RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 CCDC61Q9Y6R9 512 aa18.01■□□□□ 0.47
SENP3-204ENST00000580997 ALS2Q96Q42 1657 aa18.01■□□□□ 0.47
SENP3-204ENST00000580997 PLEKHG3A1L390 1219 aa18■□□□□ 0.47
SENP3-204ENST00000580997 RALGAPBQ86X10 1494 aa18■□□□□ 0.47
SENP3-204ENST00000580997 ABCA3Q99758 1704 aa17.99■□□□□ 0.47
SENP3-204ENST00000580997 ONECUT3O60422 494 aaPredicted RBP17.99■□□□□ 0.47
SENP3-204ENST00000580997 POLR3AO14802 1390 aaPredicted RBP17.99■□□□□ 0.47
SENP3-204ENST00000580997 PLEKHG5O94827 1062 aa17.98■□□□□ 0.47
SENP3-204ENST00000580997 GLI3P10071 1580 aa17.98■□□□□ 0.47
SENP3-204ENST00000580997 CENPJQ9HC77 1338 aaPredicted RBP17.98■□□□□ 0.47
SENP3-204ENST00000580997 PAK3O75914 559 aaPredicted RBP17.97■□□□□ 0.47
SENP3-204ENST00000580997 NBPF8Q3BBV2 869 aa17.97■□□□□ 0.47
SENP3-204ENST00000580997 ITSN1Q15811 1721 aa17.97■□□□□ 0.47
SENP3-204ENST00000580997 NWD2Q9ULI1 1742 aa17.97■□□□□ 0.47
SENP3-204ENST00000580997 ACEP12821 1306 aa17.96■□□□□ 0.46
SENP3-204ENST00000580997 PLCH1Q4KWH8 1693 aa17.94■□□□□ 0.46
SENP3-204ENST00000580997 TOPAZ1Q8N9V7 1692 aa17.94■□□□□ 0.46
SENP3-204ENST00000580997 NEUROD1Q13562 356 aa17.94■□□□□ 0.46
SENP3-204ENST00000580997 CCDC125Q86Z20 511 aa17.94■□□□□ 0.46
SENP3-204ENST00000580997 BTG4Q9NY30 223 aa17.93■□□□□ 0.46
SENP3-204ENST00000580997 CRYBG1Q9Y4K1 1723 aa17.92■□□□□ 0.46
SENP3-204ENST00000580997 SRPK2P78362 688 aaKnown RBP17.92■□□□□ 0.46
SENP3-204ENST00000580997 SEPT12Q8IYM1 358 aa17.92■□□□□ 0.46
SENP3-204ENST00000580997 CABP2Q9NPB3 220 aa17.91■□□□□ 0.46
SENP3-204ENST00000580997 COL14A1Q05707 1796 aaKnown RBP17.91■□□□□ 0.46
SENP3-204ENST00000580997 TRPM1Q7Z4N2 1603 aa17.9■□□□□ 0.46
SENP3-204ENST00000580997 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.46
SENP3-204ENST00000580997 PRDM11Q9NQV5 511 aa17.89■□□□□ 0.45
SENP3-204ENST00000580997 RNF216Q9NWF9 866 aaPredicted RBP17.89■□□□□ 0.45
SENP3-204ENST00000580997 CCDC9Q9Y3X0 531 aaKnown RBP17.89■□□□□ 0.45
SENP3-204ENST00000580997 NRAPQ86VF7 1730 aa17.88■□□□□ 0.45
SENP3-204ENST00000580997 BRD4O60885 1362 aaPredicted RBP17.88■□□□□ 0.45
SENP3-204ENST00000580997 ROCK2O75116 1388 aaKnown RBP17.88■□□□□ 0.45
SENP3-204ENST00000580997 ABTB2Q8N961 1025 aa17.87■□□□□ 0.45
SENP3-204ENST00000580997 CABP1Q9NZU7 370 aa17.87■□□□□ 0.45
SENP3-204ENST00000580997 SPATA31A5Q5VU36 1347 aa17.87■□□□□ 0.45
SENP3-204ENST00000580997 SPATA31A7Q8IWB4 1347 aa17.87■□□□□ 0.45
SENP3-204ENST00000580997 KIAA0232Q92628 1395 aa17.87■□□□□ 0.45
SENP3-204ENST00000580997 QRICH2Q9H0J4 1663 aa17.87■□□□□ 0.45
SENP3-204ENST00000580997 NUTM2GQ5VZR2 741 aa17.86■□□□□ 0.45
SENP3-204ENST00000580997 KRT27Q7Z3Y8 459 aa17.86■□□□□ 0.45
SENP3-204ENST00000580997 EVC2Q86UK5 1308 aa17.86■□□□□ 0.45
SENP3-204ENST00000580997 SRCAPQ6ZRS2 3230 aa17.85■□□□□ 0.45
SENP3-204ENST00000580997 USP19O94966 1318 aa17.85■□□□□ 0.45
SENP3-204ENST00000580997 BLMP54132 1417 aaPredicted RBP17.84■□□□□ 0.45
SENP3-204ENST00000580997 ZC3H6P61129 1189 aaKnown RBP17.84■□□□□ 0.45
SENP3-204ENST00000580997 FAM98CQ17RN3 349 aaKnown RBP17.84■□□□□ 0.45
SENP3-204ENST00000580997 BRWD3Q6RI45 1802 aa17.84■□□□□ 0.45
SENP3-204ENST00000580997 PHRF1Q9P1Y6 1649 aaKnown RBP17.83■□□□□ 0.45
SENP3-204ENST00000580997 CPDO75976 1380 aa17.83■□□□□ 0.45
SENP3-204ENST00000580997 CHRNA2Q15822 529 aa17.83■□□□□ 0.44
SENP3-204ENST00000580997 NLRP13Q86W25 1043 aa17.83■□□□□ 0.44
SENP3-204ENST00000580997 USP6P35125 1406 aa17.82■□□□□ 0.44
SENP3-204ENST00000580997 SSH2Q76I76 1423 aa17.82■□□□□ 0.44
SENP3-204ENST00000580997 SPATA31A1Q5TZJ5 1347 aa17.81■□□□□ 0.44
SENP3-204ENST00000580997 GCP02774 474 aa17.81■□□□□ 0.44
SENP3-204ENST00000580997 TRIM26Q12899 539 aaPredicted RBP17.81■□□□□ 0.44
SENP3-204ENST00000580997 SBNO2Q9Y2G9 1366 aa17.8■□□□□ 0.44
SENP3-204ENST00000580997 NRKQ7Z2Y5 1582 aa17.79■□□□□ 0.44
SENP3-204ENST00000580997 ZNF692Q9BU19 519 aaPredicted RBP17.79■□□□□ 0.44
SENP3-204ENST00000580997 CAMTA1Q9Y6Y1 1673 aa17.77■□□□□ 0.44
SENP3-204ENST00000580997 A0A0G2JS52 829 aa17.77■□□□□ 0.44
SENP3-204ENST00000580997 NLRP6P59044 892 aa17.77■□□□□ 0.44
SENP3-204ENST00000580997 MYT1Q01538 1121 aa17.77■□□□□ 0.44
SENP3-204ENST00000580997 CARD11Q9BXL7 1154 aa17.77■□□□□ 0.44
SENP3-204ENST00000580997 STRN4Q9NRL3 753 aa17.77■□□□□ 0.44
SENP3-204ENST00000580997 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
SENP3-204ENST00000580997 TONSLQ96HA7 1378 aa17.77■□□□□ 0.43
SENP3-204ENST00000580997 THSD7AQ9UPZ6 1657 aa17.77■□□□□ 0.43
SENP3-204ENST00000580997 CPSF1Q10570 1443 aaKnown RBP17.76■□□□□ 0.43
SENP3-204ENST00000580997 EVA1CP58658 441 aa17.76■□□□□ 0.43
SENP3-204ENST00000580997 BARGINQ6ZT62 677 aa17.76■□□□□ 0.43
SENP3-204ENST00000580997 LMO7Q8WWI1 1683 aa17.76■□□□□ 0.43
SENP3-204ENST00000580997 SF3B2Q13435 895 aaKnown RBP17.75■□□□□ 0.43
SENP3-204ENST00000580997 DEFB132Q7Z7B7 95 aa17.75■□□□□ 0.43
SENP3-204ENST00000580997 SLIT3O75094 1523 aa17.74■□□□□ 0.43
SENP3-204ENST00000580997 LARP1Q6PKG0 1096 aaKnown RBP17.74■□□□□ 0.43
SENP3-204ENST00000580997 TTC21BQ7Z4L5 1316 aa17.73■□□□□ 0.43
SENP3-204ENST00000580997 TTC21AQ8NDW8 1320 aa17.72■□□□□ 0.43
SENP3-204ENST00000580997 AATKQ6ZMQ8 1374 aa17.72■□□□□ 0.43
SENP3-204ENST00000580997 THRAP3Q9Y2W1 955 aaKnown RBP17.72■□□□□ 0.43
SENP3-204ENST00000580997 PIK3C2AO00443 1686 aa17.71■□□□□ 0.43
SENP3-204ENST00000580997 COL5A2P05997 1499 aaPredicted RBP17.71■□□□□ 0.43
SENP3-204ENST00000580997 FAM182BQ5T319 152 aa17.71■□□□□ 0.43
SENP3-204ENST00000580997 TCP11L2Q8N4U5 519 aa17.71■□□□□ 0.43
SENP3-204ENST00000580997 PUS7Q96PZ0 661 aaKnown RBP17.71■□□□□ 0.43
SENP3-204ENST00000580997 USP35Q9P2H5 1018 aa17.71■□□□□ 0.43
SENP3-204ENST00000580997 KTN1Q86UP2 1357 aaKnown RBP17.69■□□□□ 0.42
SENP3-204ENST00000580997 FAM196AQ6ZSG2 479 aa17.69■□□□□ 0.42
SENP3-204ENST00000580997 ARHGEF25Q86VW2 580 aa17.69■□□□□ 0.42
SENP3-204ENST00000580997 KCNH5Q8NCM2 988 aa17.69■□□□□ 0.42
SENP3-204ENST00000580997 AKAP12Q02952 1782 aa17.68■□□□□ 0.42
SENP3-204ENST00000580997 BAG6P46379 1132 aa17.68■□□□□ 0.42
SENP3-204ENST00000580997 CNKSR2Q8WXI2 1034 aa17.68■□□□□ 0.42
SENP3-204ENST00000580997 CRB1P82279 1406 aa17.67■□□□□ 0.42
SENP3-204ENST00000580997 AXIN2Q9Y2T1 843 aa17.67■□□□□ 0.42
SENP3-204ENST00000580997 CD163L1Q9NR16 1453 aa17.67■□□□□ 0.42
SENP3-204ENST00000580997 PDE3BQ13370 1112 aa17.66■□□□□ 0.42
SENP3-204ENST00000580997 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
SENP3-204ENST00000580997 TESK2Q96S53 571 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms