RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 RGPD8O14715 1765 aaPredicted RBP11.95□□□□□ -0.5
SMARCE1-217ENST00000580654 NAIPQ13075 1403 aa11.94□□□□□ -0.5
SMARCE1-217ENST00000580654 RREB1Q92766 1687 aa11.94□□□□□ -0.5
SMARCE1-217ENST00000580654 NUTM2FA1L443 756 aa11.94□□□□□ -0.5
SMARCE1-217ENST00000580654 ZBTB22O15209 634 aa11.94□□□□□ -0.5
SMARCE1-217ENST00000580654 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-217ENST00000580654 CABLES1Q8TDN4 633 aa11.94□□□□□ -0.5
SMARCE1-217ENST00000580654 CCDC9Q9Y3X0 531 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-217ENST00000580654 THSD7AQ9UPZ6 1657 aa11.94□□□□□ -0.5
SMARCE1-217ENST00000580654 ROCK1Q13464 1354 aa11.93□□□□□ -0.5
SMARCE1-217ENST00000580654 PPLO60437 1756 aa11.93□□□□□ -0.5
SMARCE1-217ENST00000580654 LOC105371045A0A1W2PR82 267 aa11.93□□□□□ -0.5
SMARCE1-217ENST00000580654 FAM98CQ17RN3 349 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-217ENST00000580654 NUP188Q5SRE5 1749 aa11.93□□□□□ -0.5
SMARCE1-217ENST00000580654 CCDC144AA2RUR9 1427 aa11.93□□□□□ -0.5
SMARCE1-217ENST00000580654 CAMKK2Q96RR4 588 aa11.92□□□□□ -0.5
SMARCE1-217ENST00000580654 TNS3Q68CZ2 1445 aa11.92□□□□□ -0.5
SMARCE1-217ENST00000580654 FAM83GA6ND36 823 aa11.91□□□□□ -0.5
SMARCE1-217ENST00000580654 KRT28Q7Z3Y7 464 aa11.91□□□□□ -0.5
SMARCE1-217ENST00000580654 A0A0G2JS52 829 aa11.9□□□□□ -0.5
SMARCE1-217ENST00000580654 ADGRB2O60241 1585 aa11.9□□□□□ -0.5
SMARCE1-217ENST00000580654 PRR29P0C7W0 189 aa11.9□□□□□ -0.5
SMARCE1-217ENST00000580654 CLCN6P51797 869 aa11.9□□□□□ -0.5
SMARCE1-217ENST00000580654 MYT1Q01538 1121 aa11.9□□□□□ -0.5
SMARCE1-217ENST00000580654 VGFO15240 615 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-217ENST00000580654 PLEKHG5O94827 1062 aa11.89□□□□□ -0.51
SMARCE1-217ENST00000580654 WAPLQ7Z5K2 1190 aa11.89□□□□□ -0.51
SMARCE1-217ENST00000580654 PLEKHH1Q9ULM0 1364 aa11.89□□□□□ -0.51
SMARCE1-217ENST00000580654 KNDC1Q76NI1 1749 aa11.89□□□□□ -0.51
SMARCE1-217ENST00000580654 IFT172Q9UG01 1749 aa11.89□□□□□ -0.51
SMARCE1-217ENST00000580654 TECPR2O15040 1411 aa11.88□□□□□ -0.51
SMARCE1-217ENST00000580654 COL14A1Q05707 1796 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-217ENST00000580654 CD44P16070 742 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-217ENST00000580654 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-217ENST00000580654 SENP3-EIF4A1A0A087X0R7 540 aa11.87□□□□□ -0.51
SMARCE1-217ENST00000580654 CEP350Q5VT06 3117 aa11.87□□□□□ -0.51
SMARCE1-217ENST00000580654 TRIM37O94972 964 aa11.86□□□□□ -0.51
SMARCE1-217ENST00000580654 ZNF784Q8NCA9 323 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-217ENST00000580654 BTG4Q9NY30 223 aa11.86□□□□□ -0.51
SMARCE1-217ENST00000580654 SBNO1A3KN83 1393 aa11.86□□□□□ -0.51
SMARCE1-217ENST00000580654 NINLQ9Y2I6 1382 aa11.86□□□□□ -0.51
SMARCE1-217ENST00000580654 TRPM3Q9HCF6 1732 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-217ENST00000580654 CRYBG1Q9Y4K1 1723 aa11.86□□□□□ -0.51
SMARCE1-217ENST00000580654 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
SMARCE1-217ENST00000580654 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
SMARCE1-217ENST00000580654 NRXN1Q9ULB1 1477 aa11.85□□□□□ -0.51
SMARCE1-217ENST00000580654 PARD3Q8TEW0 1356 aa11.85□□□□□ -0.51
SMARCE1-217ENST00000580654 ALS2Q96Q42 1657 aa11.84□□□□□ -0.51
SMARCE1-217ENST00000580654 RPGRIP1LQ68CZ1 1315 aa11.84□□□□□ -0.51
SMARCE1-217ENST00000580654 ARHGEF10O15013 1369 aa11.83□□□□□ -0.52
SMARCE1-217ENST00000580654 UTRNP46939 3433 aa11.83□□□□□ -0.52
SMARCE1-217ENST00000580654 APBA3O96018 575 aa11.83□□□□□ -0.52
SMARCE1-217ENST00000580654 STK26Q9P289 416 aa11.83□□□□□ -0.52
SMARCE1-217ENST00000580654 PHF8Q9UPP1 1060 aa11.83□□□□□ -0.52
SMARCE1-217ENST00000580654 KCNQ2O43526 872 aa11.82□□□□□ -0.52
SMARCE1-217ENST00000580654 PSME1Q06323 249 aa11.82□□□□□ -0.52
SMARCE1-217ENST00000580654 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
SMARCE1-217ENST00000580654 SPON1Q9HCB6 807 aa11.82□□□□□ -0.52
SMARCE1-217ENST00000580654 PPP1R1BQ9UD71 204 aaPredicted RBP11.82□□□□□ -0.52
SMARCE1-217ENST00000580654 CASZ1Q86V15 1759 aa11.82□□□□□ -0.52
SMARCE1-217ENST00000580654 ABCC11Q96J66 1382 aa11.81□□□□□ -0.52
SMARCE1-217ENST00000580654 NRKQ7Z2Y5 1582 aa11.81□□□□□ -0.52
SMARCE1-217ENST00000580654 RRBP1Q9P2E9 1410 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-217ENST00000580654 C1QTNF8P60827 252 aa11.81□□□□□ -0.52
SMARCE1-217ENST00000580654 FAM196AQ6ZSG2 479 aa11.81□□□□□ -0.52
SMARCE1-217ENST00000580654 ADGRF5Q8IZF2 1346 aa11.81□□□□□ -0.52
SMARCE1-217ENST00000580654 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
SMARCE1-217ENST00000580654 MYOM1P52179 1685 aa11.8□□□□□ -0.52
SMARCE1-217ENST00000580654 CHD4Q14839 1912 aa11.8□□□□□ -0.52
SMARCE1-217ENST00000580654 TMEM132EQ6IEE7 984 aa11.79□□□□□ -0.52
SMARCE1-217ENST00000580654 SPATA31A1Q5TZJ5 1347 aa11.79□□□□□ -0.52
SMARCE1-217ENST00000580654 ITGAEP38570 1179 aa11.78□□□□□ -0.52
SMARCE1-217ENST00000580654 NBPF8Q3BBV2 869 aa11.78□□□□□ -0.52
SMARCE1-217ENST00000580654 NBPF14Q5TI25 921 aa11.78□□□□□ -0.52
SMARCE1-217ENST00000580654 DCBLD2Q96PD2 775 aa11.78□□□□□ -0.52
SMARCE1-217ENST00000580654 YTHDC2Q9H6S0 1430 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-217ENST00000580654 PMFBP1Q8TBY8 1022 aa11.76□□□□□ -0.53
SMARCE1-217ENST00000580654 RGPD3A6NKT7 1758 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-217ENST00000580654 RGPD4Q7Z3J3 1758 aa11.75□□□□□ -0.53
SMARCE1-217ENST00000580654 PDGFDQ9GZP0 370 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-217ENST00000580654 SIRT1Q96EB6 747 aa11.74□□□□□ -0.53
SMARCE1-217ENST00000580654 PIK3C2GO75747 1445 aa11.74□□□□□ -0.53
SMARCE1-217ENST00000580654 PHRF1Q9P1Y6 1649 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-217ENST00000580654 SBF2Q86WG5 1849 aa11.74□□□□□ -0.53
SMARCE1-217ENST00000580654 ANO8Q9HCE9 1232 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-217ENST00000580654 PEAK1Q9H792 1746 aa11.72□□□□□ -0.53
SMARCE1-217ENST00000580654 SPATA31E1Q6ZUB1 1445 aa11.72□□□□□ -0.53
SMARCE1-217ENST00000580654 ANKARQ7Z5J8 1434 aa11.72□□□□□ -0.53
SMARCE1-217ENST00000580654 PTGER2P43116 358 aa11.72□□□□□ -0.53
SMARCE1-217ENST00000580654 PRDM11Q9NQV5 511 aa11.72□□□□□ -0.53
SMARCE1-217ENST00000580654 KIAA0232Q92628 1395 aa11.71□□□□□ -0.53
SMARCE1-217ENST00000580654 CHRNA2Q15822 529 aa11.71□□□□□ -0.53
SMARCE1-217ENST00000580654 PARP4Q9UKK3 1724 aaKnown RBP11.71□□□□□ -0.54
SMARCE1-217ENST00000580654 ACIN1Q9UKV3 1341 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-217ENST00000580654 BARGINQ6ZT62 677 aa11.7□□□□□ -0.54
SMARCE1-217ENST00000580654 STRN4Q9NRL3 753 aa11.7□□□□□ -0.54
SMARCE1-217ENST00000580654 USP35Q9P2H5 1018 aa11.7□□□□□ -0.54
SMARCE1-217ENST00000580654 PRR36Q9H6K5 1346 aa11.69□□□□□ -0.54
SMARCE1-217ENST00000580654 ZBTB7AO95365 584 aa11.69□□□□□ -0.54
SMARCE1-217ENST00000580654 PDE3BQ13370 1112 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms