RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ADAMTS2O95450 1211 aa17.8■□□□□ 0.44
SNORD55-201ENST00000581525 USP6P35125 1406 aa17.8■□□□□ 0.44
SNORD55-201ENST00000581525 NGLY1Q96IV0 654 aa17.79■□□□□ 0.44
SNORD55-201ENST00000581525 CABLES1Q8TDN4 633 aa17.78■□□□□ 0.44
SNORD55-201ENST00000581525 C8orf37Q96NL8 207 aa17.78■□□□□ 0.44
SNORD55-201ENST00000581525 PAK3O75914 559 aaPredicted RBP17.77■□□□□ 0.44
SNORD55-201ENST00000581525 SLIT2O94813 1529 aa17.77■□□□□ 0.43
SNORD55-201ENST00000581525 BCL9LQ86UU0 1499 aa17.76■□□□□ 0.43
SNORD55-201ENST00000581525 CD163L1Q9NR16 1453 aa17.76■□□□□ 0.43
SNORD55-201ENST00000581525 USP19O94966 1318 aa17.76■□□□□ 0.43
SNORD55-201ENST00000581525 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
SNORD55-201ENST00000581525 NINLQ9Y2I6 1382 aa17.76■□□□□ 0.43
SNORD55-201ENST00000581525 TMF1P82094 1093 aa17.75■□□□□ 0.43
SNORD55-201ENST00000581525 QTRT2Q9H974 415 aaKnown RBP17.75■□□□□ 0.43
SNORD55-201ENST00000581525 TTC21BQ7Z4L5 1316 aa17.74■□□□□ 0.43
SNORD55-201ENST00000581525 FAM83GA6ND36 823 aa17.74■□□□□ 0.43
SNORD55-201ENST00000581525 ABTB2Q8N961 1025 aa17.74■□□□□ 0.43
SNORD55-201ENST00000581525 SLC12A5Q9H2X9 1139 aa17.74■□□□□ 0.43
SNORD55-201ENST00000581525 MARF1Q9Y4F3 1742 aaKnown RBP17.74■□□□□ 0.43
SNORD55-201ENST00000581525 CRYBG1Q9Y4K1 1723 aa17.74■□□□□ 0.43
SNORD55-201ENST00000581525 TTC21AQ8NDW8 1320 aa17.73■□□□□ 0.43
SNORD55-201ENST00000581525 NLRP13Q86W25 1043 aa17.73■□□□□ 0.43
SNORD55-201ENST00000581525 USP21Q9UK80 565 aa17.73■□□□□ 0.43
SNORD55-201ENST00000581525 ABCA3Q99758 1704 aa17.72■□□□□ 0.43
SNORD55-201ENST00000581525 SOCS7O14512 581 aa17.72■□□□□ 0.43
SNORD55-201ENST00000581525 EIF4G2P78344 907 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNORD55-201ENST00000581525 CDCA8Q53HL2 280 aa17.72■□□□□ 0.43
SNORD55-201ENST00000581525 ATRNO75882 1429 aa17.72■□□□□ 0.43
SNORD55-201ENST00000581525 AKAP12Q02952 1782 aa17.71■□□□□ 0.43
SNORD55-201ENST00000581525 CDK12Q9NYV4 1490 aaPredicted RBP17.71■□□□□ 0.43
SNORD55-201ENST00000581525 KTN1Q86UP2 1357 aaKnown RBP17.71■□□□□ 0.43
SNORD55-201ENST00000581525 RXRBP28702 533 aa17.71■□□□□ 0.43
SNORD55-201ENST00000581525 RBM6P78332 1123 aaKnown RBP17.71■□□□□ 0.43
SNORD55-201ENST00000581525 UNC5CLQ8IV45 518 aa17.71■□□□□ 0.43
SNORD55-201ENST00000581525 TRPC5Q9UL62 973 aaPredicted RBP17.71■□□□□ 0.43
SNORD55-201ENST00000581525 TERF2IPQ9NYB0 399 aa17.7■□□□□ 0.42
SNORD55-201ENST00000581525 CPDO75976 1380 aa17.69■□□□□ 0.42
SNORD55-201ENST00000581525 USP31Q70CQ4 1352 aa17.69■□□□□ 0.42
SNORD55-201ENST00000581525 GCP02774 474 aa17.69■□□□□ 0.42
SNORD55-201ENST00000581525 HSPA5P11021 654 aaKnown RBP17.69■□□□□ 0.42
SNORD55-201ENST00000581525 HAP1P54257 671 aaPredicted RBP17.69■□□□□ 0.42
SNORD55-201ENST00000581525 HDGFL2Q7Z4V5 671 aaPredicted RBP17.69■□□□□ 0.42
SNORD55-201ENST00000581525 NUTM2GQ5VZR2 741 aa17.68■□□□□ 0.42
SNORD55-201ENST00000581525 A0A1W2PP64 1363 aa17.67■□□□□ 0.42
SNORD55-201ENST00000581525 NRKQ7Z2Y5 1582 aa17.67■□□□□ 0.42
SNORD55-201ENST00000581525 EDC4Q6P2E9 1401 aaKnown RBP17.67■□□□□ 0.42
SNORD55-201ENST00000581525 NLRP6P59044 892 aa17.67■□□□□ 0.42
SNORD55-201ENST00000581525 TMC1Q8TDI8 760 aa17.67■□□□□ 0.42
SNORD55-201ENST00000581525 SLIT3O75094 1523 aa17.67■□□□□ 0.42
SNORD55-201ENST00000581525 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.67■□□□□ 0.42
SNORD55-201ENST00000581525 VPS72Q15906 364 aa17.66■□□□□ 0.42
SNORD55-201ENST00000581525 MON2Q7Z3U7 1717 aa17.66■□□□□ 0.42
SNORD55-201ENST00000581525 ANKRD36BQ8N2N9 1353 aa17.66■□□□□ 0.42
SNORD55-201ENST00000581525 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
SNORD55-201ENST00000581525 NWD2Q9ULI1 1742 aa17.65■□□□□ 0.42
SNORD55-201ENST00000581525 ONECUT3O60422 494 aaPredicted RBP17.65■□□□□ 0.42
SNORD55-201ENST00000581525 GJD4Q96KN9 370 aaPredicted RBP17.65■□□□□ 0.42
SNORD55-201ENST00000581525 KIAA0232Q92628 1395 aa17.65■□□□□ 0.42
SNORD55-201ENST00000581525 PIK3C2AO00443 1686 aa17.64■□□□□ 0.42
SNORD55-201ENST00000581525 COL14A1Q05707 1796 aaKnown RBP17.64■□□□□ 0.41
SNORD55-201ENST00000581525 KCNH5Q8NCM2 988 aa17.63■□□□□ 0.41
SNORD55-201ENST00000581525 PRDM11Q9NQV5 511 aa17.63■□□□□ 0.41
SNORD55-201ENST00000581525 BTG4Q9NY30 223 aa17.63■□□□□ 0.41
SNORD55-201ENST00000581525 USP54Q70EL1 1684 aa17.62■□□□□ 0.41
SNORD55-201ENST00000581525 ZC3H6P61129 1189 aaKnown RBP17.62■□□□□ 0.41
SNORD55-201ENST00000581525 ARHGEF25Q86VW2 580 aa17.61■□□□□ 0.41
SNORD55-201ENST00000581525 AATKQ6ZMQ8 1374 aa17.61■□□□□ 0.41
SNORD55-201ENST00000581525 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
SNORD55-201ENST00000581525 PLCH1Q4KWH8 1693 aa17.6■□□□□ 0.41
SNORD55-201ENST00000581525 NME9Q86XW9 330 aa17.59■□□□□ 0.41
SNORD55-201ENST00000581525 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNORD55-201ENST00000581525 ZRANB1Q9UGI0 708 aa17.59■□□□□ 0.41
SNORD55-201ENST00000581525 NRAPQ86VF7 1730 aa17.58■□□□□ 0.41
SNORD55-201ENST00000581525 OVOS2A0A0J9YW53 1432 aa17.58■□□□□ 0.41
SNORD55-201ENST00000581525 RGS12O14924 1447 aa17.58■□□□□ 0.41
SNORD55-201ENST00000581525 OVOS2Q6IE36 1432 aa17.58■□□□□ 0.41
SNORD55-201ENST00000581525 C11orf95C9JLR9 678 aaPredicted RBP17.58■□□□□ 0.4
SNORD55-201ENST00000581525 CHRNA2Q15822 529 aa17.58■□□□□ 0.4
SNORD55-201ENST00000581525 CARD14Q9BXL6 1004 aa17.58■□□□□ 0.4
SNORD55-201ENST00000581525 LMO7Q8WWI1 1683 aa17.58■□□□□ 0.4
SNORD55-201ENST00000581525 CAMTA1Q9Y6Y1 1673 aa17.58■□□□□ 0.4
SNORD55-201ENST00000581525 GLI3P10071 1580 aa17.57■□□□□ 0.4
SNORD55-201ENST00000581525 SPATA31A5Q5VU36 1347 aa17.57■□□□□ 0.4
SNORD55-201ENST00000581525 SPATA31A7Q8IWB4 1347 aa17.57■□□□□ 0.4
SNORD55-201ENST00000581525 FYB1O15117 783 aa17.57■□□□□ 0.4
SNORD55-201ENST00000581525 NFAT5O94916 1531 aa17.57■□□□□ 0.4
SNORD55-201ENST00000581525 MYOM1P52179 1685 aa17.55■□□□□ 0.4
SNORD55-201ENST00000581525 COL18A1P39060 1754 aa17.54■□□□□ 0.4
SNORD55-201ENST00000581525 AXIN2Q9Y2T1 843 aa17.54■□□□□ 0.4
SNORD55-201ENST00000581525 SPATA31A1Q5TZJ5 1347 aa17.53■□□□□ 0.4
SNORD55-201ENST00000581525 ABCC6O95255 1503 aa17.53■□□□□ 0.4
SNORD55-201ENST00000581525 COL5A2P05997 1499 aaPredicted RBP17.51■□□□□ 0.39
SNORD55-201ENST00000581525 BARGINQ6ZT62 677 aa17.51■□□□□ 0.39
SNORD55-201ENST00000581525 COG3Q96JB2 828 aa17.51■□□□□ 0.39
SNORD55-201ENST00000581525 LARP1Q6PKG0 1096 aaKnown RBP17.5■□□□□ 0.39
SNORD55-201ENST00000581525 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
SNORD55-201ENST00000581525 EVA1CP58658 441 aa17.49■□□□□ 0.39
SNORD55-201ENST00000581525 SEPT12Q8IYM1 358 aa17.49■□□□□ 0.39
SNORD55-201ENST00000581525 KIF7Q2M1P5 1343 aa17.48■□□□□ 0.39
SNORD55-201ENST00000581525 UPF1Q92900 1129 aaKnown RBP eCLIP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms