RNA–Protein interactions for RNA: ENST00000582009.5

RAB11FIP4-208, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 3

Gene RAB11FIP4, Length 596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-208ENST00000582009 USP47Q96K76 1375 aa28.68■■■□□ 2.18
RAB11FIP4-208ENST00000582009 ALS2Q96Q42 1657 aa28.67■■■□□ 2.18
RAB11FIP4-208ENST00000582009 MARF1Q9Y4F3 1742 aaKnown RBP28.67■■■□□ 2.18
RAB11FIP4-208ENST00000582009 TMC1Q8TDI8 760 aa28.67■■■□□ 2.18
RAB11FIP4-208ENST00000582009 QTRT2Q9H974 415 aaKnown RBP28.67■■■□□ 2.18
RAB11FIP4-208ENST00000582009 ABTB2Q8N961 1025 aa28.66■■■□□ 2.18
RAB11FIP4-208ENST00000582009 SOCS7O14512 581 aa28.64■■■□□ 2.18
RAB11FIP4-208ENST00000582009 SLC24A1O60721 1099 aa28.64■■■□□ 2.18
RAB11FIP4-208ENST00000582009 RXRBP28702 533 aa28.64■■■□□ 2.18
RAB11FIP4-208ENST00000582009 FNBP4Q8N3X1 1017 aaPredicted RBP28.62■■■□□ 2.17
RAB11FIP4-208ENST00000582009 TESK2Q96S53 571 aa28.62■■■□□ 2.17
RAB11FIP4-208ENST00000582009 ZNF692Q9BU19 519 aaPredicted RBP28.62■■■□□ 2.17
RAB11FIP4-208ENST00000582009 ABCA3Q99758 1704 aa28.6■■■□□ 2.17
RAB11FIP4-208ENST00000582009 TRPC5Q9UL62 973 aaPredicted RBP28.59■■■□□ 2.17
RAB11FIP4-208ENST00000582009 USP6P35125 1406 aa28.59■■■□□ 2.17
RAB11FIP4-208ENST00000582009 TMF1P82094 1093 aa28.58■■■□□ 2.17
RAB11FIP4-208ENST00000582009 NLRP13Q86W25 1043 aa28.57■■■□□ 2.16
RAB11FIP4-208ENST00000582009 BRD4O60885 1362 aaPredicted RBP28.57■■■□□ 2.16
RAB11FIP4-208ENST00000582009 RBM6P78332 1123 aaKnown RBP28.56■■■□□ 2.16
RAB11FIP4-208ENST00000582009 KTN1Q86UP2 1357 aaKnown RBP28.56■■■□□ 2.16
RAB11FIP4-208ENST00000582009 SLC12A5Q9H2X9 1139 aa28.56■■■□□ 2.16
RAB11FIP4-208ENST00000582009 FAM83GA6ND36 823 aa28.55■■■□□ 2.16
RAB11FIP4-208ENST00000582009 HDGFL2Q7Z4V5 671 aaPredicted RBP28.55■■■□□ 2.16
RAB11FIP4-208ENST00000582009 PUS7Q96PZ0 661 aaKnown RBP28.55■■■□□ 2.16
RAB11FIP4-208ENST00000582009 NLRP6P59044 892 aa28.54■■■□□ 2.16
RAB11FIP4-208ENST00000582009 UNC5CLQ8IV45 518 aa28.54■■■□□ 2.16
RAB11FIP4-208ENST00000582009 ZC3H6P61129 1189 aaKnown RBP28.53■■■□□ 2.16
RAB11FIP4-208ENST00000582009 PRDM11Q9NQV5 511 aa28.53■■■□□ 2.16
RAB11FIP4-208ENST00000582009 AKAP12Q02952 1782 aa28.52■■■□□ 2.16
RAB11FIP4-208ENST00000582009 TERF2IPQ9NYB0 399 aa28.52■■■□□ 2.16
RAB11FIP4-208ENST00000582009 BCL9LQ86UU0 1499 aa28.52■■■□□ 2.16
RAB11FIP4-208ENST00000582009 TTC21BQ7Z4L5 1316 aa28.51■■■□□ 2.15
RAB11FIP4-208ENST00000582009 CCDC9Q9Y3X0 531 aaKnown RBP28.51■■■□□ 2.15
RAB11FIP4-208ENST00000582009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.5■■■□□ 2.15
RAB11FIP4-208ENST00000582009 CRYBG1Q9Y4K1 1723 aa28.49■■■□□ 2.15
RAB11FIP4-208ENST00000582009 SLIT2O94813 1529 aa28.49■■■□□ 2.15
RAB11FIP4-208ENST00000582009 EIF4G2P78344 907 aaKnown RBP eCLIP28.49■■■□□ 2.15
RAB11FIP4-208ENST00000582009 CDCA8Q53HL2 280 aa28.49■■■□□ 2.15
RAB11FIP4-208ENST00000582009 CPSF1Q10570 1443 aaKnown RBP28.49■■■□□ 2.15
RAB11FIP4-208ENST00000582009 PLCH1Q4KWH8 1693 aa28.48■■■□□ 2.15
RAB11FIP4-208ENST00000582009 PHRF1Q9P1Y6 1649 aaKnown RBP28.48■■■□□ 2.15
RAB11FIP4-208ENST00000582009 BTG4Q9NY30 223 aa28.48■■■□□ 2.15
RAB11FIP4-208ENST00000582009 ATRNO75882 1429 aa28.48■■■□□ 2.15
RAB11FIP4-208ENST00000582009 ZBTB7CA1YPR0 619 aa28.47■■■□□ 2.15
RAB11FIP4-208ENST00000582009 CHRNA2Q15822 529 aa28.47■■■□□ 2.15
RAB11FIP4-208ENST00000582009 KIAA0232Q92628 1395 aa28.47■■■□□ 2.15
RAB11FIP4-208ENST00000582009 TTC21AQ8NDW8 1320 aa28.46■■■□□ 2.15
RAB11FIP4-208ENST00000582009 SSH2Q76I76 1423 aa28.45■■■□□ 2.15
RAB11FIP4-208ENST00000582009 COL14A1Q05707 1796 aaKnown RBP28.45■■■□□ 2.15
RAB11FIP4-208ENST00000582009 GCP02774 474 aa28.45■■■□□ 2.14
RAB11FIP4-208ENST00000582009 GJD4Q96KN9 370 aaPredicted RBP28.45■■■□□ 2.14
RAB11FIP4-208ENST00000582009 USP19O94966 1318 aa28.44■■■□□ 2.14
RAB11FIP4-208ENST00000582009 HSPA5P11021 654 aaKnown RBP28.44■■■□□ 2.14
RAB11FIP4-208ENST00000582009 POLR3GLQ9BT43 218 aa28.44■■■□□ 2.14
RAB11FIP4-208ENST00000582009 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.43■■■□□ 2.14
RAB11FIP4-208ENST00000582009 NWD2Q9ULI1 1742 aa28.43■■■□□ 2.14
RAB11FIP4-208ENST00000582009 NINLQ9Y2I6 1382 aa28.43■■■□□ 2.14
RAB11FIP4-208ENST00000582009 MON2Q7Z3U7 1717 aa28.43■■■□□ 2.14
RAB11FIP4-208ENST00000582009 CD163L1Q9NR16 1453 aa28.42■■■□□ 2.14
RAB11FIP4-208ENST00000582009 SOX12O15370 315 aa28.42■■■□□ 2.14
RAB11FIP4-208ENST00000582009 PIK3C2AO00443 1686 aa28.42■■■□□ 2.14
RAB11FIP4-208ENST00000582009 A0A1W2PP64 1363 aa28.41■■■□□ 2.14
RAB11FIP4-208ENST00000582009 CDK12Q9NYV4 1490 aaPredicted RBP28.4■■■□□ 2.14
RAB11FIP4-208ENST00000582009 VPS72Q15906 364 aa28.4■■■□□ 2.14
RAB11FIP4-208ENST00000582009 NRKQ7Z2Y5 1582 aa28.39■■■□□ 2.14
RAB11FIP4-208ENST00000582009 STRN4Q9NRL3 753 aa28.39■■■□□ 2.14
RAB11FIP4-208ENST00000582009 EVA1CP58658 441 aa28.38■■■□□ 2.13
RAB11FIP4-208ENST00000582009 NME9Q86XW9 330 aa28.38■■■□□ 2.13
RAB11FIP4-208ENST00000582009 RGS12O14924 1447 aa28.37■■■□□ 2.13
RAB11FIP4-208ENST00000582009 EDC4Q6P2E9 1401 aaKnown RBP28.37■■■□□ 2.13
RAB11FIP4-208ENST00000582009 ZRANB1Q9UGI0 708 aa28.37■■■□□ 2.13
RAB11FIP4-208ENST00000582009 KCNH5Q8NCM2 988 aa28.36■■■□□ 2.13
RAB11FIP4-208ENST00000582009 A0A0G2JS52 829 aa28.34■■■□□ 2.13
RAB11FIP4-208ENST00000582009 MYT1Q01538 1121 aa28.34■■■□□ 2.13
RAB11FIP4-208ENST00000582009 CPDO75976 1380 aa28.34■■■□□ 2.13
RAB11FIP4-208ENST00000582009 ANKRD36BQ8N2N9 1353 aa28.33■■■□□ 2.13
RAB11FIP4-208ENST00000582009 SLIT3O75094 1523 aa28.33■■■□□ 2.13
RAB11FIP4-208ENST00000582009 NRAPQ86VF7 1730 aa28.32■■■□□ 2.12
RAB11FIP4-208ENST00000582009 GLI3P10071 1580 aa28.31■■■□□ 2.12
RAB11FIP4-208ENST00000582009 USP31Q70CQ4 1352 aa28.28■■■□□ 2.12
RAB11FIP4-208ENST00000582009 FAM98CQ17RN3 349 aaKnown RBP28.27■■■□□ 2.12
RAB11FIP4-208ENST00000582009 USP35Q9P2H5 1018 aa28.27■■■□□ 2.12
RAB11FIP4-208ENST00000582009 CAMTA1Q9Y6Y1 1673 aa28.26■■■□□ 2.12
RAB11FIP4-208ENST00000582009 SPATA31A5Q5VU36 1347 aa28.26■■■□□ 2.11
RAB11FIP4-208ENST00000582009 SPATA31A7Q8IWB4 1347 aa28.26■■■□□ 2.11
RAB11FIP4-208ENST00000582009 SEPT12Q8IYM1 358 aa28.26■■■□□ 2.11
RAB11FIP4-208ENST00000582009 ARHGEF25Q86VW2 580 aa28.25■■■□□ 2.11
RAB11FIP4-208ENST00000582009 COG3Q96JB2 828 aa28.25■■■□□ 2.11
RAB11FIP4-208ENST00000582009 AATKQ6ZMQ8 1374 aa28.24■■■□□ 2.11
RAB11FIP4-208ENST00000582009 LARP1Q6PKG0 1096 aaKnown RBP28.23■■■□□ 2.11
RAB11FIP4-208ENST00000582009 MYOM1P52179 1685 aa28.22■■■□□ 2.11
RAB11FIP4-208ENST00000582009 LMO7Q8WWI1 1683 aa28.22■■■□□ 2.11
RAB11FIP4-208ENST00000582009 SPATA31A1Q5TZJ5 1347 aa28.2■■■□□ 2.11
RAB11FIP4-208ENST00000582009 GGNBP2Q9H3C7 697 aa28.2■■■□□ 2.1
RAB11FIP4-208ENST00000582009 NFAT5O94916 1531 aa28.19■■■□□ 2.1
RAB11FIP4-208ENST00000582009 ONECUT3O60422 494 aaPredicted RBP28.19■■■□□ 2.1
RAB11FIP4-208ENST00000582009 CSB-PGBD3P0DP91 1061 aa28.19■■■□□ 2.1
RAB11FIP4-208ENST00000582009 UPF1Q92900 1129 aaKnown RBP eCLIP28.19■■■□□ 2.1
RAB11FIP4-208ENST00000582009 AXIN2Q9Y2T1 843 aa28.19■■■□□ 2.1
RAB11FIP4-208ENST00000582009 USP54Q70EL1 1684 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms