 DIAPH1O60610 1272 aaKnown RBP20.84■□□□□ 0.93
CUEDC1-211ENST00000582951 ATF3P18847 181 aa20.84■□□□□ 0.93
CUEDC1-211ENST00000582951 TRPM3Q9HCF6 1732 aaPredicted RBP20.84■□□□□ 0.93
CUEDC1-211ENST00000582951 CCDC146Q8IYE0 955 aa20.83■□□□□ 0.93
CUEDC1-211ENST00000582951 SENP3-EIF4A1A0A087X0R7 540 aa20.82■□□□□ 0.92
CUEDC1-211ENST00000582951 RUNDC1Q96C34 613 aa20.82■□□□□ 0.92
CUEDC1-211ENST00000582951 EMILIN1Q9Y6C2 1016 aa20.82■□□□□ 0.92
CUEDC1-211ENST00000582951 PEAK1Q9H792 1746 aa20.81■□□□□ 0.92
CUEDC1-211ENST00000582951 U2AF1L5P0DN76 240 aaPredicted RBP20.81■□□□□ 0.92
CUEDC1-211ENST00000582951 U2AF1Q01081 240 aaKnown RBP eCLIP20.81■□□□□ 0.92
CUEDC1-211ENST00000582951 CADPS2Q86UW7 1296 aa20.81■□□□□ 0.92
CUEDC1-211ENST00000582951 SALL2Q9Y467 1007 aaPredicted RBP20.8■□□□□ 0.92
CUEDC1-211ENST00000582951 U2SURPO15042 1029 aaKnown RBP20.79■□□□□ 0.92
CUEDC1-211ENST00000582951 PPM1GO15355 546 aaPredicted RBP20.79■□□□□ 0.92
CUEDC1-211ENST00000582951 PSME1Q06323 249 aa20.79■□□□□ 0.92
CUEDC1-211ENST00000582951 ORAI2Q96SN7 254 aa20.79■□□□□ 0.92
CUEDC1-211ENST00000582951 APAF1O14727 1248 aa20.78■□□□□ 0.92
CUEDC1-211ENST00000582951 FBLN1P23142 703 aa20.78■□□□□ 0.92
CUEDC1-211ENST00000582951 NLRP6P59044 892 aa20.78■□□□□ 0.92
CUEDC1-211ENST00000582951 RRS1Q15050 365 aaKnown RBP20.78■□□□□ 0.92
CUEDC1-211ENST00000582951 ZNF335Q9H4Z2 1342 aaPredicted RBP20.78■□□□□ 0.92
CUEDC1-211ENST00000582951 PAK3O75914 559 aaPredicted RBP20.77■□□□□ 0.92
CUEDC1-211ENST00000582951 PNNQ9H307 717 aaKnown RBP20.77■□□□□ 0.92
CUEDC1-211ENST00000582951 ZNF521Q96K83 1311 aa20.77■□□□□ 0.91
CUEDC1-211ENST00000582951 NCBP3Q53F19 620 aaKnown RBP20.76■□□□□ 0.91
CUEDC1-211ENST00000582951 ABTB2Q8N961 1025 aa20.76■□□□□ 0.91
CUEDC1-211ENST00000582951 ALS2Q96Q42 1657 aa20.76■□□□□ 0.91
CUEDC1-211ENST00000582951 SBNO1A3KN83 1393 aa20.75■□□□□ 0.91
CUEDC1-211ENST00000582951 KIF24Q5T7B8 1368 aa20.75■□□□□ 0.91
CUEDC1-211ENST00000582951 LTN1O94822 1766 aa20.75■□□□□ 0.91
CUEDC1-211ENST00000582951 NEFLP07196 543 aa20.75■□□□□ 0.91
CUEDC1-211ENST00000582951 RGPD1P0DJD0 1748 aa20.74■□□□□ 0.91
CUEDC1-211ENST00000582951 FLT4P35916 1363 aa20.73■□□□□ 0.91
CUEDC1-211ENST00000582951 IL13P35225 146 aa20.73■□□□□ 0.91
CUEDC1-211ENST00000582951 SLIT3O75094 1523 aa20.73■□□□□ 0.91
CUEDC1-211ENST00000582951 NFAT5O94916 1531 aa20.73■□□□□ 0.91
CUEDC1-211ENST00000582951 PHRF1Q9P1Y6 1649 aaKnown RBP20.72■□□□□ 0.91
CUEDC1-211ENST00000582951 FOXO3O43524 673 aa20.72■□□□□ 0.91
CUEDC1-211ENST00000582951 TCP11L2Q8N4U5 519 aa20.72■□□□□ 0.91
CUEDC1-211ENST00000582951 MAP3K19Q56UN5 1328 aa20.72■□□□□ 0.91
CUEDC1-211ENST00000582951 MAPK8IP3Q9UPT6 1336 aa20.72■□□□□ 0.91
CUEDC1-211ENST00000582951 FCHSD2O94868 740 aa20.71■□□□□ 0.91
CUEDC1-211ENST00000582951 GOLGA2Q08379 1002 aa20.71■□□□□ 0.91
CUEDC1-211ENST00000582951 RTL1A6NKG5 1358 aa20.71■□□□□ 0.91
CUEDC1-211ENST00000582951 KRT28Q7Z3Y7 464 aa20.7■□□□□ 0.9
CUEDC1-211ENST00000582951 PLEKHF1Q96S99 279 aa20.7■□□□□ 0.9
CUEDC1-211ENST00000582951 SUPT16HQ9Y5B9 1047 aaKnown RBP20.7■□□□□ 0.9
CUEDC1-211ENST00000582951 SOX12O15370 315 aa20.69■□□□□ 0.9
CUEDC1-211ENST00000582951 CCDC27Q2M243 656 aa20.69■□□□□ 0.9
CUEDC1-211ENST00000582951 NPHP3Q7Z494 1330 aa20.69■□□□□ 0.9
CUEDC1-211ENST00000582951 NUTM2GQ5VZR2 741 aa20.68■□□□□ 0.9
CUEDC1-211ENST00000582951 CDCA7LQ96GN5 454 aa20.68■□□□□ 0.9
CUEDC1-211ENST00000582951 RSPH6AQ9H0K4 717 aa20.68■□□□□ 0.9
CUEDC1-211ENST00000582951 NEFMP07197 916 aa20.67■□□□□ 0.9
CUEDC1-211ENST00000582951 EIF4A2Q14240 407 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms