RNA–Protein interactions for RNA: ENST00000580948.1

LINC00511-211, long intergenic non-protein coding RNA 511, humanhuman

TSL 3

Gene LINC00511, Length 475 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-211ENST00000580948 EIF3AQ14152 1382 aaKnown RBP13.16□□□□□ -0.3
LINC00511-211ENST00000580948 GLI3P10071 1580 aa13.15□□□□□ -0.3
LINC00511-211ENST00000580948 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.3
LINC00511-211ENST00000580948 LMOD2Q6P5Q4 547 aa13.15□□□□□ -0.3
LINC00511-211ENST00000580948 PMFBP1Q8TBY8 1022 aa13.15□□□□□ -0.3
LINC00511-211ENST00000580948 CDK19Q9BWU1 502 aa13.15□□□□□ -0.3
LINC00511-211ENST00000580948 PHF8Q9UPP1 1060 aa13.15□□□□□ -0.3
LINC00511-211ENST00000580948 ATP7BP35670 1465 aa13.15□□□□□ -0.3
LINC00511-211ENST00000580948 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.13□□□□□ -0.31
LINC00511-211ENST00000580948 NUDT16Q96DE0 195 aaKnown RBP13.13□□□□□ -0.31
LINC00511-211ENST00000580948 MARF1Q9Y4F3 1742 aaKnown RBP13.13□□□□□ -0.31
LINC00511-211ENST00000580948 LRP5O75197 1615 aa13.13□□□□□ -0.31
LINC00511-211ENST00000580948 QRICH2Q9H0J4 1663 aa13.12□□□□□ -0.31
LINC00511-211ENST00000580948 KIF1AQ12756 1690 aa13.12□□□□□ -0.31
LINC00511-211ENST00000580948 SBNO2Q9Y2G9 1366 aa13.11□□□□□ -0.31
LINC00511-211ENST00000580948 EN1Q05925 392 aaPredicted RBP13.1□□□□□ -0.31
LINC00511-211ENST00000580948 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
LINC00511-211ENST00000580948 FAM83GA6ND36 823 aa13.09□□□□□ -0.31
LINC00511-211ENST00000580948 SRPK2P78362 688 aaKnown RBP13.09□□□□□ -0.31
LINC00511-211ENST00000580948 R3HDM1Q15032 1099 aaKnown RBP13.09□□□□□ -0.31
LINC00511-211ENST00000580948 TNS3Q68CZ2 1445 aa13.09□□□□□ -0.31
LINC00511-211ENST00000580948 CABP2Q9NPB3 220 aa13.09□□□□□ -0.31
LINC00511-211ENST00000580948 CCDC61Q9Y6R9 512 aa13.09□□□□□ -0.31
LINC00511-211ENST00000580948 EVC2Q86UK5 1308 aa13.09□□□□□ -0.31
LINC00511-211ENST00000580948 ARHGEF10O15013 1369 aa13.08□□□□□ -0.31
LINC00511-211ENST00000580948 PLEKHG3A1L390 1219 aa13.08□□□□□ -0.32
LINC00511-211ENST00000580948 SBNO1A3KN83 1393 aa13.07□□□□□ -0.32
LINC00511-211ENST00000580948 ST20-MTHFSA0A0A6YYL1 179 aa13.07□□□□□ -0.32
LINC00511-211ENST00000580948 TESK2Q96S53 571 aa13.07□□□□□ -0.32
LINC00511-211ENST00000580948 BTG4Q9NY30 223 aa13.07□□□□□ -0.32
LINC00511-211ENST00000580948 TOPAZ1Q8N9V7 1692 aa13.07□□□□□ -0.32
LINC00511-211ENST00000580948 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
LINC00511-211ENST00000580948 USP47Q96K76 1375 aa13.07□□□□□ -0.32
LINC00511-211ENST00000580948 BRWD3Q6RI45 1802 aa13.06□□□□□ -0.32
LINC00511-211ENST00000580948 NGDNQ8NEJ9 315 aaKnown RBP13.06□□□□□ -0.32
LINC00511-211ENST00000580948 ACEP12821 1306 aa13.05□□□□□ -0.32
LINC00511-211ENST00000580948 ITSN1Q15811 1721 aa13.05□□□□□ -0.32
LINC00511-211ENST00000580948 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
LINC00511-211ENST00000580948 YY1P25490 414 aa13.04□□□□□ -0.32
LINC00511-211ENST00000580948 FAM182BQ5T319 152 aa13.04□□□□□ -0.32
LINC00511-211ENST00000580948 TRPM3Q9HCF6 1732 aaPredicted RBP13.03□□□□□ -0.32
LINC00511-211ENST00000580948 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
LINC00511-211ENST00000580948 EZH2Q15910 746 aaKnown RBP13.03□□□□□ -0.32
LINC00511-211ENST00000580948 NUTM2GQ5VZR2 741 aa13.03□□□□□ -0.32
LINC00511-211ENST00000580948 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
LINC00511-211ENST00000580948 NWD2Q9ULI1 1742 aa13.02□□□□□ -0.32
LINC00511-211ENST00000580948 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
LINC00511-211ENST00000580948 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
LINC00511-211ENST00000580948 SPATA31A5Q5VU36 1347 aa13.01□□□□□ -0.33
LINC00511-211ENST00000580948 SPATA31A7Q8IWB4 1347 aa13.01□□□□□ -0.33
LINC00511-211ENST00000580948 ABCA3Q99758 1704 aa13.01□□□□□ -0.33
LINC00511-211ENST00000580948 PLCH1Q4KWH8 1693 aa13□□□□□ -0.33
LINC00511-211ENST00000580948 DISP2A7MBM2 1401 aa13□□□□□ -0.33
LINC00511-211ENST00000580948 PUS7Q96PZ0 661 aaKnown RBP13□□□□□ -0.33
LINC00511-211ENST00000580948 CAMKK2Q96RR4 588 aa13□□□□□ -0.33
LINC00511-211ENST00000580948 ALS2Q96Q42 1657 aa12.99□□□□□ -0.33
LINC00511-211ENST00000580948 TRIM37O94972 964 aa12.99□□□□□ -0.33
LINC00511-211ENST00000580948 APBA3O96018 575 aa12.99□□□□□ -0.33
LINC00511-211ENST00000580948 NBPF14Q5TI25 921 aa12.99□□□□□ -0.33
LINC00511-211ENST00000580948 USP6P35125 1406 aa12.98□□□□□ -0.33
LINC00511-211ENST00000580948 CPSF1Q10570 1443 aaKnown RBP12.98□□□□□ -0.33
LINC00511-211ENST00000580948 SSH2Q76I76 1423 aa12.98□□□□□ -0.33
LINC00511-211ENST00000580948 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
LINC00511-211ENST00000580948 PRDM11Q9NQV5 511 aa12.98□□□□□ -0.33
LINC00511-211ENST00000580948 BRD4O60885 1362 aaPredicted RBP12.97□□□□□ -0.33
LINC00511-211ENST00000580948 PARD3Q8TEW0 1356 aa12.97□□□□□ -0.33
LINC00511-211ENST00000580948 CHRNA2Q15822 529 aa12.97□□□□□ -0.33
LINC00511-211ENST00000580948 SLC12A5Q9H2X9 1139 aa12.97□□□□□ -0.33
LINC00511-211ENST00000580948 PPP1R1BQ9UD71 204 aaPredicted RBP12.97□□□□□ -0.33
LINC00511-211ENST00000580948 CD163L1Q9NR16 1453 aa12.97□□□□□ -0.33
LINC00511-211ENST00000580948 RGPD1P0DJD0 1748 aa12.96□□□□□ -0.33
LINC00511-211ENST00000580948 TMF1P82094 1093 aa12.96□□□□□ -0.33
LINC00511-211ENST00000580948 HSPA5P11021 654 aaKnown RBP12.95□□□□□ -0.34
LINC00511-211ENST00000580948 ZC3H6P61129 1189 aaKnown RBP12.95□□□□□ -0.34
LINC00511-211ENST00000580948 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC00511-211ENST00000580948 PDE3BQ13370 1112 aa12.95□□□□□ -0.34
LINC00511-211ENST00000580948 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
LINC00511-211ENST00000580948 SPATA31A1Q5TZJ5 1347 aa12.94□□□□□ -0.34
LINC00511-211ENST00000580948 TMC1Q8TDI8 760 aa12.94□□□□□ -0.34
LINC00511-211ENST00000580948 SPON1Q9HCB6 807 aa12.94□□□□□ -0.34
LINC00511-211ENST00000580948 STRN4Q9NRL3 753 aa12.94□□□□□ -0.34
LINC00511-211ENST00000580948 COL14A1Q05707 1796 aaKnown RBP12.94□□□□□ -0.34
LINC00511-211ENST00000580948 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
LINC00511-211ENST00000580948 NRAPQ86VF7 1730 aa12.93□□□□□ -0.34
LINC00511-211ENST00000580948 USP19O94966 1318 aa12.93□□□□□ -0.34
LINC00511-211ENST00000580948 TTC21BQ7Z4L5 1316 aa12.93□□□□□ -0.34
LINC00511-211ENST00000580948 EVA1CP58658 441 aa12.93□□□□□ -0.34
LINC00511-211ENST00000580948 ABTB2Q8N961 1025 aa12.93□□□□□ -0.34
LINC00511-211ENST00000580948 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
LINC00511-211ENST00000580948 A0A1W2PP64 1363 aa12.93□□□□□ -0.34
LINC00511-211ENST00000580948 KTN1Q86UP2 1357 aaKnown RBP12.93□□□□□ -0.34
LINC00511-211ENST00000580948 KIAA0232Q92628 1395 aa12.93□□□□□ -0.34
LINC00511-211ENST00000580948 USP35Q9P2H5 1018 aa12.92□□□□□ -0.34
LINC00511-211ENST00000580948 AKAP12Q02952 1782 aa12.92□□□□□ -0.34
LINC00511-211ENST00000580948 NRKQ7Z2Y5 1582 aa12.91□□□□□ -0.34
LINC00511-211ENST00000580948 ZBTB7CA1YPR0 619 aa12.91□□□□□ -0.34
LINC00511-211ENST00000580948 KCNQ2O43526 872 aa12.91□□□□□ -0.34
LINC00511-211ENST00000580948 CDCA8Q53HL2 280 aa12.91□□□□□ -0.34
LINC00511-211ENST00000580948 TERF2IPQ9NYB0 399 aa12.91□□□□□ -0.34
LINC00511-211ENST00000580948 TTC21AQ8NDW8 1320 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms