RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 NWD2Q9ULI1 1742 aa17.94■□□□□ 0.46
CDK5RAP3-222ENST00000581708 ACEP12821 1306 aa17.94■□□□□ 0.46
CDK5RAP3-222ENST00000581708 RALGAPBQ86X10 1494 aa17.94■□□□□ 0.46
CDK5RAP3-222ENST00000581708 RGS12O14924 1447 aa17.92■□□□□ 0.46
CDK5RAP3-222ENST00000581708 PPIP5K1Q6PFW1 1433 aa17.92■□□□□ 0.46
CDK5RAP3-222ENST00000581708 PAK3O75914 559 aaPredicted RBP17.92■□□□□ 0.46
CDK5RAP3-222ENST00000581708 CABLES1Q8TDN4 633 aa17.92■□□□□ 0.46
CDK5RAP3-222ENST00000581708 CLSPNQ9HAW4 1339 aa17.92■□□□□ 0.46
CDK5RAP3-222ENST00000581708 GJD4Q96KN9 370 aaPredicted RBP17.91■□□□□ 0.46
CDK5RAP3-222ENST00000581708 CARD11Q9BXL7 1154 aa17.9■□□□□ 0.46
CDK5RAP3-222ENST00000581708 CABP2Q9NPB3 220 aa17.9■□□□□ 0.46
CDK5RAP3-222ENST00000581708 SLC24A1O60721 1099 aa17.89■□□□□ 0.45
CDK5RAP3-222ENST00000581708 TIMELESSQ9UNS1 1208 aa17.89■□□□□ 0.45
CDK5RAP3-222ENST00000581708 CRYBG1Q9Y4K1 1723 aa17.89■□□□□ 0.45
CDK5RAP3-222ENST00000581708 PLCH1Q4KWH8 1693 aa17.88■□□□□ 0.45
CDK5RAP3-222ENST00000581708 VPS72Q15906 364 aa17.88■□□□□ 0.45
CDK5RAP3-222ENST00000581708 COL14A1Q05707 1796 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP3-222ENST00000581708 ATAD2Q6PL18 1390 aa17.88■□□□□ 0.45
CDK5RAP3-222ENST00000581708 FAM83GA6ND36 823 aa17.87■□□□□ 0.45
CDK5RAP3-222ENST00000581708 UPF1Q92900 1129 aaKnown RBP eCLIP17.87■□□□□ 0.45
CDK5RAP3-222ENST00000581708 PUS7Q96PZ0 661 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP3-222ENST00000581708 ZNF692Q9BU19 519 aaPredicted RBP17.86■□□□□ 0.45
CDK5RAP3-222ENST00000581708 CABP1Q9NZU7 370 aa17.86■□□□□ 0.45
CDK5RAP3-222ENST00000581708 USP6P35125 1406 aa17.85■□□□□ 0.45
CDK5RAP3-222ENST00000581708 ABTB2Q8N961 1025 aa17.85■□□□□ 0.45
CDK5RAP3-222ENST00000581708 ONECUT3O60422 494 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-222ENST00000581708 NLRP13Q86W25 1043 aa17.84■□□□□ 0.45
CDK5RAP3-222ENST00000581708 PHRF1Q9P1Y6 1649 aaKnown RBP17.83■□□□□ 0.45
CDK5RAP3-222ENST00000581708 USP19O94966 1318 aa17.83■□□□□ 0.44
CDK5RAP3-222ENST00000581708 GLI3P10071 1580 aa17.83■□□□□ 0.44
CDK5RAP3-222ENST00000581708 PLEKHG5O94827 1062 aa17.82■□□□□ 0.44
CDK5RAP3-222ENST00000581708 PRDM11Q9NQV5 511 aa17.82■□□□□ 0.44
CDK5RAP3-222ENST00000581708 BTG4Q9NY30 223 aa17.82■□□□□ 0.44
CDK5RAP3-222ENST00000581708 SSH2Q76I76 1423 aa17.81■□□□□ 0.44
CDK5RAP3-222ENST00000581708 NRAPQ86VF7 1730 aa17.81■□□□□ 0.44
CDK5RAP3-222ENST00000581708 CPDO75976 1380 aa17.81■□□□□ 0.44
CDK5RAP3-222ENST00000581708 CPSF1Q10570 1443 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-222ENST00000581708 KIAA0232Q92628 1395 aa17.79■□□□□ 0.44
CDK5RAP3-222ENST00000581708 CCDC125Q86Z20 511 aa17.79■□□□□ 0.44
CDK5RAP3-222ENST00000581708 TTC21AQ8NDW8 1320 aa17.78■□□□□ 0.44
CDK5RAP3-222ENST00000581708 CCDC9Q9Y3X0 531 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-222ENST00000581708 AKAP12Q02952 1782 aa17.78■□□□□ 0.44
CDK5RAP3-222ENST00000581708 NRKQ7Z2Y5 1582 aa17.78■□□□□ 0.44
CDK5RAP3-222ENST00000581708 GCP02774 474 aa17.77■□□□□ 0.44
CDK5RAP3-222ENST00000581708 NUTM2GQ5VZR2 741 aa17.76■□□□□ 0.43
CDK5RAP3-222ENST00000581708 NINLQ9Y2I6 1382 aa17.76■□□□□ 0.43
CDK5RAP3-222ENST00000581708 SPATA31A5Q5VU36 1347 aa17.75■□□□□ 0.43
CDK5RAP3-222ENST00000581708 SPATA31A7Q8IWB4 1347 aa17.75■□□□□ 0.43
CDK5RAP3-222ENST00000581708 NLRP6P59044 892 aa17.75■□□□□ 0.43
CDK5RAP3-222ENST00000581708 ZC3H6P61129 1189 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-222ENST00000581708 SEPT12Q8IYM1 358 aa17.75■□□□□ 0.43
CDK5RAP3-222ENST00000581708 PCGF6Q9BYE7 350 aa17.75■□□□□ 0.43
CDK5RAP3-222ENST00000581708 SLIT3O75094 1523 aa17.75■□□□□ 0.43
CDK5RAP3-222ENST00000581708 KTN1Q86UP2 1357 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-222ENST00000581708 TTC21BQ7Z4L5 1316 aa17.74■□□□□ 0.43
CDK5RAP3-222ENST00000581708 TESK2Q96S53 571 aa17.74■□□□□ 0.43
CDK5RAP3-222ENST00000581708 EP400Q96L91 3159 aa17.74■□□□□ 0.43
CDK5RAP3-222ENST00000581708 ST20-MTHFSA0A0A6YYL1 179 aa17.73■□□□□ 0.43
CDK5RAP3-222ENST00000581708 KCNH5Q8NCM2 988 aa17.73■□□□□ 0.43
CDK5RAP3-222ENST00000581708 PIK3C2AO00443 1686 aa17.73■□□□□ 0.43
CDK5RAP3-222ENST00000581708 MON2Q7Z3U7 1717 aa17.72■□□□□ 0.43
CDK5RAP3-222ENST00000581708 LMO7Q8WWI1 1683 aa17.72■□□□□ 0.43
CDK5RAP3-222ENST00000581708 CHRNA2Q15822 529 aa17.72■□□□□ 0.43
CDK5RAP3-222ENST00000581708 HDGFL2Q7Z4V5 671 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-222ENST00000581708 TERF2IPQ9NYB0 399 aa17.72■□□□□ 0.43
CDK5RAP3-222ENST00000581708 AATKQ6ZMQ8 1374 aa17.71■□□□□ 0.43
CDK5RAP3-222ENST00000581708 SPATA31A1Q5TZJ5 1347 aa17.71■□□□□ 0.42
CDK5RAP3-222ENST00000581708 BRWD3Q6RI45 1802 aa17.7■□□□□ 0.42
CDK5RAP3-222ENST00000581708 EVA1CP58658 441 aa17.7■□□□□ 0.42
CDK5RAP3-222ENST00000581708 KRT27Q7Z3Y8 459 aa17.7■□□□□ 0.42
CDK5RAP3-222ENST00000581708 CAMTA1Q9Y6Y1 1673 aa17.7■□□□□ 0.42
CDK5RAP3-222ENST00000581708 CD163L1Q9NR16 1453 aa17.69■□□□□ 0.42
CDK5RAP3-222ENST00000581708 USP31Q70CQ4 1352 aa17.69■□□□□ 0.42
CDK5RAP3-222ENST00000581708 USP47Q96K76 1375 aa17.69■□□□□ 0.42
CDK5RAP3-222ENST00000581708 FAM98CQ17RN3 349 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-222ENST00000581708 TMC1Q8TDI8 760 aa17.69■□□□□ 0.42
CDK5RAP3-222ENST00000581708 EDC4Q6P2E9 1401 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-222ENST00000581708 USP54Q70EL1 1684 aa17.68■□□□□ 0.42
CDK5RAP3-222ENST00000581708 BLMP54132 1417 aaPredicted RBP17.68■□□□□ 0.42
CDK5RAP3-222ENST00000581708 TMF1P82094 1093 aa17.68■□□□□ 0.42
CDK5RAP3-222ENST00000581708 CDCA8Q53HL2 280 aa17.68■□□□□ 0.42
CDK5RAP3-222ENST00000581708 BARGINQ6ZT62 677 aa17.68■□□□□ 0.42
CDK5RAP3-222ENST00000581708 THRAP3Q9Y2W1 955 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP3-222ENST00000581708 THSD7AQ9UPZ6 1657 aa17.67■□□□□ 0.42
CDK5RAP3-222ENST00000581708 SLC12A5Q9H2X9 1139 aa17.67■□□□□ 0.42
CDK5RAP3-222ENST00000581708 STRN4Q9NRL3 753 aa17.67■□□□□ 0.42
CDK5RAP3-222ENST00000581708 ABCC6O95255 1503 aa17.67■□□□□ 0.42
CDK5RAP3-222ENST00000581708 A0A0G2JS52 829 aa17.66■□□□□ 0.42
CDK5RAP3-222ENST00000581708 MYT1Q01538 1121 aa17.66■□□□□ 0.42
CDK5RAP3-222ENST00000581708 ARHGEF25Q86VW2 580 aa17.66■□□□□ 0.42
CDK5RAP3-222ENST00000581708 COL5A2P05997 1499 aaPredicted RBP17.66■□□□□ 0.42
CDK5RAP3-222ENST00000581708 A0A1W2PP64 1363 aa17.65■□□□□ 0.42
CDK5RAP3-222ENST00000581708 TCP11L2Q8N4U5 519 aa17.64■□□□□ 0.41
CDK5RAP3-222ENST00000581708 CCER1Q8TC90 406 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-222ENST00000581708 CRB1P82279 1406 aa17.64■□□□□ 0.41
CDK5RAP3-222ENST00000581708 LARP1Q6PKG0 1096 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-222ENST00000581708 COL18A1P39060 1754 aa17.63■□□□□ 0.41
CDK5RAP3-222ENST00000581708 NFAT5O94916 1531 aa17.62■□□□□ 0.41
CDK5RAP3-222ENST00000581708 SF3B2Q13435 895 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP3-222ENST00000581708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms